Seriola dumerili (greater amberjack): 111216405
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Entry
111216405 CDS
T05606
Name
(RefSeq) glial fibrillary acidic protein-like
KO
K07610
desmin
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04519
Cadherin signaling
sdu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
111216405
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111216405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdu04812
]
111216405
Cytoskeleton proteins [BR:
sdu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
111216405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
Phage_scaffold
DUF7491
Gp44_C
CCDC39
Motif
Other DBs
NCBI-GeneID:
111216405
NCBI-ProteinID:
XP_022593646
UniProt:
A0A3B4UB50
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MSRSPERMSSYRRHFEGSLAAPPAYQLRVSSPSPTRRETRSASFTRSGGTMGRRSLSSKA
RLTSSVSMGALCFGMSMGLGPKLDLDAAAAENQAFMTTRTNERQEMVALNDRLAAYIEKV
RTLESKNMVLEAEIEALKGRHVRPSGLRQLYESQLRELNRDTEKMRVQRDMSLVAKEAML
GQLDALRAKYDEAVEARKKTEHDIEALRPDVDKATSVRIALEKQLENLESELAFLQRVHK
EEIEELMQQIYSAATKVDLTFGLPDLSSALRQIQSQYDNIAAKNLQEMDSWYRTKFQDLS
NISCKHVQSVRSVREEIAGYKKDILNKERELEALKSRNEYLEAQIRNAAVKYKKEEEDLQ
ERIEAIKLDLRVTKEKIALLLREYQELLNVKMALEIEITTYRKLIEGENNRLSTMVHNLS
LHLTSAVSMCAASASASASASASASAPAMSSKLDDAPTDSSSSGAEKAPGAGTARVEVAS
SDTQTDGSLEEQATEMSERKTVLIRTVKTHEDTYESNTQECTITISGAADDTDEE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagtccagagaggatgtcatcatatagacgtcatttcgagggctccctggcc
gcccctcccgcctaccagctccgggtgtccagtccctctcccacccgcagggagacccgc
tcggccagcttcactcgaagtggtggaacgatggggcgtaggtccctctccagtaaggct
cgcctgaccagcagtgtgagtatgggagcgctgtgctttggtatgtccatggggctcggg
ccaaaactggacctggatgcagctgcagcagagaaccaggcctttatgacgactcgaact
aatgagaggcaggagatggtagcccttaatgaccgtctggcagcttatattgaaaaggtg
cgaacactggaatcgaagaacatggtgttggaggctgagattgaggccctgaagggtcgc
catgtcagaccatcaggcctcaggcagctgtacgaatctcagttgagggaactcaacagg
gacactgagaagatgagagtccagagggatatgtctttggtagccaaggaggcaatgttg
ggccagttggacgcactgagggccaaatatgatgaagctgtggaggccaggaaaaagacg
gagcacgacattgaagcactacgtcctgatgtggataaagcaacctcagtccggattgct
ctggagaagcagctggaaaacctggagagtgagctggctttcctgcagagagttcacaag
gaggaaattgaggagctcatgcagcagatctactcagcagccaccaaggtggacctgacg
tttggcctcccagacctctcctctgctctaagacagattcagtctcagtatgacaacatc
gccgccaaaaacctacaggaaatggacagctggtaccggacaaagtttcaggacctgagt
aacatctcctgcaaacatgttcagagtgttcgaagtgtgagagaggaaatcgcaggctat
aaaaaggatatcctcaacaaggaacgtgaattggaggcattgaagagcaggaatgagtat
ttggaggctcagatccgtaatgcagccgtgaaatacaaaaaggaggaggaggacctacag
gagcgtatagaagccattaaactggatctaagggtgaccaaggagaagatagcgctgctg
ctgagggaatatcaggaactactgaatgtcaagatggctctggagattgagatcaccacc
tacaggaagctgattgaaggagaaaacaaccgtctgagcaccatggtccataacctgtct
ctgcatctcacttccgctgttagcatgtgtgctgcctcagcctcagcctcagcctcagcc
tcagcctcagcctcagcccctgcaatgtcttcaaagctggatgacgcccccactgacagc
agcagtagtggggcagagaaggctccaggtgctggcacagcccgagtggaagtcgcctca
tcagacactcagacagacggcagcttagaggaacaggctacagagatgtctgagaggaag
acggtcctgatcagaacagttaagacacatgaagacacttatgagagcaacacacaggag
tgcaccatcaccatatctggagcagctgatgacacagatgaagaataa
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