Staphylococcus pseudintermedius ED99: SPSE_0837
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Entry
SPSE_0837 CDS
T02008
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdt
Staphylococcus pseudintermedius ED99
Pathway
sdt03420
Nucleotide excision repair
sdt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPSE_0837 (pcrA)
03430 Mismatch repair
SPSE_0837 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdt03400
]
SPSE_0837 (pcrA)
Enzymes [BR:
sdt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPSE_0837 (pcrA)
DNA repair and recombination proteins [BR:
sdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPSE_0837 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SPSE_0837 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ADX76152
LinkDB
All DBs
Position
894802..896997
Genome browser
AA seq
731 aa
AA seq
DB search
MNPLVANMNKEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITF
TNKAAKEMKERVQALVGEEAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKRENIDPKKYEPRIFIGEISKLKNDLLTPAKAEAEADDFYSRMVATVYKGYQQQL
VRNQALDFDDLIMTTIRLFERVPDVLDFYQNKFQYIHVDEYQDTNTAQYTLVNMLAQKFK
NLCVVGDSDQSIYGWRGANIHNILSFEKDYPNARTIFLEQNYRSTKTILQAANEVIRHNT
ERKPKGLWTANQQGEKIHYYEAMSERDETEYVVREIFKQQKKGKRYKDMAVLYRTNAQSR
VLEETFLKSNIPYVMVGGQKFYDRKEIKDLLSYLRLIANSADDISLQRIINVPKRGIGPS
SVEKIATYAVDHELTMFDALAEVDFIGLSKKVTQAAAEFYQLMSNLMQEQEFLEVSEIVD
EVLEKSGYREMLEREQSIESRSRLENIDEFMSVPVDYEKNTPLEEQSLINFLTDLSLVAD
VDGANLEDGVTLMTMHSAKGLEFPIVFIIGMEESIFPHIRAIQSESDHEMEEERRISYVA
ITRAEEELYLSHATSRTLFGRPQSNERSRFLNEIPEELLDLPERQYAMTIGSRKRQPAKR
GFSQRAVKNSASSSTASNWKVGDKVMHKSWGEGMVSNVNDKNGSIELDIIFKSEGPKRLL
AQFAPIEKKED
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaatccactcgttgcaaatatgaataaagaacagagtgaagcggtgcgcacgactgag
ggaccgcttttaattatggcaggtgcaggttctggtaaaacgagagtactcacgcatcga
attgcctatttattagatgaaaaagatgtatctccatacaatatcttagcgattactttt
acgaataaagcggcaaaggaaatgaaagaacgtgtgcaagcacttgtaggtgaagaggca
gaagtgatttggatgtcaacatttcactctatgtgtgtgcgcattttgcgacgtgacgct
gatcgtatcggtattgaacgcaactttacgataatcgatccgaccgaccaaaagtcagtc
attaaggatgttttaaaacgagaaaatatcgacccgaaaaagtatgaaccgagaattttt
attggagaaatcagtaaacttaaaaacgatttattgacacctgcaaaagctgaggcagaa
gcagatgacttttattcacgtatggtcgctacggtatacaaaggctatcaacaacagctt
gttcgtaaccaagcattagatttcgatgatttgattatgacgacaattcgattgtttgaa
cgtgtgcctgacgtgttagatttttatcaaaacaaattccaatatatccatgtagatgaa
tatcaagatacgaacacagcacaatatacattggtgaatatgttagcgcaaaagtttaaa
aacctatgtgttgtaggggattcagaccagtctatttacggttggcgtggcgcaaacatt
cacaatattttatcgtttgaaaaagattatccgaatgcacgtacaatctttttagagcaa
aactatcgttcgacaaagacgattttacaagcggctaacgaagttattcgtcataatact
gaacgtaaacctaaaggactatggactgccaatcagcaaggtgaaaaaattcattattat
gaagcgatgagtgagcgtgatgaaactgaatatgtcgtgagagaaatttttaaacaacaa
aaaaagggtaaacgttataaagatatggcggtactttatcgaacaaacgcacaatcacgt
gtacttgaggaaacatttttgaaatccaacattccttatgtcatggtcggcggtcaaaag
ttctatgatcgtaaagagattaaagacttactaagttatttgcgtttaattgcgaatagt
gccgatgatatcagtttacaacgtattattaatgtgccaaagcgtggtataggaccgtct
tcagttgaaaaaatagcaacctatgctgtagatcatgaattgacaatgtttgatgcattg
gcagaagtcgacttcatcgggttatcaaaaaaggtaacacaagcggcggcagaattttat
caattgatgtcgaacttaatgcaagaacaagaatttctagaggtttcagaaattgttgat
gaagtgctcgaaaaatcagggtatcgtgaaatgttagagcgtgaacaatcaatagaatca
cgtagccgtttagaaaatattgatgaatttatgtctgtacctgtcgattatgaaaagaac
acacctttagaggagcagtcgctgattaattttttaacggacttatcattagtggcggat
gtcgacggagcgaacttagaagatggtgtgacgttaatgacgatgcactcagcgaaaggg
ctagagtttccaattgtatttattatcggtatggaagaatccattttcccgcacattcgt
gcaattcaaagtgagagtgatcacgaaatggaagaagaacgacgcatcagttatgttgcc
attacgcgtgctgaagaagagctttacttatcacatgcgacctcacgtacgttatttgga
cgtccgcaaagcaatgagcgttcacgttttttaaatgaaattccagaagaactgcttgat
ttaccagaacgtcaatatgcaatgacgattggttcgagaaaacgtcaaccggcgaaacga
ggctttagtcaacgtgcggtgaaaaattcagcttcatcatcaacagcgtcaaattggaaa
gtcggcgataaagtgatgcataaatcatggggagaaggcatggtttcgaacgtcaatgat
aaaaatggctcaatcgagttagatattattttcaaatctgaaggacctaaacgtttactt
gctcaatttgcgcctattgaaaagaaggaggattaa
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