Streptomyces drozdowiczii: NEH16_12545
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Entry
NEH16_12545 CDS
T09042
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sdrz
Streptomyces drozdowiczii
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdrz03016
]
NEH16_12545 (truA)
Enzymes [BR:
sdrz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NEH16_12545 (truA)
Transfer RNA biogenesis [BR:
sdrz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NEH16_12545 (truA)
Prokaryotic type
NEH16_12545 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Rod_cone_degen
Motif
Other DBs
NCBI-ProteinID:
UZK54852
UniProt:
A0ABY6PRZ9
LinkDB
All DBs
Position
complement(2819774..2820628)
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AA seq
284 aa
AA seq
DB search
MSDEVEPGFVRVRLDLAYDGKDFSGWAKQTARRTVQGEIEDALRTVTRSSRTYDLTVAGR
TDAGVHARGQVAHVDLPEEVWAEHAEKLLRRLAGRMAPDVRVWRIKEAPPGFNARFSALW
RRYAYRVADRPGGVDPLVRGHVLWHDRPLDVAAMNAAAARMTGEHDFAAYCKKREGATTI
RTLQKLHWVRDAETGIITGTVQADAFCHNMVRALVGAMLFVGDGRRPDPWPAEVLAAAVR
DPGVHVVRPHGLTLEEVAYPADELLAARAVEARNVRTLPGAGCC
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgaggtggagcccggcttcgtacgggtacggctggacctggcctacgacggc
aaggacttctcgggctgggcgaagcagaccgcgcggcggacggtccagggcgagatcgag
gatgcgctgcggaccgtgacccgctcctcacgcacgtacgacctgacggtggccggccgc
accgacgccggggtgcacgcccggggccaggtcgcccacgtcgacctgccggaagaggtg
tgggccgagcacgccgagaagctgctgcggcggctcgccgggcggatggcccccgatgtg
cgggtctggcggatcaaggaggcaccgccggggttcaacgcccggttctccgcgctgtgg
cgccgttacgcgtaccgcgtcgccgaccgccccggcggcgtcgaccccctcgtccggggc
catgtgctctggcacgaccggccgctggacgtggccgcgatgaacgccgcagcggcgcgg
atgaccggggagcacgacttcgcggcgtactgcaagaagcgcgagggcgcgacgacgatc
cggacgctccagaagctgcactgggtgcgcgacgcggagaccgggatcatcaccgggacc
gtgcaggcggacgccttctgccacaacatggtgcgggccctcgtcggggcgatgctcttc
gtgggcgacgggcggcgccccgatccgtggccggccgaggtgctggccgccgccgtgcgc
gaccccggggtgcatgtggtgcgcccgcacgggctgacgctggaggaggtcgcgtatccg
gcggacgagctgctggcggcgcgcgcggtggaggcgcgcaatgtgcggacgctccccggg
gcgggctgctgctag
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