Seriola dumerili (greater amberjack): 111216478
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Entry
111216478 CDS
T05606
Name
(RefSeq) PR domain zinc finger protein 1-like isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111216478
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
111216478
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-met
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
111216478
NCBI-ProteinID:
XP_022593743
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MCGSSQGFTASSSQCTTAMLTSERSPQSAGVVIAATMPETQDVDMTSWSEADFEEKCTYI
VKDQPLEQESENPGRTRAERSLPRNLALKRCHSSAEVLGVTSKEMIPKGTRFGPLVGESY
TKEILLTGADRKYFWRVFSEGHLRHILDGLNEQRSNWMRYVNPACSVEEQNLVACQSGLD
IYFYTIKPLQPGQELLVWYCPEFAQRCNYPPLGQLAIDSVEQSQAQEKTTAKRGHSVSEI
LQDEPSRSPTACPRRLFSPLSQANLSAVFPSCPRVVYPIQPDSDSIHGHRYAPLPSLPSC
GPPAAKRPALSRPVPSVLHFSFEHSQGPVTAKPYQEPSVPDRVHPALRRSPYYLPHYSPG
LNSILPHSYPFYSDRLKPHVTLSSHLLPFDSYAHLLHPLVNGHKDLTLALSSTKQDLILS
PISEHQDNKDLISNRTNYLRIPSDDLRDFKYSPPSNVHADLTIPATSSASSMVTSPRGAL
PSLAPGGCSPPVGMAACSDFLPSKPTSATQGNTEDAIDLRKTKQGGQIIGYKTLSYPLTR
QNGKIRYECNVCGKVFGQLSNLKVHLRVHSGERPFRCQTCNKNFTQLAHLQKHYLVHTGE
KPHECKVCHKRFSSTSNLKTHQRLHSGERPYQCKLCPARFTQYVHLKLHKRLHSGERPYR
CPRCPCAYLHYCSLQVHLQGFCPLSPSASHRHSPEELHRVNSELERFDVSEAAERLEAMA
AEAEMDKGNVTDLIQKMGTHTSGHQDGTGGETELSVCKSAKECSGVQLRHGSPLPLHATS
IKLESSCISEP
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggcttcacagcctcctcctctcagtgcaccacagccatgtta
acctcagagaggtcaccgcaaagcgcaggggtcgtcatcgccgcaacgatgccagagaca
caggacgtagatatgacgtcatggagcgaggcagactttgaggagaagtgcacttatatt
gtgaaggaccaacctctggaacaggagtccgaaaaccccgggaggacacgagctgagaga
tccttacccagaaacctggccctgaaacgctgccacagctcagcagaggtgctcggggtg
accagtaaggagatgattcctaaggggacacgttttggccctctggtgggagagagctac
accaaggaaatactgctgacaggcgccgacaggaagtacttctggagggtcttctcggag
gggcacttgcgccacatccttgatggtttgaacgagcagcgcagcaactggatgcgctac
gtcaacccagcctgctcagtggaggagcagaacctggtcgcgtgccagagcggtttggac
atctacttctacaccatcaaaccacttcagccgggccaggagctactggtgtggtactgc
cctgaattcgcccagcgctgtaactaccctcctctgggccaactggctattgacagtgtt
gagcagagtcaagcccaggagaaaacaacagcgaaacgaggacacagcgtctcagaaatt
cttcaagatgagccctccagatccccgactgcctgccccagacgtctgttcagcccctta
tctcaggctaacctctcagcagtttttccctcgtgtcctcgtgttgtctacccaatccag
cccgactcagactctatccacggccatagatatgcgcctctgccatccctgccatcctgc
ggccctccggctgccaaaaggccagctctaagtcgtcctgttccctctgttttgcacttc
agctttgagcacagtcaaggccctgttacagccaaaccttaccaggagccctctgtgcct
gatcgtgttcaccctgctctgaggcgcagtccctattatctgcctcactactcgcccggc
cttaacagcattctacctcattcataccctttctacagtgatcgactgaaacctcacgta
acactctcatctcatttactgccttttgacagctatgcacacctactccatcctctagtc
aacggacacaaagacttgacacttgcactatccagtaccaaacaagacctcattctttca
ccaatcagtgaacaccaagacaacaaggacctcatatccaacaggactaactacctcagg
atcccctcagatgacctcagagatttcaaatactcccctcccagcaacgtccacgcagac
ctcactatacccgccacatccagtgcctcatccatggtcacctcaccccgtggagcattg
ccctctcttgcacccggaggatgctcaccaccggtaggcatggctgcctgctcagatttc
ctcccttccaaacccacctctgccacacagggtaatactgaggacgcgattgacctcagg
aagaccaaacaaggagggcagatcattggctacaagactctgtcttaccctctcaccagg
cagaatggaaagatccgctatgagtgcaacgtctgtggaaaggtctttgggcagctgtcc
aacctcaaggtccatctgcgagtacacagtggagagcgtcccttcaggtgtcagacctgc
aacaagaacttcactcagctggctcacctgcagaaacactacctggttcacacgggagag
aaaccacatgagtgcaaggtgtgccataaacgattcagtagcacaagcaacttgaagacc
caccagaggctacactcgggtgagaggccttatcagtgcaagctctgcccggcccgcttc
actcagtatgtccacctcaagctgcacaaacgcctccacagcggggaacggccttatcgg
tgtccccgctgcccctgtgcctatctccactactgcagcctccaggtgcacctccaaggc
ttctgccccctctccccctctgcctcccacagacactcgccggaggagctacaccgagtc
aactccgagctcgagaggtttgacgtgagcgaggccgctgagcggcttgaggccatggct
gcagaggccgagatggacaaggggaatgtcactgacctaatacagaagatggggactcac
acctcgggccaccaggatggcaccggaggggagactgagctgagcgtttgcaaatcagca
aaggagtgctctggtgttcagctgcgtcatggcagccctctacctctgcatgcaaccagc
atcaagctggagtcaagctgcatatcagagccctaa
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