Staphylococcus pseudintermedius ED99: SPSE_1099
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Entry
SPSE_1099 CDS
T02008
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sdt
Staphylococcus pseudintermedius ED99
Pathway
sdt03030
DNA replication
sdt03430
Mismatch repair
sdt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPSE_1099 (dnaE)
03430 Mismatch repair
SPSE_1099 (dnaE)
03440 Homologous recombination
SPSE_1099 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdt03032
]
SPSE_1099 (dnaE)
03400 DNA repair and recombination proteins [BR:
sdt03400
]
SPSE_1099 (dnaE)
Enzymes [BR:
sdt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPSE_1099 (dnaE)
DNA replication proteins [BR:
sdt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPSE_1099 (dnaE)
DNA repair and recombination proteins [BR:
sdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPSE_1099 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADX76372
LinkDB
All DBs
Position
1126468..1129659
Genome browser
AA seq
1063 aa
AA seq
DB search
MVAHLNIHTAYDLLNSSITIEGAVQRTIELGYSAIAITDLNVMYGVPQFYDACIQHGIKP
LLGMTVYLTDQLNVLEAVVIAKNNEGLQNLFKLSSDIKVNRIKHVSIYEKKDLFNDTVVI
FKQMTNQEKHWHEEMPDGVTCFTDHQSAEDCELPKVLMQAAYYEKTEDKNALKVLHAIRD
NTKVNLVDSHETPTEHIYDVDALYDSQFAEAWLARTDEIANMCDAKLEYHQALLPEFVTP
DGSSANAYLWAELERALADFGLTEARYRKRLKYEYDVITQMGYADYFLIVSDLIRYAKSN
GVMVGPGRGSSAGSLVSYLLNITTIDPLQYDLLFERFLNPERVTMPDIDIDFEDTQREKV
IHYVQQKYGDYRVAGIVTFGHLLAKAVARDVGRVMGFDETTLSEASKLIPSKLGVTLDEA
YKEERFKAFVHRNHRHERWFEYCKKLEGLPRNTSTHAAGVIVNDQPLYQSIPLTEGETGL
LTQWTMTEAERIGLLKIDFLGLRNLTIIHQIIKQVTRDLKVDIDVEQIPFDDVHVFELLS
RGDTTGIFQLESEGVRRVLQKLQPEHFEDIVAVTSLYRPGPMEEIPTYIRRRHDPSQVTY
LHPDLAPILKRTYGVIIYQEQIMQIASQFAGFSYGEADILRRAMSKKNREVLENERQHFI
DGAKEKGYAETLSGQIFDLILKFADYGFPRAHAVSYSKIAYIMTYLKVHYPAYFYANILS
NVIGNDMKTNMMIQEAKQQHITIHGPHINKSQWRYVATQEGVYISLGAIKGVGYQTVQTI
MNERREQGPYKDFFDFCNRIPSRLRSRRTLEALILTGAMDCFGKNRATLLQSIDKVSDTD
VSIDTDLLASVATIKQEYAETEEMPSQQLSDFEKQYLGFYVTAHPVEKAFKQKQYLGIFQ
LQAHVTHQPILVTLDAVRVIRTKQGQQMAFVELNDGITTMDGVIFPKTYQQLTGTLETSK
FYIIWGKFEKRNDKLQLIINRLTTLEAFEIEKRQQTRKIVIREGMTDTLEQQYLTQKQSN
NNIAVYQYQESNNQFLFKGYLLQPNLYLDALLDSIKPEHIRLL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggttgcacatttaaatattcatacggcttatgatcttttgaattcgagtattacgatc
gaaggggccgttcagcgcacaattgaattaggatattcagccatcgcgattaccgacttg
aatgtcatgtatggtgtgccgcagttttatgacgcgtgtattcagcatggcattaaacct
ttattagggatgactgtttacctcactgatcaattgaatgtgctagaagcggtagtcatt
gctaaaaataatgaggggttgcaaaacttatttaaattgtcatctgatattaaagtaaat
cgaattaaacatgtatccatttatgaaaagaaagatttgtttaatgatacggtcgttatt
tttaagcagatgacgaaccaagaaaagcattggcatgaagaaatgcctgacggggtaaca
tgttttacagaccatcaatcggccgaggattgtgagttgcccaaagttttgatgcaggcg
gcgtattatgaaaagacagaagataaaaatgcgttaaaagtgttacatgcgattcgtgat
aatacgaaagtcaatttggtggattcacacgaaacaccaacagaacatatatatgatgtc
gatgcattgtatgattcgcaatttgcggaagcatggctcgcacgtacagatgaaattgcg
aatatgtgtgatgctaaactcgagtatcatcaagctttgttgcccgaatttgtaacgcca
gacggtagttcagcaaatgcttacttatgggctgagttagaacgtgcacttgcggatttt
ggactgacagaagcgcgctatcgtaaacgtttaaaatatgaatatgacgtcatcacacag
atggggtacgcggattactttttaatcgtgagtgatttaattcgttatgccaaatcaaat
ggtgtcatggtcggtccaggacggggctcttcagcgggttcattagtgagttatttatta
aatatcacgacaattgacccgcttcaatatgatttactgtttgaacgttttctaaatcct
gagcgtgtgacgatgccagatatcgatattgactttgaggatacgcaacgtgaaaaagtg
attcattatgtccaacaaaagtatggtgattaccgtgttgcaggtattgtgacgtttggc
catctacttgcgaaagccgtcgcacgagatgtggggcgcgtgatgggctttgatgaaacg
acgttaagtgaagcttctaaattaattcctagtaaactgggagtcacattggatgaggcc
tataaagaagaacgttttaaagcatttgtccatcgcaatcatcgtcatgaacggtggttt
gagtattgtaaaaagttagaagggttaccgcgaaatacgtcgacgcatgcggcaggtgtc
attgtgaacgaccaaccgctatatcaatctatcccgttaacagaaggcgagacaggtttg
ctgacacaatggacgatgacggaagcagaacgcattggtttattaaaaatcgacttttta
ggactgagaaacttaacgattattcatcaaatcatcaaacaagtgacgcgtgatttaaaa
gttgacatcgatgttgaacaaattccttttgatgatgtacacgtctttgaactattgtca
cgtggcgatacgacaggaattttccaacttgagtctgaaggtgtgcgacgtgttttacaa
aaattacagcccgaacattttgaagatatcgttgcggtgacgtctctttatcgaccgggc
ccaatggaagaaattccgacctacattcgtcgtcggcacgatccaagtcaagtcacgtat
ttgcatccagatttggcgccgattttgaaacgtacatatggagtgattatttaccaagag
cagatcatgcaaattgcgagtcagtttgcaggattttcttatggtgaagcggatatttta
cggcgtgccatgagtaaaaagaatagagaagtccttgaaaatgaacggcaacattttatt
gatggtgcaaaagaaaaaggctatgctgagacgttaagtggtcaaatttttgatttaatc
ttaaaatttgcggactacggttttccacgtgcgcacgcggtaagttattctaagattgca
tacatcatgacctatttaaaagtgcattatcctgcttatttttatgcgaacattttaagc
aacgtgattggtaatgacatgaaaacaaacatgatgattcaagaggcgaaacagcagcac
attacaattcacggtccgcatattaacaaaagtcaatggcgttatgttgcaacacaagag
ggcgtctatatttcattaggtgcgattaaaggtgtcggttatcaaacggtacaaacgata
atgaatgaaagacgtgaacaggggccttacaaagacttctttgatttctgtaatcgaatt
cccagtcgcttaagatcacgacgtacattagaagcattgattttgacaggtgcgatggat
tgttttggcaagaaccgtgcgaccttattacaatcaattgataaggtgtcagatacagat
gtcagtattgataccgatcttctggccagtgttgcaaccattaaacaagaatatgcggaa
actgaagaaatgccgagtcaacaattaagtgatttcgaaaagcagtatttaggcttttac
gtgactgcacatcctgttgaaaaggcgtttaagcaaaaacaatatcttggtatttttcaa
cttcaagcacatgtcacgcaccaacctattttagttacattagatgctgtacgagtcatt
cgaacgaaacaaggtcaacagatggcgtttgttgagttgaatgacggcataacgacaatg
gacggtgtcatcttcccaaaaacgtatcagcaattaaccggaactttggagacatcaaag
ttttatatcatttggggcaagttcgaaaagagaaatgataaacttcaattgattatcaac
cgattgacgactttagaagcttttgaaatagaaaaaagacagcaaacgcgcaaaattgtc
attagagaaggtatgactgatacactagagcaacagtatttaacccaaaaacaatcgaac
aacaatatcgctgtgtaccaatatcaagaaagcaacaatcaatttctatttaaaggttat
ttattgcaaccaaatctctatttagatgcacttttagactcgattaaacctgaacatatc
cgtttgttataa
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