Staphylococcus pseudintermedius ED99: SPSE_1110
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Entry
SPSE_1110 CDS
T02008
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sdt
Staphylococcus pseudintermedius ED99
Pathway
sdt03030
DNA replication
sdt03410
Base excision repair
sdt03420
Nucleotide excision repair
sdt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPSE_1110 (polA)
03410 Base excision repair
SPSE_1110 (polA)
03420 Nucleotide excision repair
SPSE_1110 (polA)
03440 Homologous recombination
SPSE_1110 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdt03032
]
SPSE_1110 (polA)
03400 DNA repair and recombination proteins [BR:
sdt03400
]
SPSE_1110 (polA)
Enzymes [BR:
sdt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPSE_1110 (polA)
DNA replication proteins [BR:
sdt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SPSE_1110 (polA)
DNA repair and recombination proteins [BR:
sdt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SPSE_1110 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPSE_1110 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH_5
MIER1_3_C
Motif
Other DBs
NCBI-ProteinID:
ADX76383
LinkDB
All DBs
Position
1143991..1146618
Genome browser
AA seq
875 aa
AA seq
DB search
MDKLILIDGNSLSFRAFYALPLLKNKAGIHTNAVYGFARLLEKIIKEEQPTHFLVAFDAG
KTTFRHETYQDYKGGRQKTPPELSEQFPYIRQLIDAYQIQRYELENYEADDIIGTLSREA
DQAGMQTIIITGDRDLTQLATDQVTIYYTKKGVTDVDHYTPQFIAEKYNGLKPSQIIDLK
GLMGDSSDNIPGVAGVGEKTAMKLLNQFGTVEGVYDHIEEVSGKKLKEKLENSRDDALMS
KTLATINCDSPITVSLEDTRLPQKMDESAKIELFKSLEFRQLLDGMDVEADNATASRDFV
PTTNMSKVDFTQLSEAAIHVEVAGPNYLKDELLKFGLYDGEQYVVIPFDKVNEYPELVAW
LEDETTQKWVHDAKKTYIAMKRSDIAIENVVFDTMLASYIIDPSRTIEDVQSVMTHFDQT
FVQDDVSVYGKGKSFHIPEDDILDKHIASILDAIHVVQPQMMTILEAHEQTSLLSEIELP
LALILSEMEYIGIHTDIDTLKEMETVIQTELDQLIEQIHEQAGEKFNINSPKQLGVILFE
KLELPVIKKTKTGYSTAVDVLEKLQNAHPIIDNILTYRTLSKLQSTYVEGLQKVIWDDGR
IHTRFNQTLAQTGRLSSVDPNLQNIPIRLEEGRKIRKAFKSTHEDYVILAADYSQIELRV
LAHITGDPTLQQAFNDNEDVHTTTAMKVFNVAAGEVTSLMRRQAKAVNFGIVYGISDYGL
SQSLGITRKEAQRFIDDYLNHFPGVKDYMDNIVQDAKQQGYVETLLKRRRYIPDITSRNF
NLRGFAERTAMNSPIQGSAADIIKLAMVQFHREVQKTSFKAQLLLQVHDELIFEVPKDEV
DEFGKFVEEIMAHALQLDVPLSVESDYGKTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtggacaaacttatattaattgatggtaatagtttaagttttagagctttttatgcattg
ccgttgttaaaaaataaagcagggattcatacaaatgctgtatatggttttgcgcgtttg
ttagaaaagattatcaaagaagaacaaccaacgcattttctcgtggcattcgacgctgga
aaaacgacctttagacatgagacgtatcaagattataaagggggccgtcaaaaaacgcca
cctgaattgagtgagcagttcccatatattcgccaattaatagatgcctatcaaattcaa
cgttatgaacttgaaaactatgaagcagatgacattattggaacactgagtcgtgaagca
gatcaagcgggcatgcaaacaatcatcattacaggggaccgagatttaacgcaacttgct
acagatcaagtgacgatctattatacgaaaaaaggtgtgacggacgtcgatcattacaca
ccacagtttattgctgaaaaatataatgggcttaaaccgtctcaaattattgatttaaaa
ggcttaatgggtgacagttctgacaatattccaggtgtggcaggtgtcggtgaaaaaaca
gcgatgaaattgttaaatcaatttggaacagttgaaggtgtttatgatcatattgaggaa
gtatcaggtaaaaagctaaaagaaaagcttgaaaatagtcgtgatgatgcgttaatgagt
aaaactttagcgacgattaattgtgatagtccgattacagtatcactcgaagacacacgt
ttacctcaaaaaatggatgaaagtgctaaaatcgaactgttcaagtcgttagaattccgt
cagttgctcgatgggatggatgtcgaggcagacaacgctacggcgagtcgagattttgtc
ccaacgacaaacatgtcaaaagtagatttcactcaattgtcagaagcggccattcacgta
gaagttgcgggaccaaactacctaaaagatgagttgttaaaatttggtttatacgatggc
gaacaatatgtagtgattccatttgacaaggtcaatgaatatccagagttagtggcttgg
ctagaagatgaaacgacgcaaaaatgggtacatgatgcgaagaaaacgtacattgcgatg
aaacgttcagacatcgccattgaaaatgtcgtttttgatacaatgttagcgagctatatt
atcgatccgtcgcgtacgattgaagatgtacagtctgtcatgacgcattttgatcaaacg
tttgtacaagatgatgtgtcggtttatggtaaaggcaaatctttccacatacctgaagat
gacatactcgataaacatatcgcttccattttagacgcgattcatgtcgtgcaaccgcaa
atgatgacgattcttgaagcgcatgaacagacatcattactctcagaaatcgagttacca
ctcgcgctcattttaagtgaaatggaatatatcggtattcatactgacatcgacacatta
aaagagatggaaacagtcattcaaacagagttggatcagttaatagaacaaattcatgaa
caagctggtgaaaaatttaatattaattcacctaaacaattaggcgtcattttatttgaa
aaacttgagttgcccgtcattaaaaaaacgaaaacgggttattcaacagcggtcgatgtg
ctcgaaaaattgcaaaatgctcatccaattatcgacaacattttaacgtatcgtacgtta
tcgaaattgcagtcgacttatgttgaaggtttacaaaaggtgatttgggatgacggtcgc
attcatactcgttttaatcaaacacttgcacaaacgggacgtctgtcttctgttgatccg
aacttgcaaaatattccaattcgtttagaagaggggcgtaaaattcgtaaagcgtttaag
tctacgcacgaagattatgtcattcttgcggcggattactcacaaatcgaattacgtgtt
ttagcacatataacaggagacccaacgttgcaacaagcgtttaatgataatgaagatgtt
cataccacaacagcgatgaaagtgtttaatgttgcagctggtgaagtcacatcattaatg
cgtcgtcaagcaaaagcagtaaactttggtatcgtctatggcattagtgattatggactc
agtcaaagtttaggtatcacacgtaaagaagcacagcgattcattgacgattacttgaac
cattttccaggtgtgaaagattatatggacaacattgtgcaagatgccaaacaacaaggt
tatgtggagacattattaaaacgtcgtcgttacattcctgacattacgagtcgtaacttt
aacttacgtggatttgctgaacgaactgcgatgaactcaccaattcaaggaagtgcggca
gatattatcaaattagcgatggtgcaattccaccgtgaagtacaaaagacatcatttaaa
gctcagttattattacaagtacatgatgaactgatttttgaagtgccgaaagatgaagta
gatgaattcggcaaatttgttgaggaaattatggcgcatgcattacaattagatgtccca
ttaagtgtagaatcagattatgggaaaacgtggtatgatgcaaaatag
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