Streptomyces drozdowiczii: NEH16_08080
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Entry
NEH16_08080 CDS
T09042
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sdrz
Streptomyces drozdowiczii
Pathway
sdrz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEH16_08080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdrz03019
]
NEH16_08080
03016 Transfer RNA biogenesis [BR:
sdrz03016
]
NEH16_08080
Enzymes [BR:
sdrz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NEH16_08080
Messenger RNA biogenesis [BR:
sdrz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NEH16_08080
Transfer RNA biogenesis [BR:
sdrz03016
]
Prokaryotic type
tRNA degradation factors
NEH16_08080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
CdsD_C
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
UZK58427
LinkDB
All DBs
Position
complement(1831760..1833973)
Genome browser
AA seq
737 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKRPKDN
LDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASASTILAGLPFSGPIGATRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEVVAAGLEAAKPFIKVLC
KAQSDLAAKAAKPTGEFPVFLDYQDDVLEALTKAVSTELAKALTIAGKQERETELDRIKE
IAAEKLLPAFEGREKEISGAYRALTKKLVRERVIKDKVRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAAVAGIAMGLISQEIDGKTHYVALTDILGAEDAYGDMDFKVAGTKQFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAQQGSQAEAARATINAIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDSRGKLSL
IPVIEGEEDEKKDDTDK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaagccgtcatcgacaacggcaccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcttccaagcggcccaaggacaac
ctcgacttcttccccctcacggtggacgtcgaggagcggcagtacgccgccggcaagatc
cccggctccttcttccgccgggagggccgcccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccctccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctgtacgacgtggtcgcgatcaacgcc
gcctccgcctccacgatcctggcgggcctgcccttctccggcccgatcggcgccacccgc
gtcgccctgatcaagggccagtgggtcgccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgcgggccgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctcgtcaaggacggcgccgaggccccg
accgaagaggtcgtcgccgccggtctggaagccgccaagcccttcatcaaggtgctctgc
aaggcccagtcggacctcgccgccaaggccgccaagcccaccggcgagttcccggtcttc
ctggactaccaggacgacgtcctggaggccctcaccaaggccgtcagcaccgagctggcc
aaggcgctcaccatcgccggcaagcaggagcgcgagacggagctcgaccgcatcaaggag
atcgcggccgagaagctcctcccggccttcgagggccgcgagaaggagatctccggtgcc
taccgcgcgctgaccaagaagctggtccgcgagcgcgtcatcaaggacaaggtccgcatc
gacggccgcggcgtcacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctccgccctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggcgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggcgcgctcgccgagcgcgcgatcgtgccggtgctcccg
tcgcgcgaggagttcccctacgcgatccgccaggtctccgaggccctcggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtccctgctgaacgccggtgtgccc
ctcaaggccgccgtcgccggcatcgccatgggcctgatctcccaggagatcgacggcaag
acccactacgtcgccctcaccgacatcctcggtgccgaggacgcgtacggcgacatggac
ttcaaggtcgccggtacgaagcagttcgtcaccgcgctccagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgcgacgcccgcctccac
atcctcgacgtgatgaacgaggccatcgacgtcccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgcccagcagggctcgcaggccgaggccgcccgcgccacgatcaac
gcgatcgccaacccgaccatgccggaggtcggcgagcgctacctgggtacggtcgtcaag
accaccaccttcggtgcgttcgtctcgctcatgccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctggccggcggcaagcgcgtggagaacgtcgaggacgttctcggc
gtcggcgccaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctc
atccccgtcatcgagggcgaagaggacgagaagaaggacgacaccgacaagtga
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