Seriola dumerili (greater amberjack): 111216310
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Entry
111216310 CDS
T05606
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111216310
Membrane trafficking [BR:
sdu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111216310
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
111216310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Synaptobrevin
Beta-prop_VPS8
CFAP43_N
VPS8_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
111216310
NCBI-ProteinID:
XP_022593524
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MKKFNIRKVLDGLKEASSSTPSVQVGPQENHLIQENLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDSVHL
WNLRQKRPAILHSLKFNRERITFCHLPFQSKWLYIGTERGNIHIVNVESFMLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKKADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNVRGQGKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
NGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKGSTDVSDEDPFAIQIMAWCPESRMLCVAGVSANVIIYRFSKLEVTTEVVQLLE
VRMQYELNDIESPDGGGGGGEQTSALPTPGASPQTSGPPSHPPTSSNNSDGGNVPCLKVR
STPLKQSPGYQVDLVVQLVWVSGEPPQQITSLALNSSYGLVVFGNSNGLAVVDYIQKTVV
LNLGTVELYGSNDPYQRQPRSPRKTRQPSGGLCDINEGSATSEDRCKSPTSVLMSNSNLQ
QFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDK
EAREAISSFHFCETFARKGDSTLTHCLYVGTSLGTVLVLALTLPPAGEQRQLQPVIISPT
GMLVRLKGSILRMAVLDSTGSQMPPAYEPWFEPNVTADGEEREKVRKRRPVSVSPSTSQD
LNESQYAVVCSEKQAKVISLPSQTCIYKHSITETSFILRVDVVQMSQGMCVACFCANGHI
MTLSLPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEVQRITYSQDTCENLQE
MLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGELSAGKASRSLAQHIPGPGGIE
GMKGAASGVVGDLARARIALDERGQKLGELDERTAAMMASADSFSKHAHEMMLKCKDKKW
YQF
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgctggacggcttgaaagaggcgtcctcctccacc
ccgtctgtccaagtggggccacaggaaaaccatctgatccaggagaacctccagtccgag
catttccagctctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatggcc
ttcgaccccgtgcagaagatactggccatcggcacccagagtggagctctcagattgttt
ggacgtccgggtgtggagtgttactgtcagcacgagagtggagctgccgtcatccagcta
cagtttctcatcaacgagggagcgctggtgagtgctctggctgatgacagtgtccacctg
tggaacctgaggcagaagagaccagccatccttcactccctcaagttcaacagagagaga
ataactttctgccacctgcccttccagagtaaatggttgtacatcggcacagaacgaggg
aacatccacatcgtcaacgtggagtcctttatgctctcaggctacgtcatcatgtggaac
aaagccattgaactgtcctccaaggctcaccctggaccagttgtccatataagcgacaac
ccaatggacgaaggaaagcttataattggatttgagtctgggatcgtggtcctgtgggat
ctgaaatcaaagaaggccgactatcgctacacttacgatgaggcgatccactcagttgcc
tggcatcacgagggcaagcagttcatttgcagtcactcagatggaactctgaccatatgg
aacgtcagaggccagggcaagccgatacagacaatcaccccacacggaaaacagcccaag
gacgggaagaagccagagccttgtaaacccattctcaaagtggagtacaaaaccactaga
aatggggagcccttcataatcctgtctggtggtctgtcctacgacacggtgggccggcgg
ccttgtctgacggtaatgcatgggaagagtaccgctgtgctggagatggactatcctata
gtagatttcctcacactctgtgagacaccataccctaatgattttcaggaaccttatgct
gtggtggtccttctggaaaaggatttagtggtgatcgaccttgcacaaaatggttacccc
atattcgagaacccctatcctctgactatccacgagtctcctgtgacctgctgcgagtac
tttgccgactgccctgtggacctcatacctgcactttactctgttggctcgcggcagaaa
cgacagggctacagtaaaaaggaatggcctattagtggtggaaactggggtcaaggcaca
caaagctacccagagatcatcatcactgggcatgctgatggaaccgtgaagttctgggat
gcttctgcaataatgctccaggtgctctataagctcaaaacagccaaggtgtttgacaga
aaccggtccaaggaagacaagggcagcacggatgtgtcagatgaagacccctttgctatt
cagattatggcctggtgccctgaaagccggatgctgtgtgtggccggggtgtcagccaat
gttatcatctaccgcttcagcaagctggaagtaactactgaggtggtgcagctactagaa
gtgcgaatgcagtacgagctgaatgacatagagtctccagacggcgggggtggaggcggg
gagcagacatcggcgcttccaacacccggtgcctcccctcagacaagcggcccaccttca
cacccccccaccagcagcaacaactctgacggaggcaacgtgccctgcctcaaagtgcgc
agtactcctctgaagcagtctccaggttaccaggtagacttggtggtccagttagtgtgg
gtgagtggagagcctcctcagcagatcacaagtctggcgctcaattcctcctacggccta
gtggtgtttggcaacagtaacggtctggcggtggtggactacatccagaagacagtagtg
ctgaacttggggacggtcgagctttacggctccaatgacccctaccagagacagccccgg
tcgccaagaaagacgcgacagccttctggaggtctatgcgacatcaacgagggctcagcc
acatcagaggaccgctgcaagtcccctacttcagtgttgatgtcaaacagcaatctacag
caattctacaatggaggtggtagaggagcaaagatgtcacggaaattaagcttgcctact
gagctaaagccagacttggtcctcctgtctgtatgcccgccgcggggtgccaacccatta
gaccaccgggacaattctttcagccgctctcgctcctccagtgtcaccagcatcgacaag
gaagcccgagaagccatcagctccttccacttctgcgagaccttcgcccggaagggagac
agcactttgacacactgcctgtatgtgggcacctccctgggaaccgtgctggttctagct
ctcacattgccacctgctggggagcaacgacaactgcagccggttatcatttcacctaca
ggcatgttggtacggctgaagggcagcatcttgcgcatggctgtcctggactccacaggg
tcccagatgccccccgcgtacgagccttggtttgagcctaacgttacagcagatggtgaa
gaaagagagaaggtccgcaagcgccggcccgtctctgtgtccccttccacctcccaggac
ctcaacgagagccagtacgctgtggtgtgctcagagaaacaggccaaagtcatttccctc
ccctcccagacctgcatctataaacacagcatcacagagacctccttcatcttgcgggta
gatgtggtgcagatgagccaaggcatgtgtgtggcttgtttctgtgccaacggccacatc
atgaccctcagtttgccaggactgagaccgctcatggatgtaaactacctgcctttgaca
gacatgcggatagccaggacattttgtttcaccaacctaggtcaggccatgtacctctgc
tcccccactgaggtccagaggatcacttacagccaggacacctgtgaaaacctacaagag
atgctgggtgaactttttacaccagtggagacaccagaggcacccaacagagggttcttc
aaaggtctctttggaggaggagcacagtcactggacagagaggagctatttggtgagtta
tcagccggaaaggcatctcgaagtctggcccagcacatcccaggcccgggtggcattgag
ggcatgaagggggcagcctctggtgtggttggagatttggcacgtgcccgaatagcactg
gatgaaagaggccagaaactgggcgagctggatgagaggacagctgccatgatggccagc
gcagattccttttccaaacacgcccatgagatgatgctgaagtgcaaagacaaaaaatgg
taccagttctga
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integrated database retrieval system
