Streptomyces drozdowiczii: NEH16_27450
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Entry
NEH16_27450 CDS
T09042
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sdrz
Streptomyces drozdowiczii
Pathway
sdrz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NEH16_27450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdrz03400
]
NEH16_27450
Enzymes [BR:
sdrz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NEH16_27450
DNA repair and recombination proteins [BR:
sdrz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NEH16_27450
Prokaryotic type
NEH16_27450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UZK57327
LinkDB
All DBs
Position
6030668..6031351
Genome browser
AA seq
227 aa
AA seq
DB search
MTDTDLLPESWRGVLGEELQKPYFKELTEFVEEERAAGPVYPPREQVFAALEATPYDKVK
VLVLGQDPYHGEGQGHGLCFSVRPGVKTPPSLRNIYKEMQEELGLPVPDNGYLMPWAEQG
VLLLNAVLTVRAGEANSHKGKGWEKVTDAVIRAVAARPDPAVFVLWGNYAQKKLPLIDTE
RHVVVKGAHPSPLSAKKFFGSRPFTQINEAVAQQGHQPIDWRIPDLG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaccgacctgctgcccgagtcctggcgcggcgtcctcggcgaagagctgcag
aagccgtacttcaaggagctcaccgagttcgtcgaggaggagcgcgccgccggaccggtc
tacccgccccgggagcaggtgttcgcggccctcgaagcgaccccgtacgacaaggtgaag
gtcctggtcctcgggcaggacccctaccacggcgagggccaggggcacggcctctgcttc
tccgtgcggccgggcgtgaagaccccgccctcgctgcgcaacatctacaaggagatgcag
gaggagctgggcctgcccgtcccggacaacggctatctgatgccgtgggccgagcagggc
gtcctgctgctcaacgccgtgctcaccgtccgcgcgggcgaggccaactcgcacaagggc
aagggctgggagaaggtgaccgacgcggtgatccgggccgtcgccgcccgccccgacccg
gcggtcttcgtcctctggggcaactacgcgcagaagaagctccccctgatcgacaccgag
cgccatgtggtggtgaagggtgcccacccctcgccgctgtccgcgaagaagttcttcggc
tcccgccccttcacccagataaacgaggccgtcgcccagcagggccaccagcccatcgac
tggcgcatccccgacctgggctga
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