KEGG   Seriola dumerili (greater amberjack): 111216680
Entry
111216680         CDS       T05606                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04144  Endocytosis
sdu04517  IgSF CAM signaling
sdu04530  Tight junction
sdu04810  Regulation of actin cytoskeleton
sdu05100  Bacterial invasion of epithelial cells
sdu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    111216680
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111216680
  09144 Cellular community - eukaryotes
   04530 Tight junction
    111216680
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    111216680
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    111216680
   05100 Bacterial invasion of epithelial cells
    111216680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdu04131]
    111216680
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sdu04812]
    111216680
Membrane trafficking [BR:sdu04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    111216680
Cytoskeleton proteins [BR:sdu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     111216680
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML EIF3I Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR75_1st eIF2A Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st RMC1_N PEP5_VPS11_N Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Tricorn_2nd Beta-prop_SPT8
Other DBs
NCBI-GeneID: 111216680
NCBI-ProteinID: XP_022594016
LinkDB
Position
Unknown
AA seq 380 aa
MAYHSFLLEPISCHAWNKDRTQIALCPNNHDVHIYKKDGTKWTKIHELKEHNGQVTGIDW
APDSNRIVTCGADRNAYVWTLKEGTWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEMLFESGGSGAADQSSGGGGGWVHSVCFSHSGNRLAWTSHDSTVSVAE
GGKTGTVNSLSSETLPLLCVTFITENSLVAAGHDCYPVLFVYDGAKGSLTFGGKLDVPKQ
AAQKGISARERFQNLDRRASETQSTDKELNTLHKNSISQISVLEGGRNQCTKFCTTGMDG
GMGIWDVKTLESSMKNLKIV
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggcgtaccatagtttcctgctggaaccaattagctgccatgcctggaacaaagatcgg
acccagatcgccctttgccccaacaaccatgacgtccacatctacaagaaagatgggacc
aagtggaccaagattcatgagctgaaggagcataacgggcaggtgacaggtattgactgg
gctccagacagtaaccgtatagttacttgtggagcggaccgtaacgcctacgtgtggacc
cttaaagagggcacctggaagcccaccctggtcatcctcaggatcaatcgcgctgctcgc
tgtgtgaagtggtcaccgaaggagaacaagtttgctgtaggcagcggctctcgcctgatc
tccatctgttactttgagcaggagaacgactggtgggtgtgtaagcacatcaagaagcca
atccgctccaccatcctcagcctggactggcatcccaacaatgtccttctggctgctgga
tcctgtgacttcaaatgcagggtgttttcagcctacattaaggaggtggaggaaaagcct
ggccccactccctggggcagcaagatgccgttcggggagatgctgtttgaatctggaggg
tctggagctgcagatcagagttcaggaggaggcggcggttgggtgcacagcgtgtgcttc
tcacactctggcaaccgcctggcctggacctcccatgactccactgtgtctgtggcagag
ggaggcaagaccggcacggtgaacagtctgagctctgagacacttcctcttctgtgtgtc
accttcattactgagaacagcttagtggccgccggccatgactgttacccggtgctgttt
gtgtacgacggtgccaagggcagcttgacatttggtggcaagctggacgtccctaagcag
gcggcccagaagggcatcagtgccagggaacgtttccagaacctggaccgccgggcctca
gagacccagagcaccgacaaggagctgaacaccctgcacaagaacagcatcagccaaatc
tcggtgctggaaggaggaagaaaccagtgcaccaagttctgcaccactggcatggatgga
ggaatgggcatctgggatgtcaagactctggagtcctcaatgaagaacttgaagatagtc
tga

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