Staphylococcus pseudintermedius ED99: SPSE_1491
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Entry
SPSE_1491 CDS
T02008
Symbol
cvfA
Name
(GenBank) phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sdt
Staphylococcus pseudintermedius ED99
Pathway
sdt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPSE_1491 (cvfA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdt03019
]
SPSE_1491 (cvfA)
Messenger RNA biogenesis [BR:
sdt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPSE_1491 (cvfA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
Glt_symporter
Motif
Other DBs
NCBI-ProteinID:
ADX76750
LinkDB
All DBs
Position
complement(1520259..1521818)
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AA seq
519 aa
AA seq
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MNLLSLLLILLGIILGVVVGYFIAQNLIYQKQLQAKQTAKDILEQANKEAENLKKEKLIE
AKEENQILRERVENELRERRTELQRQESRLLQKEENLERKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQSIIMKHEQELERISGLTQEEARKEQLSRVEDELSQDIAVLVKEKENE
AKEKVNQNAKELLATVVQRFAADHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIAKTALINLVSDGRIHPGRIEDMVEKSRREVDEIIRD
AGEHATFELNVHNMHPDLIKILGRMHYRTSYGQNVLKHSIEVAHLSGMLAAELNEDVTLA
KRAGLLHDIGKAIDHEVEGSHVEIGVELAKKYGEPETVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIKRLERLEEISENYEGVEKAFAIQAGREIRVIVEPDTIDD
LKSHRLARDIKNQIEGELQYPGHIKVTVVRETRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaagcctcttactcattttgctgggtatcattctaggagttgttgtaggg
tattttatcgcccaaaacttgatttaccaaaagcagttgcaagcgaagcaaactgcgaaa
gatattcttgaacaagcaaacaaagaagcagaaaaccttaaaaaagagaagttaatcgaa
gcgaaagaagaaaaccaaattctccgagaacgtgttgaaaacgaacttagagaacgacgt
actgagcttcaaaggcaagaatcccgacttcttcaaaaagaggaaaacttggagcgaaaa
tctgatctacttgataagaaggatgagattttagagcaaaaagaatctaaacttgaagaa
agacaacaacaagtagatgcaaaagagagtagtgttcaatcgataataatgaagcacgaa
caagaactagaacgcatctccggtctcacacaagaagaagcacgtaaagaacaattatcg
cgtgtagaagatgagttgtcacaagatattgcagtacttgttaaagaaaaagaaaatgaa
gcaaaagaaaaagtaaaccaaaatgctaaagagttgctcgctacagtagtgcaacgtttt
gctgcagatcatacttctgaatcaacagtttcagtagtaaacttgcctaatgatgaaatg
aaagggcgaattattggtcgtgaaggtcgaaacattcgtacattagaaacgcttacaggt
attgatttgattattgatgatacgccagaagcagttattttatcaggttttgacccgata
cgtcgagaaattgcgaaaacagcattaattaatctagtatcagatgggcgtattcatcct
ggacgcatagaagatatggttgaaaaatcaagacgtgaagtagacgaaattattcgtgac
gctggtgaacatgcaacattcgaattaaatgttcataatatgcatccagatttaattaaa
atattaggtcgtatgcattaccgtacaagttacggtcaaaatgttttgaaacattctatt
gaagttgcacatttgtcaggtatgctcgctgcagaactgaatgaagatgtgacattagcg
aaacgtgcaggtttattacatgatattggtaaggccattgaccatgaagtggaaggcagt
cacgtagaaattggtgtggagttagctaaaaaatatggcgagcctgaaacagtgattaat
gcgatacactctcatcatggtgatgtggagccaacttctatcatttcaattttagttgct
gcagctgatgcattatctgctgcaagaccaggggcaagaaaagaaacattagagaattac
atcaagcgtttagagcgtttagaagaaatctctgagaattatgaaggtgttgaaaaggcc
tttgcgattcaagcaggtcgagaaattcgtgttattgtagaacctgatacgattgatgat
ttaaaatctcaccgtttagcgcgagatattaaaaatcaaattgaaggtgaattgcaatat
ccgggtcatatcaaagtgacagtcgttcgtgagacgagagcaattgaatatgcgaaataa
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