Seriola dumerili (greater amberjack): 111216588
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Entry
111216588 CDS
T05606
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111216588 (lrba)
Membrane trafficking [BR:
sdu04131
]
Endosome - Lysosome transport
Others
Others
111216588 (lrba)
Endosome - Golgi transport
111216588 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
111216588 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
SUKH_6
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
111216588
NCBI-ProteinID:
XP_022593862
LinkDB
All DBs
Position
Unknown
AA seq
2955 aa
AA seq
DB search
MASEETAGAAQPGDGKDGRSGAMALNPGVPIRGIRMKFAVLAGLVEVGEVSNRDIVETVF
NLLVGGQFDLEMNFIIQEPESIMCMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQACTD
VELIQLVLQRISTTDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGEEGQWPRHAVKL
LSVLKYMAHRNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKD
KPYLYCFRTSKGLGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTLVHIYNR
WKNSEISCYVNGELASFGDIAWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFGEA
LSAAQILAIYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLSSSIAFTYNPRATDAQL
CLESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYCQPSS
HELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRPVLEIVLA
FSRYLSNLQNGILLLKQLCDHILFNPAIWIHAPAKVQLTLYTYLATEFISTVTIYNAIRR
VGTVLQVMHTLKFYYWVVNPQDRSGVIPKGLDGPRPNQKEILSLRAFLLLFVKQLIMKDH
GVKEDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHPGSMVQAFDQRNGIRVIYKLLAS
KSEGIRVQALKVMGYFLKHLSPKRKSEVMLSHGLFSLLTERLMLHSSQFTMTTYNVLFEI
LTEQICTQVIHKQHPDPDSTVKILNPQILKVIAALLKNSPPSPESMEVRRVFLSDMIKLF
NNSRENRRSLLQCSVWQEWMLSLCFINPRNSEEQKITEMVYAIFRILLYHAIKYEWGGWR
VWVDTLSITHSKVTFEQHKENLSRMFRQYQRQESGASLSTIRTVSGVSQSSETTECVNGP
PAEEAAPSTVIELTVDELSQKSPDSASSSTIPSSPLESADERGHASITVSNILARPEEEE
QRLAQGSSKDGSGDGKETEATVTQKTDTEELSEENNKQEAVTESSTDKDNDNLQRNTSNT
PEAADTKAVEVVGDSTTTPTDGEKCESEHNKDKSSTSMTEDSLNEADTEVPVVSEHEGRT
DQASPETAACLENSVLGGASVFNEDLVDVSSVSDQIHPSDADDSQEESSYASAAAGEEAE
VLKKEEGKHEDDEGNKNDQEGQELKTEEEKDEKQEVSMHEKTGESQAEEKQVSNLEGQTP
PTETPEQIVTEAPKEKVKDEQSSPTAETSTSEQQPSDSTLPSTAQEVAAASASTSFSQPS
ETSGTAGEETSSSAPHSSTTASTSDTQKSADSVSKTKEIKIARLDVSNVALDTERLELKE
TSTTETSQGQPAAAAAAAGGGSSSGQPRESGTSAPRSTMFRIPEFRWSHMHQRLLTDLLF
SIETDVQMWRSHSTKTILDFVNSSENVVFVHNSIHLISQVVDNLIMACGGILPLLSAATS
SSHELENIEPSQGLAVEASVTFLQRLVNLVDVLIFASSLNFTEIEAEKNMSSGGILRQCL
RLVCAMAVRNCLECQQAQFNHGTEGSASNYTAMPSTVLGTAKSASAQSPVDAVTGGMSPV
RDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKKH
PQRSQSARSTDSGAISGGLEVENGVSLRRYDSGIGDDHTSAAASEADLSSSVVTHGPDAI
SEALSTLSSEVRPAQPADSKGKNVKDILRSLVSAPTDDIMVDPSLLPPAFLGSVGDAARE
SSQFLFDRSVVVAPKKAGLMTSSGTSTPVPAATAASVSAGTPIDSVALVSSGDASQSTPA
DSAATGGQVPASASLPSVPPLSPVTQNTAPNMSISERLEHALEKAAPLLREIFVDFAPFL
SRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGR
LLSHTMKDHLVRVANEAEFILSRQRAEDIHKHAEFESNSAQYAAEKRDEEKMCDHLIRAA
KYRDHVTATQLIQKIVNILTDKHGAWGNSSISRPREFWRLDYWEDDLRRRRRFIRNPFGS
AHSEATLKAAAEHVADISASEEDILKGKQSIRSQALGNQNSESESLLDGDDDTLSSLDEK
DLENLTGPVNLSTSVQLVAPAVVVKGTLSITASELYFEVDEDEPCFKAIDPKILAYTEGL
HGKWLFTEIRAVFSRRYLLQNTALEIFMANRTAVMFNFPDPATVKKVVHSLPRVGVGTNF
GLPQTRRISLATPKQLFKASNMTQRWQRREISNFEYLIFLNTISGRTFNDLNQYPVFPWV
ITNYDSEELDLTLPSNFRDLSKPIGALNPKRAAFFSDRYESWEDDQVPKFHYGTHYSTSS
FTMMWLLRIEPFTTFFLNFQGGKFDHADRTFSSVSRAWRNCQRDTSDVKELIPEFYYLPE
MFVNANSYNLGVMEDGTVVSDVELPPWAKSPEEFVRINRLALESEFVSCQLHQWIDLIFG
YKQQGPEATRALNVFYYLTYEGAVNLSSINDPMLREAVESQIRSFGQTPCQLLIEPHPPR
SSAMQVTPLMFTEQMQQDVIMVLKFPSNSPVTHVAANTQPGLTSPAIITVTANRLFAVNK
WHGLTGHQSSTVQDQQYQLPVEIDPLIASNMGSHRRQISDLLDQSIQISSQCFIITADNR
FILLCGFWDKSFRVYSTDSGKLTQIVFGHRDVVTCLARSESYIGGDCYVLSGSRDATLLL
WYWNGKHSSIGESPGTEFTTPRAILTGHDCEVTCASVCAELGLVISGCKEGPCLIHSMNG
DLLRTLEVPERFTRPRLIQSSTEGHCVIYYDKGQFCLFSVNGKLLGHMEIEDSIKAMLLS
RDGQYLLTGGDGGVVSVWQVHNLKQLFTYPGCDAGIRSMAMSHDQRCIITGMASGSIVLF
YNDFNRWHHEYQTRY
NT seq
8868 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacagcgggcgctgcgcagccaggtgatggaaaggacgggagatca
ggcgccatggcgctcaaccccggagtgcctatcagggggataaggatgaaattcgccgtg
ctggctggcctggtggaagttggggaagtttccaaccgagacattgtggagactgtgttc
aacctgctggtcggtggacagtttgacctggagatgaacttcatcatccaggagccggag
agcatcatgtgcatggttgagctgttggacaagtgtgagcccacctgtcaggccgaggtc
tggagcatcttcaccgccatcctcaagaagagtgtccgcaacctgcaggcgtgcactgac
gtggagctcatccagctggtgctgcagcgtatatccaccactgacagtatgatcgcagac
ctacttgtggacatgctgggtgtgcttgccagctacagcatcacagtgaaagagctgaag
cttttcttcagcaaactacaaggggaggaaggccagtggcctcgtcatgcagtgaagctt
ttgtcagtgctgaagtacatggctcacagaaacggtcctgactccttcttcagctttcca
gggaaaaatgcagctgcgatagctctgcctcccatagcgaaatggccataccagaatggg
tttacattccacacgtggctccgcatggatcctctcaacaacatcaatgtagacaaagac
aagccttacctgtactgtttccgcaccagcaaaggcctaggttactctgcgcactttgtg
ggcggctgtttgatagtgacctcattaaaatccaagggaaaaggattccagcactgtgta
aagtacgacttcaaaccacagaagtggtacatggtgactcttgttcacatctacaaccga
tggaagaacagtgaaattagctgctatgtgaacggggaactggcttcctttggagacatc
gcctggtttgtcaacaccagtgacacatttgacaagtgtttcctgggatcgtcagagacg
gcagatgccaaccgtgtgttctgtggacagatgggggcagtttacctgtttggagaggct
ctcagtgctgctcagatcctggccatctatcagctgggtccaggttaccagggcacattc
aagtacaaggctgagagtgacctgctgtttgcggagcatcataaaacgctactgtatgat
ggcaagctgtcctccagtatcgccttcacgtacaaccctcgcgccacagatgctcagctc
tgcctcgagtcctcccccaaggacaacgcctccattttcgtccattcaccccatgcgctc
atgctgcaggacgtgaaggctgtggtgactcactcagtccagagtggaatacactctatt
ggaggcgtgcaggtcctcttccctctgtttgcacagctggattattgccagccttccagc
catgagctggacacctctgtctgctgcactttgctgtcctttgtgatggagctcttgaag
aactcagtggctatgcaagagcaggtcctggcctgcaaaggctttctcgtcattggctac
actttggagaagtcttccaaggtgcatgtgacgcggcccgtcctggagattgtgctggcc
ttttcgagataccttagcaacctgcagaatggcatcttgctgctcaagcagctgtgtgac
cacattctgttcaaccctgccatctggatccatgcccctgccaaggtgcaactgacacta
tacacttacctggcgacagagttcatcagcaccgtgaccatctacaacgccattcgcagg
gtgggcactgtgctccaggtcatgcatacactgaaattctactactgggttgtcaaccca
caggaccgcagtggggtcatccccaaaggccttgatggtccgaggccaaaccagaaggag
atcctgtctctgcgagcctttctgttgttgtttgtcaaacagctcataatgaaagatcat
ggagtcaaagaggacgagctacagagcatcctcaactacctccttaccatgcatgaggat
gacaatctcatggatgtgctgcagttgttagtggctctgatgtctgaacatcctgggtcg
atggtccaggcctttgaccagcgcaatgggattcgtgtgatttacaaactcttggcctct
aaaagtgaaggaataagagtgcaggcgctcaaagtgatgggctactttctgaaacatttg
tcaccaaagaggaagtctgaggtcatgctgagtcacggcctcttctctctgctcactgaa
cgcctgatgctccactccagccagttcaccatgacaacctacaacgtgctcttcgagatc
cttacagagcagatctgcactcaagtgatccataaacagcatccggaccccgactccact
gtgaagattctcaacccacagattctgaaggtaatagctgctctgctgaagaactctccc
ccatcccctgagagcatggaggtgcgccgggtctttctgtcagacatgatcaaactgttc
aataacagtcgagagaaccgcaggagcctgctgcagtgctcggtgtggcaggagtggatg
ctctctctgtgcttcatcaacccgcgaaacagcgaggagcagaaaatcacggagatggtg
tacgccatcttccgcatcctgctctaccacgccatcaaatatgagtggggtggctggcgc
gtctgggtggacaccctgtccatcacccactccaaggtaacctttgagcagcacaaggag
aatctgtcccgcatgttccgtcagtaccagcgacaggagtctggagcctctctcagcaca
atccgaaccgtctctggtgtcagccaaagctctgagaccacggagtgcgttaatgggcca
cctgcagaggaggcggccccttccactgtcattgagcttacagtggacgagttgtcccag
aagtcccctgactcagcatctagttccaccatcccctccagcccgctggagagtgctgat
gaaaggggacacgcatccatcactgtgtccaacatcctggcaaggcccgaggaagaagag
cagaggttggctcagggttcttccaaagatggctcaggtgatggaaaagagactgaagct
actgtgacacaaaaaactgacacagaggaactgagtgaagagaacaataagcaggaagca
gtgactgagtcttccactgataaggacaatgataatctacaaaggaacactagcaacacg
cctgaagcagctgacacaaaagcagtagaagtggttggtgactctactacaacaccaaca
gatggtgaaaaatgtgagagtgaacacaacaaagataaatcatcaacctccatgacagaa
gactctttaaatgaagcagacacagaagtgccagtggtttcagaacatgaaggtaggact
gaccaagcctcccctgagactgcagcctgtctggagaacagtgtgctgggtggagcgtct
gttttcaatgaggacctggttgacgtgtcgtctgttagcgaccagatccatcctagtgat
gctgatgatagccaagaggagtcctcttacgcttctgctgctgccggagaggaggcggaa
gtattaaaaaaggaggaaggtaaacatgaagatgatgaaggcaataaaaatgatcaggaa
ggacaggagttgaaaacggaagaagaaaaagatgagaaacaggaggttagcatgcatgaa
aaaactggagagagtcaagctgaggagaaacaggtgtctaatttagagggtcagactcct
ccaacggaaacacctgaacaaattgtgacagaagcacccaaagaaaaagttaaagatgaa
cagtcttccccgacggctgagacctccacttcagagcagcagccctcagacagcacacta
ccctctacagcccaggaggttgcagcagcatcggcctcaacttctttcagccagccctcc
gagaccagcggcaccgctggagaggaaacctcgtccagtgccccacacagcagcaccacc
gcctcgacctctgacacgcaaaagagtgccgactctgtcagcaagaccaaagagattaaa
attgccagactggatgtgtccaatgtggccttagacacagagagacttgaactgaaggag
acctctacaacagagacaagccaaggccagccggcagcagcagcagcagcagcgggaggg
ggaagttcgtcgggtcagccgagagagagcggcacctcggctcctcgctccaccatgttt
cgcatcccagagttccgctggtcccacatgcatcaacgcctcctcactgacctgctcttc
tccattgagacagatgtccagatgtggaggagtcattccacaaagacaattctggacttt
gtgaacagcagtgagaacgtggtgtttgtccacaacagtatacacctcatctcccaggtg
gtggacaacctcatcatggcttgtggaggcattttacctctgctctctgctgccacctcg
tcttctcatgaactggagaacattgagccatcccaaggcctggcagtggaggcttcagtc
accttcttacagcgcctcgtcaacctcgtggatgttctcatctttgccagctccctcaac
ttcacagagatagaagcagagaagaacatgtcgtcaggaggcatcctccgacagtgcctt
cgccttgtgtgtgcaatggcagtgagaaactgtctggagtgtcagcaagcccagtttaat
catggcacagaaggctcggcctccaactacacagccatgcccagcactgtgctcggaaca
gccaagtctgcctctgcacagagtcctgttgatgcagtgacaggtggaatgtctccagtc
agagacctggaccggctgcttcaggacatggacattaaccgcctcagggccgtcgtcttc
agagatattgaggacagtaagcaggctcagtttctggctcttgctgtggtgtacttcatc
tcagtcctcatggtgtccaagtaccgtgacatcctggagccccacaatgacaagaaacac
cctcagcgatcccagtctgccaggagcacagatagcggtgccatttctggtggattggaa
gtagagaacggcgtctctctccggcggtacgactctggcatcggtgatgaccacacctca
gccgctgcgagcgaggcagacctgtcatcctctgtcgtgactcacggtccagacgccatc
tcagaggccttgtccacgctgtcgtctgaggtcagacctgctcagcccgctgattcaaag
ggcaagaatgtgaaggacattctgcgcagcctcgtgagcgctccaactgatgatatcatg
gtggacccaagcctgctgccaccagcgtttctaggaagtgtgggcgatgcggctagagaa
tcgtcgcagttcttatttgatagaagtgtcgtcgttgcacccaagaaagccggcctgatg
acatcttcaggcacttccactcctgtcccagcagccactgctgcctctgtgtccgctggg
acacctatcgacagcgtcgccttagtatcttctggcgacgcctcccagagcacccctgcg
gactctgcagctacaggcggccaggttccagccagcgctagcctgccatctgtcccccca
ctctcccctgtgacccagaacacagcccccaatatgagtatctcagaacgtctggagcac
gctctggagaaggcggctcctctgctgagagagatctttgtggactttgccccctttctc
tctcggaccctgctgggcagccacggacaagagctcctcattgagggcaccagcctggtg
tgcatgaagtccagcagctcagtagtggaactcgtcatgctgctgtgttcacaggaatgg
cagaactccatccagaagaatgcaggtcttgcctttatcgaactggtcaatgagggaaga
ctgctgagtcacaccatgaaggaccacctggttcgtgtggctaatgaagccgaattcatc
ctcagccgacagagggctgaagacatccataaacacgcagagtttgagtctaacagtgct
cagtacgcagcagagaagcgagatgaggagaaaatgtgtgaccaccttattcgagccgcc
aagtaccgcgaccatgtgacagccacacagctcatccagaagatagtcaacatcctgact
gacaaacatggagcctggggaaactcctccataagccggccgagggagttctggcgcctg
gactactgggaggacgatttaaggcggcgacgtcgcttcatcaggaacccctttggatcc
gctcactcagaggctacgctcaaagccgcggccgaacacgtggctgatatcagtgcgtcc
gaggaggatattctcaaaggcaagcagtccatcaggagtcaggctctgggaaatcaaaac
tcagagagtgagtcattactggacggagacgatgacactctgtccagcttggacgagaag
gacctggagaacttaacaggcccagtaaacttgagcaccagtgttcagctggtggctccg
gccgttgtggtgaaaggcaccctgtccatcaccgcctccgagctctacttcgaggtggat
gaggacgagccgtgcttcaaggccatcgatccaaagattctagcctacacagaaggtctt
catggaaaatggctgttcacagagatccgtgccgtcttttccaggcgctacctgctgcaa
aatactgctctggaaatcttcatggccaacagaactgcggtcatgttcaacttcccagat
cccgccaccgtaaagaaggtggtccacagtcttcctcgtgttggggtgggcacgaacttt
ggccttccacaaaccaggcgaatctccctggccacaccaaagcagctattcaaagcctcc
aacatgacccagcgctggcaacgtcgggaaatctccaactttgagtacctcatctttctt
aacaccatctctggtcggacctttaatgacctaaaccagtacccagtcttcccatgggtt
atcaccaactacgactcagaagaacttgacctcaccctgcccagcaacttcagagatctg
tctaagcccatcggtgctctgaatcctaagagggcggcattcttttcagaccgatatgag
tcctgggaggatgatcaggtgcctaagttccactatggcacccactactccacctccagc
ttcacaatgatgtggctgctacgtattgaacccttcactacattcttcctcaacttccaa
ggaggaaagtttgaccatgcggaccgcaccttctcatcagtgtcccgcgcctggaggaac
tgccagagagacacatctgatgtgaaggagctgattccagagttctactacctccccgag
atgtttgtcaacgccaacagttacaacctgggagtgatggaagatggcacagtggtctct
gatgtggagctgccaccctgggccaagagcccagaggagtttgttcgaatcaatcgcctg
gctctggagagcgagttcgtgtcctgccagctccaccagtggatcgatctgatatttggc
tacaagcagcagggtcccgaagccacgagagccctaaatgttttctattatctgacctat
gaaggcgcagtcaacctcagctccatcaacgaccccatgctcagagaggctgtggagtct
caaattaggagttttggacagaccccctgccagttgctcattgagccacacccacccaga
agctcagccatgcaagtgaccccgctgatgtttacggagcagatgcagcaggatgttatc
atggtgttgaagttcccttcaaactctcctgtgacccacgtagcagccaatacccagccg
ggtctaacgtcacctgccatcatcactgtcaccgccaaccgcctctttgctgtcaacaaa
tggcatggcctgacaggtcatcagagctcaacggtgcaggaccagcagtaccaacttcct
gtggaaattgacccgctgatagccagtaacatgggcagtcaccgtcgccagatctcagac
ctgctggaccagagcattcagatcagctcacagtgtttcatcatcacagccgacaaccgc
ttcatccttctgtgtggcttctgggacaagagcttccgggtctattccactgactcaggc
aaactgactcagatagtgtttgggcatcgtgacgtggtgacgtgtctggctcgctctgag
tcgtacatcggaggagactgctacgtcctttcaggctctagagatgccaccctgctgctg
tggtactggaacggaaagcacagcagcattggagagagcccaggcacagagttcaccaca
ccacgggccatcttaacgggccatgactgtgaggtgacatgtgcaagtgtatgtgccgag
ctgggtcttgtcattagtggctgcaaagagggtccttgtctgatccattccatgaatggg
gacctgctgcggaccctggaagtccctgagcgcttcacacggccccgcctcatccagtcc
tccaccgagggacactgcgtgatctattacgacaagggacagttttgtctcttcagtgtc
aatggcaaactgctgggacacatggaaatagaagacagcatcaaggccatgcttctcagt
cgtgatggccaatatctgctaacaggtggagatggaggtgtagtatctgtctggcaggtc
cacaacctcaagcagctcttcacctaccctggctgtgatgcaggaatccgatccatggcc
atgtcgcatgaccaaaggtgcatcataactggcatggcatctggaagtatcgtgctcttc
tacaatgacttcaacaggtggcaccatgagtaccagacaaggtactga
DBGET
integrated database retrieval system
