Streptomyces drozdowiczii: NEH16_12360
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Entry
NEH16_12360 CDS
T09042
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sdrz
Streptomyces drozdowiczii
Pathway
sdrz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEH16_12360 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdrz03019
]
NEH16_12360 (groL)
03110 Chaperones and folding catalysts [BR:
sdrz03110
]
NEH16_12360 (groL)
03029 Mitochondrial biogenesis [BR:
sdrz03029
]
NEH16_12360 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdrz04147
]
NEH16_12360 (groL)
Enzymes [BR:
sdrz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NEH16_12360 (groL)
Messenger RNA biogenesis [BR:
sdrz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NEH16_12360 (groL)
Chaperones and folding catalysts [BR:
sdrz03110
]
Heat shock proteins
HSP60 / Chaperonin
NEH16_12360 (groL)
Mitochondrial biogenesis [BR:
sdrz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NEH16_12360 (groL)
Exosome [BR:
sdrz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NEH16_12360 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NEH16_12360 (groL)
Exosomal proteins of breast cancer cells
NEH16_12360 (groL)
Exosomal proteins of colorectal cancer cells
NEH16_12360 (groL)
Exosomal proteins of bladder cancer cells
NEH16_12360 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UZK54821
UniProt:
A0ABY6PRS2
LinkDB
All DBs
Position
complement(2785597..2787222)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
LDDPYENLGAQLVKEVATKTNDVAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSEELLATARPIDDKSDIAAVAALSAQDPQVGELIADAMDKVGKDGVITVEESNT
FGLDLDFTEGMAFDKGYLSPYMVTDQERMEAVLDDPYILIHQGKIGSIQELLPLLEKVIQ
AGGSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDIATLTGATV
IAEEVGLKLDQAGLDVLGTARRVTVTKDDTTIVDGGGKSDEVAGRVNQIKAEIEATDSDW
DREKLQERLAKLAGGVCVIRVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSAIV
HAVKVLEGNLGKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKPAEEEPEAAGHGHGHS
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggtgcccccaccatcaccaacgacggtgtcaccatcgcgcgcgaggtcgag
ctggacgacccgtacgagaacctcggtgcccagctggtgaaggaggtcgccaccaagacg
aacgacgtcgcgggtgacggcaccaccaccgccaccgtcctcgcccaggcgctcgtccgc
gagggtctgcgcaacgtcgccgccggcgcctccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtctccgaggagctcctcgcgaccgcccgcccgatcgacgacaag
tccgacatcgccgccgtggccgcgctctccgcgcaggacccgcaggtcggcgagctcatc
gcggacgcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggacctcgacttcaccgagggcatggccttcgacaagggctacctgtccccg
tacatggtgaccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
caccagggcaagatcggctcgatccaggagctgctgccgctcctggagaaggtcatccag
gctggtggctccaagccgctcctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtcgtcaacaagattcgcggcacgttcaacgccgtcgccgtcaaggcgccgggc
ttcggtgaccgccgcaaggccatgctcggcgacatcgccaccctcacgggtgcgaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctgggcaccgcc
cgccgcgtgaccgtcaccaaggacgacaccaccatcgtcgacggtggcggcaagtccgac
gaggtcgccggccgcgtcaaccagatcaaggccgagatcgaggccacggactccgactgg
gaccgcgagaagctccaggagcgcctggcgaagctggccggcggggtctgcgtgatccgc
gtcggtgccgccaccgaggtcgagctcaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgccatcgtc
cacgccgtcaaggtcctcgagggcaacctcggcaagaccggcgacgaggccaccggtgtc
gcggtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctacgtcatcacctcgaaggtcgccgagctcgacaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcgtccatcgcgtcgctgctgctcacgaccgagaccctg
gtcgtcgagaagccggccgaggaagagccggaggccgcgggccacggccacggccactcg
cactaa
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