Staphylococcus pseudintermedius ED99: SPSE_1508
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Entry
SPSE_1508 CDS
T02008
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sdt
Staphylococcus pseudintermedius ED99
Brite
KEGG Orthology (KO) [BR:
sdt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdt03016
]
SPSE_1508 (truB)
Enzymes [BR:
sdt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SPSE_1508 (truB)
Transfer RNA biogenesis [BR:
sdt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SPSE_1508 (truB)
Prokaryotic type
SPSE_1508 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Nucleocapsid-N
Imm58
Motif
Other DBs
NCBI-ProteinID:
ADX76767
LinkDB
All DBs
Position
complement(1538872..1539789)
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AA seq
305 aa
AA seq
DB search
MYHGILPVYKERGLTSHDVVFKLRKILKTKKVGHTGTLDPEVDGVLPICIGQATKVSDYV
MEMGKTYRAEVTLGFSTTTEDQTGDVLAREIVTVDQFDANQVDAVLHSFKGWTTQIPPMY
SSVKVNGKKLYEYARNGETVERPKRQIHISHIARISDLIFENDIVRFSIEVTCGKGTYIR
TLATDIGRALHVPAHMSLLTRTMSGGFSLDQALTLALIEQSHHDDTLQNQLLPLAYGLKG
LPSFHVQNESDKMKIKNGQKFAKGYFNVPFEQQLVMVDSDNDDVLAIYEVHPSRQDEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatggtattttaccggtctataaagaacgagggttgacaagtcacgatgtcgtt
tttaaattgcgcaaaattttaaagacgaaaaaagtcggccataccgggacattagatcct
gaagtagatggcgtccttcctatttgtatcggtcaagcgacaaaagtgagcgattatgtg
atggaaatgggaaaaacgtatcgcgctgaagtgacattaggtttttcaacgacgacagag
gatcaaacgggtgacgtcttggcacgtgaaatcgttacggttgaccaattcgatgccaat
caagttgatgcagtgttacactcatttaaagggtggacgacacaaattccaccaatgtat
tcgtctgtgaaagtaaatggcaaaaaattgtatgaatacgcacgcaatggtgaaacggta
gagcgccctaaacgtcaaattcatatttcgcatattgcacggatttcggacttaattttt
gaaaatgacatcgtacgtttttcaatagaagtgacttgtggcaaagggacatatattcga
acactcgcaacggatattggtcgagcactccatgtaccagcgcatatgtcattgttgaca
cggacgatgagtggtggcttcagtttagaccaagcactcactttagcattgattgaacag
tcgcatcatgacgacacactccaaaatcaattattaccacttgcatacggcttgaaagga
cttccatctttccatgttcaaaatgaaagtgataaaatgaagataaagaatggacaaaag
tttgctaaaggttattttaatgtgccatttgagcagcaacttgtcatggttgatagtgac
aatgatgatgtattagcaatttatgaagtgcatccatcacgacaagatgaaattaaaccg
aaaaaggtatttaattaa
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