Seriola dumerili (greater amberjack): 111216556
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Entry
111216556 CDS
T05606
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111216556
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
111216556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
111216556
NCBI-ProteinID:
XP_022593804
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MASPAAGRDVPNAPTRDESLEPSHPEPACQEAQKWIEAVTGKSFGDKDFRSALENGILLC
ELLSAIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLRGSQLFDPGDLQDTSIRANLK
DSDCNRKLKNVLNTVFWLGKAASGCASYTGPNLNLKEFEGLLAQMKMESDEGGDSPQKRS
VRDSGYDCWDSERSESLSPPRHTRDNSLDSLDSFGSRSQHSPSPDVVNRGNSDGRGSDSE
ADAPSRKPDVRKDDMLARRTASSESRSSIPFNQFLPNRTNASSYIPTPRRKPHAEEGEQR
RMSRRVAFMSEDTESVSMSDILNEEEVGHLPPLSQSRYERMHEQYNSFQEDEDHWQNDLA
RWKNRRRSASQELIKKEEERKRMEKRMKQEGSDGNKRKSIKTYKEIVEEKERREAELCEA
YRNAATPEEAAMVLQRYALRFTISDATLDSLKLPRSTSKPKSDLNRVDKEHKPSPPIHDS
ETSEPLHKPEPAAITEPKHSKPEEMETETTVQQESQVSPVNSPPTTVTSSENIPPQSLEL
DEPQSKPTESPTTYQKQPITGNAQPQTEHTASQIAHVQPHTTQPPHTLPSPPSVTSRPVP
LLAAKPYCQPRSTPSGHKPVKMDGLVRVNGEVTEDLPVSTTPAPPQLLPQEIKDVTPKQT
DKDITPKQTDKDQETTEHPPPLQTENSTLSSGSAISSLIGGRNCIITTTIVTELTQTLVE
PHHSDIQSNAQVNGTTGLFGTPAQEKKAQSAPSPSSMQEYSPTVTEGLEESSVTVSISGQ
FQLIETPMLNLAKRVNHWVWDPNEERKRQERWQQEQERLLQEQYQREQEKLKKEWEKAQL
EVEEEERKHNEEERRILEETVTPLNPTSLLNQQSGQTDTTSSAPESNKTEQTDVALQKNS
QSISTGNEDQHESKLHFFQDSVCDGESSKKQELWKTASLDRNPQLNQAHVVKRSGSHDVV
TGKQQSSSSLPSPQPPSPSRCVSGKRLCSGCSQPLGKGAAMIIDTLGLFFHIQCFKCGVC
GGQLGDATAGTDVRIRNGHLSCHECYIATRESELNSSLCYCLYLDTSQRLHHSEE
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggctagccccgccgcaggtcgagatgtcccaaacgctccgacgcgggacgagtcgctg
gagccaagccatcccgaaccagcctgtcaggaagcccagaaatggatagaggctgtaact
gggaagagctttggagacaaggacttccgcagtgcactggagaatggcatcctgttatgc
gagctgctgagtgcaatcaaaccagggttggtcaagaagatcaacagactgcccaccccc
attgctgggctggacaacctgtcagtcttcctgcggggctgtgaggagttgggcctgagg
ggctcccagctgtttgaccccggggacttgcaggacacttctatacgagcaaacctcaag
gactccgactgcaaccgcaaactaaaaaatgtgctgaacacagtgttctggctggggaag
gctgccagcggatgcgcctcctacactggccctaatctcaacctcaaggagtttgaaggg
cttcttgctcaaatgaagatggagagtgatgaaggaggtgacagtccacagaaacgcagt
gttagagacagcggctatgactgctgggactctgagaggagtgagtctctttccccacca
cgacacactcgtgacaactcccttgacagtctggactcttttggctcccgctcacagcac
agtccgtctccagatgtggtgaatcgtggcaacagtgacgggcgaggcagtgactcggag
gctgatgcccccagcaggaagccagatgtgcggaaggatgacatgttggccaggcggacc
gccagcagtgaatcaagaagctccatccccttcaaccagtttcttcctaaccggaccaac
gccagctcctacatccccactccacggcgaaaaccgcatgcagaggagggagagcagcgg
aggatgagccggcgagttgcttttatgtctgaggacacagagagtgtgagtatgagtgac
atacttaacgaggaagaggtgggacacttacctccactgagccagtcacgatatgagcgc
atgcatgaacagtacaacagctttcaggaagatgaggaccactggcaaaatgacttggca
cgctggaagaatcgccgtcgcagcgcgtcacaggagctgatcaagaaagaggaagagagg
aagaggatggaaaaaaggatgaagcaggagggaagtgacggcaacaagaggaaaagcatt
aagacatacaaagagattgtggaggagaaggagcgtagagaagcagagttgtgtgaagct
tacaggaatgcagcgacaccagaggaggcagccatggttttacagcgttacgctctccgc
ttcaccatcagcgacgcaacactggacagcctaaaactacccagatccacctcaaaaccc
aaatcagacctaaatcgggtggacaaagagcacaaaccctcaccacctattcatgactct
gaaacatcagaacctctgcacaaaccagagccagctgctataacagaaccgaagcactca
aaacctgaggagatggagacagagaccactgttcaacaagagtcacaagtttcaccagtc
aacagtccccccaccacagtcacaagctcagaaaatataccacctcagtcattagaactt
gatgaacctcaatccaaacccacagagtctccaaccacatatcagaaacaaccgattaca
ggaaatgcacagcctcagaccgagcacacagcgtctcagattgcacatgtgcagcctcac
accacacagccaccacacacactcccctcccctccatctgtaacctccagacccgtcccc
ctcctggcagccaagccctactgccagcccaggagcacaccgtctggacacaaacctgtc
aagatggatggattggtgcgagtgaatggagaggtgacagaggatttacctgtttccact
acacctgccccccctcagctcttgccacaggagattaaagatgtgactcccaaacagacg
gacaaagacattacccccaaacagacggacaaagaccaggagacgacagagcacccacca
cctctgcagacagagaactcaaccctctcctcaggctctgccatcagctccttgattgga
ggccgaaactgtatcatcacaacaactattgttacagagctcacgcagactctggtggag
cctcatcactcggatatccaaagcaatgcacaggtcaatggtaccacaggtttgtttggg
acaccagcgcaggaaaaaaaggctcagtcggctccatcacccagcagcatgcaagaatat
tctcccactgtcacagagggccttgaggagagcagtgtgactgtgagtatctcagggcag
ttccagcttattgagacccccatgttgaacttggctaaacgtgttaatcactgggtctgg
gaccccaatgaggagcgtaaacgccaggaaaggtggcaacaggagcaggagcgcctccta
caggagcaataccagagagaacaggagaagctgaagaaggagtgggaaaaagcacagcta
gaggtggaggaggaggagcgaaagcacaatgaagaggagagacggattctggaagagact
gtaacacccctcaatcccaccagtttgttgaaccagcagtctggtcagacagacacgact
tcatcagctccagaaagcaacaagacagagcagacagatgttgccctgcagaaaaacagc
caaagcatctccacaggaaacgaagatcagcatgaatcaaagctgcattttttccaggat
tctgtgtgtgatggtgaatcttcaaagaaacaggaactgtggaagacagcatctttagac
cgcaaccctcaactaaaccaggcacatgttgttaaaaggtctggatcgcatgatgttgta
acaggaaaacagcagtcctcctcctccttaccctcaccacagcctccttcacccagcagg
tgtgttagtgggaagagactgtgttctggttgttcccagcctctgggaaaaggagctgcc
atgatcatcgatacactgggactgtttttccacatacagtgtttcaagtgtggagtgtgt
ggcgggcagctgggtgacgccactgcagggactgacgtaaggattcgtaatggacatctg
agctgtcatgagtgctatattgcaactcgggagtctgagctgaattcctctctgtgttat
tgcctctacctggacacgtcacagcgtcttcatcactcagaggaatag
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integrated database retrieval system
