Streptomyces drozdowiczii: NEH16_10500
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Entry
NEH16_10500 CDS
T09042
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdrz
Streptomyces drozdowiczii
Pathway
sdrz03420
Nucleotide excision repair
sdrz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NEH16_10500
03430 Mismatch repair
NEH16_10500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdrz03400
]
NEH16_10500
Enzymes [BR:
sdrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NEH16_10500
DNA repair and recombination proteins [BR:
sdrz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NEH16_10500
MMR (mismatch excision repair)
Other MMR factors
NEH16_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UZK54514
LinkDB
All DBs
Position
complement(2378454..2381711)
Genome browser
AA seq
1085 aa
AA seq
DB search
MSPRLTDPEQLKELLGIPFTPEQTACITAPLAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVAAGITDPDVIDPDNPPGEPGISTYHAFAGRLL
TEHGLRIGLEPGTRLLADATRYQLAARVLREAPGPYPALTRSFPTLVSDLLALDAELAEH
LVRPEQLDAYDTELLTALETAKLSNEELRKIPATAEARRELLALTRRYRDAKRSRDLLDF
GDQIALSAELALTRPEVGAILRAEYRVVLLDEYQDTSVAQRLLLSALFGSGPGADGPTGH
AVTAVGDPCQAIYGWRGASVANLDDFPSHFPHADGTPATRYALSENRRSGGRLLHLANGL
AAPLRAMHEGVEALRPAPGAERDGLVRCALLPTHTEEIGWLADSIAHLVRTGKAPGEIAV
LCRTAGDFPEIQAALVARDIPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLT
GPRWRIGPRDLALLGRRARLLVHRAAHGDDEDYDPDRRLAEAVEGIDPAEVISLADALDT
FLDGGGEEDDRLPFSAEARVRFARLAAELRDLRRSLADPLMDVLHRVLATTGLEVELSAS
PQALAARRRETLGNFLDVAARFAAVDGEATLLAFLGFLRTAVQYEKGLDNALPGGENTVK
VLTAHKSKGLEWDVVAVPGLVTGQFPSGQSRDAWTSQAKVLPHALRGDTATLPALRGYDA
KGLKGFKEEMKEHQHTEELRLGYVTFTRPRTLLLGSGHWWGPTQKKPRGPSAFLHALYEH
CAAGYGEIEVWADAPAETDENPALTEASADHAWPLPLDDTALARRRAAADTVMELLARPE
APADAPEVPAPRLTPEETRTLASWDRDLDALAGELRRARATVRDVLVPASLSATQLLRLA
DDPDAFARELARPMPRPPQPAARRGTRFHAWVESRFEELPLPMLGPDELPGGDGSDADIA
DERDLADLKEAFERTPYARRTPYRVETPFQITLAGRIIRGRIDAVYRTGDTYEIVDWKTG
RTHTADPLQLAVYRLAWAELHGLPLTDVTATFLFVRTGEAVRPASLPGRPELERILLDEP
LPSDG
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccgcgcctcaccgatcccgagcagctcaaggagctgctgggcatccccttcacc
ccggagcagacggcctgcatcaccgcgccgctcgccccgcaggtgatcgtggccggagcc
gggtcggggaagaccacggtgatggccgcccgcgtggtctggctggtcggcaccggccag
gtcgcccccgagcaggtcctcgggctcaccttcaccaacaaggcggccggtgagctggcc
gagcgcgtacgcaaggcactcgtcgccgccgggatcaccgacccggacgtgatcgacccg
gacaaccccccgggcgaacccggcatctccacgtaccacgccttcgccgggcggctgctc
accgagcacggcctgcgcatcggcctcgaaccgggcacccgcctcctcgccgacgccacc
cgctaccagctcgccgcccgcgtgctgcgcgaggcccccggcccctacccggccctgacc
aggtccttccccaccctcgtcagcgacctgctggccctcgacgccgagctggccgaacac
ctcgtacgccccgaacagctcgacgcgtacgacaccgaactgctgaccgcgctggagacc
gcgaagctcagcaacgaagagctgcgcaagatcccggcgaccgccgaggcccgccgcgaa
ctgctcgcgctgacccggcgctaccgcgacgcgaagcggagccgcgacctcctcgacttc
ggcgaccagatcgccctctccgccgagctggccctcacccgccccgaggtcggcgcgatc
ctccgcgccgaataccgggtcgtcctgctcgacgaataccaggacacctccgtcgcccag
cgcctcctgctctccgccctcttcggcagcggccccggcgcggacgggccgaccgggcac
gccgtcaccgccgtcggcgacccctgccaggccatctacggctggcgcggcgcctccgtc
gccaacctggacgacttcccgagccacttcccgcacgccgacggcacccccgcgacccgc
tacgccctcagcgagaaccgccgcagcggcggccgcctcctccacctcgccaacggactc
gccgcacccctgcgcgccatgcacgagggcgtcgaggccctgcgccccgcccccggcgcc
gagcgcgacggactggtccgctgcgccctgctgcccacccacaccgaggagatcggctgg
ctcgcggactcgatcgcccacctcgtgcgcaccggcaaggcgccgggcgagatcgccgtc
ctgtgccgcaccgccggtgacttcccggagatccaggccgcgctggtcgcccgcgacatc
ccggtcgaggtcgtcggcctctccgggctgctccacctccccgaggtcgcggacctcgtc
gccgtctgcgaggtcctccaggacccgggcgccaacgcatcgctggtccgcctgctcacc
ggcccccgctggcggatcggcccgcgcgacctggccctgctcggccgccgggcccgcctc
ctggtgcaccgcgccgcccacggcgacgacgaggactacgaccccgaccgcaggctcgcc
gaggccgtcgaggggatcgacccggccgaggtgatctccctcgccgacgccctggacacc
ttcctggacggcggcggcgaggaggacgatcggcttccgttctccgccgaggcccgcgtc
cgcttcgcgcgcctcgccgccgaactgcgcgacctgcgccgctcgctcgcggatcccctg
atggacgtcctgcaccgggtcctcgccaccaccggcctggaggtcgagctctccgcctcc
ccgcaggccctggccgcccgccgccgcgagaccctgggcaatttcctcgacgtcgccgcc
cgcttcgccgccgtcgacggcgaggccacgctgctcgccttcctcggcttcctgcgcacc
gccgtccagtacgagaagggcctcgacaacgcgctgcccggcggcgagaacaccgtcaag
gtcctcaccgcccacaagtccaagggcttggagtgggacgtcgtcgccgtgcccggcctg
gtcaccggccagttccccagcggccagtcccgggacgcctggacctcccaggccaaggtc
ctcccgcacgccctgcgcggcgacaccgccaccctccccgccctccgcggctacgacgcc
aagggcctcaagggcttcaaggaggagatgaaggagcaccagcacacggaggagctgcgc
ctcggctacgtcaccttcacgcgcccccgcacgctgctgctcggctccggccactggtgg
gggcccacccagaagaagccgcgcggcccgtccgccttcctgcacgcgttgtacgagcac
tgcgccgcagggtacggcgagatcgaggtgtgggcggacgccccggcggagaccgacgag
aacccggccctgaccgaggcgtccgccgaccacgcctggccgctcccgctggacgacacc
gccctggcccgccgcagggccgccgcggacacggtcatggagctgctggcccggccggag
gccccggccgatgccccggaggtcccggctccccgcctcacccccgaggagacgcgcacc
ctcgcctcctgggaccgggacctcgacgcgctggccggggagctgcgccgggcccgcgcc
accgtgcgcgacgtcctcgtccccgcctcgctctccgccacccagttgctgcgcctcgcc
gacgaccccgacgccttcgcccgggagctggcccggcccatgccccgcccgccgcagccc
gccgcccgccggggcacccgcttccacgcctgggtggagtcccggttcgaggagctgccg
ctgcccatgctcggccccgacgagctgcccgggggcgacgggagcgacgccgacatcgcc
gacgagcgcgacctcgccgacctgaaggaagccttcgagcgcaccccgtacgcccgccgc
accccgtaccgggtggagacgccgttccagatcaccctggccggccggatcatccggggc
cgtatcgacgccgtgtaccgcacgggggacacgtacgagatcgtggactggaagaccggc
cgcacccacaccgccgaccccctccagctcgccgtgtaccggctggcctgggccgagctg
cacggactcccgctcaccgacgtcacggccaccttcctcttcgtccgcaccggcgaggcc
gtccgcccggcctccctgccgggccgtccggagctggagcgcatccttctggacgagcca
cttccgtcggacggataa
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