Staphylococcus pseudintermedius ED99: SPSE_0056
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Entry
SPSE_0056 CDS
T02008
Name
(GenBank) succinyl-diaminopimelate desuccinylase, putative
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sdt
Staphylococcus pseudintermedius ED99
Pathway
sdt00300
Lysine biosynthesis
sdt01100
Metabolic pathways
sdt01120
Microbial metabolism in diverse environments
sdt01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sdt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SPSE_0056
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdt01002
]
SPSE_0056
Enzymes [BR:
sdt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SPSE_0056
Peptidases and inhibitors [BR:
sdt01002
]
Metallo peptidases
Family M20
SPSE_0056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M42
SupH-like_C
Motif
Other DBs
NCBI-ProteinID:
ADX75405
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All DBs
Position
64863..66029
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AA seq
388 aa
AA seq
DB search
MSVLSSDEKIQILRDIIEIQSVNDYEVEVAQYLKNLFDKYQINAQILKLENSETRANLVA
EIGSGHPVLGVSGHMDVVNVGDITTWQYEPFQLTEDEDGRLHGRGTADMKAGLAALVISM
IEIKEAGLLKKGTIRLLATAGEEIASEGAAQLREQGYTDDLDALLIAEPSQNGMFYAHKG
SMHFELTSRGKSAHSSMPELGINAITPVVNFIYHLNEAFQHVHERNHIIGPPTMASTVIQ
GGDQVNSIPDKATALFNVRTVTEYNSQSFMALFQSIQERVSDDHHRLTLQAYGDRSPVVT
TGENRLVNLAQDISEKYFGEKVKKIASTGVTDASLLLKDKDIHFPFITFGPGETSQAHQV
DEYVQKDVYLTFIQLYQEMFTTYLNDEK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttttaagttcagatgaaaaaattcaaattttacgtgacatcatcgaaatccag
tcagttaacgattatgaggttgaagtggctcagtatttaaaaaatttgtttgataaatat
caaattaatgctcaaattttaaaactagaaaatagtgagacacgtgcgaacttagtagca
gaaattggctcagggcaccccgttcttggtgtttcaggtcatatggatgtagtgaatgta
ggagatataacaacatggcaatatgaaccatttcagctaacggaggatgaagatggccga
ttacatggtcgtggcacagcggatatgaaagcaggtctcgcagcactcgtaataagtatg
attgaaattaaagaagcgggattattgaagaaagggacgattcgtctattagcaacggct
ggtgaagaaattgccagtgaaggggcagcgcaattaagagaacaaggttatactgatgat
ttggatgctttattgattgcagaaccttcacaaaatggtatgttttacgcacataaaggg
tctatgcatttcgaattaacatccagaggtaaatctgcgcacagctctatgccagagtta
gggatcaatgccattacacctgttgtaaactttatttatcatttgaatgaggcgtttcaa
cacgtccatgaacgtaatcatatcataggaccgccaacaatggcctctacggttatccaa
ggtggggatcaggtgaactctattccagacaaagcaacagccttattcaatgtacggaca
gtgacagaatacaatagtcaaagttttatggcgttatttcaatcgattcaagaacgtgta
agcgatgatcaccatcgtctcacactccaagcatatggggaccgctcacctgttgtcact
acaggagaaaatcgtctggttaaccttgcgcaagatatcagcgaaaaatactttggcgaa
aaagttaaaaagattgcttcaacgggggttacggacgcatcgcttttattaaaagataaa
gatattcattttccatttataacctttggacctggtgaaacatcacaagcccatcaagtt
gatgaatatgtccaaaaagacgtttatttaacttttattcagttatatcaggaaatgttt
acaacttatttgaatgatgaaaaataa
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