Staphylococcus pseudintermedius ED99: SPSE_2022
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Entry
SPSE_2022 CDS
T02008
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sdt
Staphylococcus pseudintermedius ED99
Pathway
sdt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPSE_2022 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdt03019
]
SPSE_2022 (recQ2)
03400 DNA repair and recombination proteins [BR:
sdt03400
]
SPSE_2022 (recQ2)
Enzymes [BR:
sdt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPSE_2022 (recQ2)
Messenger RNA biogenesis [BR:
sdt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SPSE_2022 (recQ2)
DNA repair and recombination proteins [BR:
sdt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SPSE_2022 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ADX77263
LinkDB
All DBs
Position
complement(2087234..2089015)
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AA seq
593 aa
AA seq
DB search
MEQTLSHYFGYKSFRPGQKEIIERVLNHHHTLGVLPTGGGKSLCYQVPGLMFKGTTIVIS
PLISLMKDQVDQLTAMGISAAYLNSSLSTQAQKEIETQLVNGELKFLYIAPERFEQTYFE
MLLRRVDISLVAFDEAHCISKWGHDFRPSYQAVIQRVLTMPQQFSIVALTATATTEVQQD
IMERLMISRQHLVKTSIRRRNLKFQVNGTYQRQKFVLDYIQKHSQKAGIVYCSTRKQVEA
LYEALEDADIPVSYYHAGMTAKQRDEAQNDFLYDRTRVVVATNAFGMGIDKSNVRYVIHY
NMPGDLESYYQEAGRAGRDGLDSDCILLYSDRDIALHQYFIGASKADDDYKERMGEKLTK
MIQYTKTTKCLEATLVHYFEPNEKLEECHQCSNCIDKNKTYNMTKEAKMIISGVARLRQQ
EGYQTVIQVLRGEVSDYIRHQGYENLSTYGLMKDYTTGELHHLIDELRFKGFLNEHDEIL
MCDASVEKLLSEDTQVFTRPFKRKSKETVHINTVEGVDRTLFEKLVEVRREMSERLNMPP
TNIFTDYTLEAFAKRKPVTKQEMIQIDGVGSYKLKHYCPEFLEAIQEYKMHSS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacattgtcgcattattttggatacaaatcttttcgtcctggtcaaaaagaa
attattgaacgcgtattgaatcatcatcatacgttaggggtgttacccacaggtgggggt
aaatcgttatgttatcaagtaccgggattgatgtttaaaggaacgaccattgtcattagt
cctttaatttcgttaatgaaagaccaagtggaccaattgaccgcaatgggaatatctgcg
gcttatttgaatagtagtttaagtacgcaagcacaaaaagagatagaaacgcaattggtc
aatggtgagttgaaatttttatacatcgcaccggaacgttttgagcaaacttattttgaa
atgttgttgcgacgtgtcgatatttcactcgtcgcatttgacgaagcacactgtatttca
aaatggggacatgattttcggccgagttatcaagcagtcatacaacgcgtattgaccatg
ccgcaacagttttcgattgtcgcattgactgcaacagcgacgactgaagtgcaacaagat
attatggaacggttaatgatttcgcgacaacacttagtcaaaactagtattcgtcgacgt
aatttgaagttccaggtgaatgggacgtatcaacgtcaaaagtttgtattggattatatt
caaaaacatagtcagaaagcggggattgtttattgttcaacgcgtaaacaagtagaagcc
ttgtatgaagctttagaagacgcagatatccctgtatcctactatcatgcaggaatgaca
gcgaaacaaagagatgaagcccagaatgactttttatatgaccgtactcgtgtagtcgtt
gcgaccaacgcattcggtatgggaattgataaatcgaatgtccgttatgtcattcattac
aatatgccgggtgatttggaatcgtattatcaagaagcaggacgtgcaggtcgagacgga
ttagatagtgattgtattttattgtacagtgatcgagatattgctttacatcagtatttt
atcggtgcctcgaaagcggacgatgattacaaggaacgtatgggcgaaaaattgacaaaa
atgattcaatatacgaaaacgacgaaatgtctagaagcaacattagtccattattttgag
ccgaatgaaaaacttgaagaatgtcaccaatgtagtaattgtattgataaaaataaaacg
tacaatatgacgaaagaagcgaaaatgatcattagcggtgtcgcacgtttacgtcaacaa
gaaggatatcaaacggtcattcaagttttgcgtggcgaggtttcggactacattcgtcat
caaggctatgaaaatctttcgacgtatggtttgatgaaagactatacgactggcgagtta
catcatttaatcgatgaactccgctttaaaggctttctcaacgaacatgacgaaatactc
atgtgtgatgcctcagtagaaaagttattgagtgaggatacacaagtgtttacaaggccg
ttcaagcgtaagtcgaaagaaacagtgcatattaacactgtagaaggggtcgaccgcacg
ttatttgaaaagcttgtcgaagtcagacgtgaaatgagcgaacgattaaacatgccaccg
acgaatatttttacagactatacgttagaagcttttgcgaaaagaaagcctgtcacaaag
caagaaatgattcagattgatggtgttggtagttataagctgaagcactattgtcctgaa
tttttagaagcgattcaagaatataaaatgcatagttcgtaa
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