Staphylococcus pseudintermedius ED99: SPSE_0048
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Entry
SPSE_0048 CDS
T02008
Name
(GenBank) deoxyribodipyrimidine photolyase, putative
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sdt
Staphylococcus pseudintermedius ED99
Brite
KEGG Orthology (KO) [BR:
sdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdt03400
]
SPSE_0048
Enzymes [BR:
sdt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SPSE_0048
DNA repair and recombination proteins [BR:
sdt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SPSE_0048
Prokaryotic type
SPSE_0048
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
RNase_H_2
DUF5358
Motif
Other DBs
NCBI-ProteinID:
ADX75397
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All DBs
Position
complement(57967..59391)
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AA seq
474 aa
AA seq
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MHLGVILNRVFRINHNPLLDYVITHQDEIKQLYLILPIEDLSDAATVKREDYHHVVKGFV
STLIKHNIHPYIVDYKNLDTLANALSLSHVLMAKDIMSYHRASYDYPHMKKRFEKHHISV
IGQRVNHYFQPSKTFNQQHQPYQIFTYFYKANRQHLAHTPQKSTQLKQLAQYAAKGMNQS
DLKFDKHTDEEACARQSWNHFLNHEITLYSQLADDITRNNISGLSRYLAYGLLDIREVIN
HLLEGYDSDENSYESFIRELMFREFYYVLMTQYPDAATQSFSVKYRNMEWSERQSHFEAW
KNGETGYPIIDAAMKKLLRTGYMHNRLRMIVSQFLTKHLFMNWTWGEAHFRRYLIDYDNA
SNVHGWQWSASTGTDAVPYFRMFNPIRQSERFDAMGDFIKEQLQILKDVKPKYIHNPSQY
VTAIQQNHQIKIGEDYPKAIVNHKESRDYVMQQFKQYTNYKNGNHHENDINIDF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcacttaggcgtcatactaaacagggtttttagaatcaatcataaccctcttcttgat
tatgtcattacacatcaagacgaaataaagcaactatatttgatattacctatagaagat
ttgagtgatgcggctacagtaaaacgcgaggattatcatcatgtcgtaaaagggtttgta
agtaccctcattaaacacaatatacacccttatattgttgattataaaaatttggataca
ttagcgaatgcgttatcactctctcacgtattgatggccaaagacattatgagttatcac
agagcaagttatgactatcctcatatgaaaaaacggtttgaaaagcatcacatttcggtc
attggtcaacgtgtcaatcactactttcagccatcaaagacttttaaccagcaacaccaa
ccttatcaaatatttacatacttttataaagccaatcgccaacatctagctcatacacct
caaaaaagcacgcaactgaagcaattagcacaatatgctgccaaaggaatgaaccaaagt
gatttaaaatttgacaaacacacagatgaagaagcctgtgcacgtcaatcctggaatcat
tttttgaatcatgagattaccctttattctcaattagcagatgatatcactcgaaataat
atcagtggtttaagcaggtatttagcttatggtttactcgatattcgagaagtcatcaat
catttacttgaaggatatgacagtgatgaaaatagttatgagtctttcatcagagaactc
atgtttcgtgaattttattatgtattaatgacacaatatccagatgccgcgacacaatct
ttttctgtcaagtatcggaatatggaatggtctgagcgtcagtctcattttgaagcttgg
aaaaatggagaaaccggttatcctattatcgatgcagcaatgaaaaaactccttcgtaca
gggtatatgcataatcgcttacgtatgatagtgtctcaatttttaacaaaacatctattt
atgaactggacttggggagaagcacattttagacgctatttgatagactacgataatgct
tcgaatgtacatggttggcaatggtctgcatctaccggaacagatgccgtcccttatttc
agaatgttcaatcctatacgtcaaagtgaacgttttgacgcaatgggtgattttattaaa
gaacagttacaaatattgaaagacgtaaagcctaagtatattcacaatccctctcaatat
gtaacagcaatacaacaaaatcatcaaataaaaattggggaagattatccaaaagccatc
gtaaaccataaagagagtagagattatgtgatgcaacaattcaagcaatatacaaactat
aagaacgggaatcatcatgaaaatgacattaacattgatttttga
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