Streptomyces drozdowiczii: NEH16_21960
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Entry
NEH16_21960 CDS
T09042
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sdrz
Streptomyces drozdowiczii
Pathway
sdrz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NEH16_21960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdrz02000
]
NEH16_21960
Transporters [BR:
sdrz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NEH16_21960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
AAA_22
AAA_23
AAA
RsgA_GTPase
MMR_HSR1
AAA_30
TsaE
DUF4199
nSTAND3
AAA_29
NB-ARC
DO-GTPase2
DUF87
BAMBI_C
SRP54
AAA_28
cobW
ATP_bind_1
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UZK56400
LinkDB
All DBs
Position
complement(4841834..4843765)
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AA seq
643 aa
AA seq
DB search
MAGPGGRMMAGGAPTERSMDFKGSSKRLLRRFAVEKNTLYVMLVAVACSVGLSVVGPKIL
GKATDLVFAGVIGRSMDSGTTKEQAVEGLRRSNSGLADMLSGVDFTPGRGIDFGAVGNVL
LVALAVYVGAGLLMLVSTRLSIRIINRVVFQLREDIQTKLSRLPLSYFDRAKRGEVLSRA
TNDIDNISQTMQQTMGQLINSLLTIIGVLVMMFWISPLLALVALVTVPLSVVVATKVGKR
SQPQFVQQWKVTGKLNAHIEEMYTGHTLVKVFGRQEESAKDFAEQNEALYEAGFKAQFNS
GIMQPLMMFVSNLNYVLIAVVGGLRVASGSLSIGDVQAFIQYSRQFSMPLTQVASMANLV
QSGVASAERIFELLDAEEQDADPAKGEGEHPGVLRGSVALEHVSFRYDPEKPLIEDLSLN
VEPGHTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVDIAKMSRADLRSGIGMVLQD
TWLFGGTIAENIAYGASGDVGRERIEEAARAAHADRFIRTLPDGYDTVIDDEGTGVSAGE
KQLITIARAFLSDPVILVLDEATSSVDTRTEVLIQKAMAGLAHGRTSFVIAHRLSTIRDA
DVILVMENGSIVEQGTHDELLDAKGAYARLYAAQFAQAVAEVD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcctggcggacgcatgatggcgggcggggcgccgaccgagcggtccatggac
ttcaaggggtcctcgaagcggctgctgaggcgcttcgccgtcgagaagaacaccctgtac
gtgatgctggtcgcggtcgcgtgcagcgtcgggctctccgtggtcggcccgaagatcctc
ggcaaggcgaccgacctggtcttcgccggggtcatcggccggtccatggactccgggacg
accaaggagcaggccgtcgagggcctgcgcaggagcaacagcggcctggccgacatgctg
tccggggtggacttcacgccgggccggggcatcgacttcggcgcggtcggcaacgtcctg
ctggtggcgctggcggtgtacgtcggcgcggggctgctgatgctggtgtcgacgcggctg
tcgatccggatcatcaaccgggtcgtgttccagctgcgtgaggacatccagacgaagctg
tcgcggctgccgctctcgtacttcgaccgtgccaagcgcggcgaggtgctgagccgggcg
acgaacgacatcgacaacatctcgcagacgatgcagcagacgatgggccagctcatcaac
tccctgctgacgatcatcggcgtgctggtgatgatgttctggatctcgccgctgcttgcg
ctggtcgcgctggtgaccgtgccgctgtcggtggtcgtggcgacgaaggtcggcaagcgc
tcgcagccgcagttcgtgcagcagtggaaggtcaccggcaagctcaacgcccacatcgag
gagatgtacaccgggcacaccctggtgaaggtattcggccggcaggaggagtccgcgaag
gacttcgccgagcagaacgaggcgctgtacgaggccgggttcaaggcgcagttcaacagc
gggatcatgcagccgctgatgatgttcgtgtcgaacctgaactacgtgctgatcgccgtg
gtcggcgggctccgggtcgcgtccggttcgctgtcgatcggtgatgtgcaggcgttcatc
cagtactcgcggcagttctcgatgccgctgacccaggtcgcctcgatggccaacctggtg
cagtccggggtcgcgtcggcggagcggatcttcgagctgctggacgccgaggagcaggac
gccgacccggcgaagggcgagggcgagcaccccggcgtcctgcgcggcagcgtcgctctg
gagcatgtctccttccgctacgacccggagaagccgctcatcgaggacctgtcgctgaac
gtcgaaccgggccacacggtcgcgatcgtcggcccgacgggcgccggcaagacgacgctg
gtcaacctgctgatgcggttctacgaggtgacgggcggccggatcacgctggacggcgtg
gacatcgcgaagatgtcccgggcggacctgcgctccggcatcggcatggtcctccaggac
acctggctgttcggcgggaccatcgccgagaacatcgcctacggggcctccggcgacgtc
ggccgggagcggatcgaggaggcggcgagggcggcccacgccgaccgcttcatccggacc
ctgccggacggttacgacacggtgatcgacgacgagggcaccggcgtcagcgcgggcgag
aagcagctgatcaccatcgcgcgggcgttcctgtccgacccggtgatactcgtgctggac
gaggcgaccagctccgtcgacacccggaccgaggtgctgatccagaaggcgatggcgggt
ctggcgcacggccgtaccagcttcgtgatcgcgcaccggctctccaccatccgggacgcc
gacgtcatcctggtcatggagaacggctcgatcgtggagcagggcacgcacgacgaactg
ctggacgcgaagggcgcctacgcccggctgtacgcggcgcagttcgcccaggcggtcgcc
gaggtcgactga
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