Streptococcus dysgalactiae subsp. equisimilis GGS_124: SDEG_2002
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Entry
SDEG_2002 CDS
T00932
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sds
Streptococcus dysgalactiae subsp. equisimilis GGS_124
Pathway
sds03030
DNA replication
sds03410
Base excision repair
sds03420
Nucleotide excision repair
sds03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sds00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SDEG_2002
03410 Base excision repair
SDEG_2002
03420 Nucleotide excision repair
SDEG_2002
03440 Homologous recombination
SDEG_2002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sds03032
]
SDEG_2002
03400 DNA repair and recombination proteins [BR:
sds03400
]
SDEG_2002
Enzymes [BR:
sds01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SDEG_2002
DNA replication proteins [BR:
sds03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SDEG_2002
DNA repair and recombination proteins [BR:
sds03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SDEG_2002
NER (nucleotide excision repair)
GGR (global genome repair) factors
SDEG_2002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BAH82484
LinkDB
All DBs
Position
1:complement(1934223..1936865)
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AA seq
880 aa
AA seq
DB search
MENKNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLEHMMKRVQPTHV
LVAFDAGKTTFRTEMYADYKAGRAKTPEEFREQFPYIREMLTALGIAYYELEHYEADDII
GTLDKMAERTEVPFDVTIVSGDKDLIQLTDENTVIEISKKGVAEFEEFTPAYLMEKMGLT
PNQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSLEGIYEHVEGFKASKMKENLLN
DRDQAFLSKTLATINTASPITIGLDDIVYNGPDVASLSKFYDEMDFVQLKKGLASQMPQE
AIAAVSYQEVTSLSDDLFSDEDIFYFEVLRDNYHREDIIGFAWGHGEQIYASTDLSLLST
DLFKKVFEKPIATYDFKRSKVLLSHLGIELVAPSYDARLANYLLSNVEDNELTTIARLFT
DISLEADDSIYGKGVKRAVPEKEVLLGHLARKVKVLLDSRAPMVEKLADHDQIDLYHEIE
LPLANVLAKMEIEGIKVNRATLQDMAEQNKVIIEALTQEIYDMAGQEFNINSPKQLGSIL
FEKMQLPLEMTKKTKTGYSTAVDVLERLAPIAPIVAKILDYRQITKLQSTYVIGLQDYIL
ADGKIHTRYVQDLTQTGRLSSVDPNLQNIPIRLEQGRLIRKAFTPSHEDAVLLSSDYSQI
ELRVLAHISGDEHLIAAFNEGADIHTSTAMRVFGIDKAADVTANDRRNAKAVNFGIVYGI
SDFGLSNNLGITRKQAKSYIDTYFERYPGIKAYMENVVREAKDKGYVETLFKRRRELPDI
NSRNFNVRSFAERTAINSPIQGSAADILKIAMINLDNALQAGGFKAKMLLQVHDEIVLEV
PNDELTAIKKLVKDTMEAAVDLAVPLRADENAGQSWYEAK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaagaataaattactgttaattgatgggtcatctgttgcctttcgtgccttt
tttgccctctacaatcaaatcgaccgttttaaaaatcatagcggtcttcataccaatgcc
atttatggctttcatttgatgttagagcacatgatgaagcgagtccagcccacacacgtg
ctggtggcttttgatgcgggcaaaaccaccttccggacagaaatgtatgcagactacaag
gctggtcgcgccaagacaccagaggagtttcgtgagcaatttccttatattcgtgagatg
ttgacagcccttggtattgcttattatgagttggaacattacgaagccgatgatattatt
gggacgcttgataaaatggcggagcgcacagaagtgccttttgatgtgaccattgtcagt
ggtgataaagatttgatccagttaactgacgaaaataccgtgattgaaatttctaaaaaa
ggggttgccgaatttgaagaattcacaccggcttacctcatggaaaaaatgggcttgacg
ccaaaccagtttattgacctcaaagccttgatgggagataaatcggataatattccagga
gtgaccaaaatcggtgaaaaaactgggctcaagctccttcatgaatttggtagtttagaa
ggtatctacgagcacgttgaaggtttcaaagcttccaaaatgaaagaaaacttgctcaat
gatcgtgaccaagcttttctgtctaaaacgctcgccactatcaatacagcatctcctatc
acaattggcttagatgatattgtctacaatggtcctgatgttgctagtctgtctaagttt
tacgatgaaatggattttgtccaactgaaaaaaggtttggcgagtcagatgcctcaagaa
gctatcgccgctgtttcttaccaagaagttacttccctctctgatgatctttttagtgat
gaggacatcttctactttgaagtgcttcgggataattatcatcgtgaggacatcattggc
tttgcatggggacacggggagcagatttatgcgtcaactgacctcagcttgttatcaact
gaccttttcaaaaaggtttttgaaaaaccaattgccacctatgactttaagcgtagcaag
gtcttgttgagccacttaggaattgagttggtagcacctagctatgatgctagattggct
aactaccttctttcaaatgtggaagacaatgaactcactactattgcaaggcttttcacc
gacatttccctagaagcagatgacagcatttatggcaagggtgtcaaaagagctgttcct
gaaaaagaggttctgcttgggcatttagcccgcaaagtcaaggttcttttggatagtaga
gcgcctatggtggagaaattagctgaccatgatcaaattgatctttaccatgagattgag
ttaccgttagcgaacgttcttgctaaaatggaaattgaagggatcaaggttaatagggcg
actttgcaagatatggcagagcaaaacaaggtcattattgaagcgctcacccaagagatt
tatgatatggctggccaagaatttaatatcaattcgcctaaacagctgggcagtatcttg
tttgagaagatgcagttacctcttgagatgactaagaagaccaaaacaggttattctaca
gctgttgatgttttggaacgtttggcaccgattgctccaattgtggctaaaattttggat
tatcgccaaattactaaattgcaatccacctatgtgattggtttacaggattatattctg
gctgatggcaagattcatacccgctatgtgcaggatctcacccagacaggtcgtttgtct
agtgttgaccctaacctccaaaacattcccattcgtttggaacaggggcgtttgattcgt
aaggcctttaccccatctcatgaagatgccgtcttgttgagttcagattactcacagatt
gaattgcgggtactggcacatatttcaggggatgagcatttgattgctgcctttaatgaa
ggggcagacattcatacctcaacggctatgcgtgtgtttgggattgacaaggcagcagat
gttactgccaatgaccgccgtaatgccaaggctgttaattttggtatcgtctatgggatt
tcggattttggtttgtcaaataaccttggtatcacccggaaacaggccaagtcttacatt
gatacctattttgaacgctatcctggcatcaaagcctatatggaaaatgtcgttcgtgag
gctaaagacaagggctatgtggaaaccctctttaagcgtcgtcgtgaattaccggatatc
aactctcgtaatttcaacgttcgctcttttgcggagcgtacagccatcaactcgcccatt
caagggagcgcagctgatattctcaaaatcgctatgattaacctggacaacgccttgcaa
gcaggtggttttaaagctaaaatgctccttcaagtgcacgatgaaatcgttttggaagtg
ccaaatgatgagttgactgctataaaaaaacttgtcaaagacaccatggaagctgctgtt
gatttagctgttcctttacgcgcagatgaaaatgcaggacagagctggtacgaagccaag
taa
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