Seriola dumerili (greater amberjack): 111216442
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Entry
111216442 CDS
T05606
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 4
KO
K24682
patched domain-containing protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111216442 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
Other domain-containing proteins
Patched domain-containing proteins
111216442 (ptchd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
DUF7041
Motif
Other DBs
NCBI-GeneID:
111216442
NCBI-ProteinID:
XP_022593692
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MCFIGGNGASASWILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEVLVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLAKS
AGNILELADQVLQVHKQVLDLRDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLR
NHGPVVQDAIAERWENEFCALVSRLSTSEAPHATDQLHIQSLTSFSLWRDFHQTGVLAKG
EVLVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLL
GIPFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGA
SPFTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYL
DRQPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYA
SFSFMGCLQISDGSNIVNLLASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQ
EHLKTLSHGFNKISWMDNFFHYLRVVNVSASTKSDFISILKGSFLRSPEYQHFTEDIIFS
KNRETDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRY
SSSVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSI
SILCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPL
VFVPSNLTYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERE
REREREREREEIECIEVRENPDHVTNV
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggaaacggggcatctgcaagctggattttgtggaggatgctgcgg
caagtgatacacagagggctcaaggcttcgttctactggctgggcttattcgttagcagg
caccccgttttcttcctcactgtccccgcggtcctcaccatcattttcggatctaccgtt
ctcagccgattcaagccggagacggacctggaggtgctggtcgccccgactcacagcctc
gccaagatcgagcggagtctcgccaacagcctgtttcccatcgaccagtcgaagcacaag
ctgtactcggatttgcacaccccgggcagatatggcaggctgatcctgctcgccaagtcc
gcgggaaacatcctggagctagccgaccaggtcctgcaggtccacaagcaggtgctggat
ttacgcgatggccgcgtgtctttcatcggccaccagctgggcggcgtgtccttctcgccc
aacagccgagaccagcaggtcaagttcgcccgcgccgtacagatcacctactacctccgc
aaccacggccccgtggtgcaggatgccatcgccgagcgctgggagaacgagttctgcgcc
ctggtcagccggctgtccacgtccgaggcgccgcacgcgaccgaccagctccacatccag
tcgctcacctccttcagcctgtggcgggacttccaccagacgggcgtgctggccaagggg
gaggtgctggtcagcctggtgctggtgctcctggccgccaccatctccagctccatgcga
gactgcctgagggggaagccgttcctgggcctcctgggagtcctgaccatctgcatcgcc
aacgtgaccgccgcggggatcttctttatatcagacgggaagttcaactccacgctgctg
gggatcccattctttgccatgggccatggaaccaaaggcgtgttcgagctgctagctggc
tggaggagaacgagggaaaacctccccttcaaggagcgcgtggcggacgcttttgccgac
gtgatggtgtgctacaccatgaccagctcgctctacatcatcaccttcggcatgggtgcc
agccctttcaccaacatcgagtcggtgaaaattttctgccagagcatgtgcgtcgccata
ctggtcaactacttctacgttttctctttctacggctcctgcctggtgtttgccggacag
ctggagcagaaccgctaccacagcgttttctgttgtaaaatcccctcggtggagtatctg
gaccggcagcccacttggtttaaaaccatgatgagtgacggccatgacctgtccacgcac
cacgacagtgtcccctaccagaatcacttcatccagcacttcctgcgagagcactacaca
gagtggattaccaacacttatgtcaaaccctttgtcgtcattctctatctcatctacgcc
tccttctcattcatgggatgtttacaaatcagtgatgggtcgaatatcgtcaacctgctg
gccagtaactctccgagtgtttcgtatgctctgacccagcagaaatacttcagtaactac
agtcctgtgatcgggttttacatttacgagcccatcgagtactggaactccacggtgcag
gagcacctgaagaccctgagtcatggctttaacaagatctcctggatggacaactttttc
cactacctgcgggtggtcaacgtcagtgcgtcaacaaagagcgacttcatctccatcctg
aaaggctccttcctgcgcagcccggagtaccagcacttcaccgaggacatcatattctcc
aagaaccgtgagactgacgagtacgatatcatcgcctcgcggatgtacttggtggcgcgg
acgaccgagaagaagcgcgaggaggtggtggagcttctagagaagcttcgaccgttgatg
ctaatcaacagcatcaagttcattgccttcaatcccacattcgtgttcatggaccgctac
agctcctccgtcatctcgcccatcctgacctcaggcttcagtgtgctcactatcctcatc
ctcactttcttcctggtcatcaaccccttggggaacttctggctcatcctcacggtcaca
tccgtggagctgggtgtcttgggtttgatgaccctctggaacgttggcatggacagcatc
tcaatcctgtgccttatttataccctcaacttcgccatggatcactgtgcaccacacctg
tacacttttgtgctggccaccgagcacactaggacgcagtgcatcaagttggcactggag
gagcacggggccgccatcctgcagaacacatcctgctttgtgatcgggatcatgcccctg
gtgtttgtgccttccaatctgacctacacactgttcaagtgctccctcctcactgcgggc
tgcactgtgctgcactgcttcgtcatcctgccggtcttcctgaccttcttcccgccctcc
aaaaagagacacaagaaaaagaaacgggccaagcggaaagagcgggagagggagagggaa
cgggagagggagagggaaagagaaagggaggagatagagtgcattgaagtcagggagaat
cctgatcatgtgacaaacgtctga
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