Seriola dumerili (greater amberjack): 111216787
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Entry
111216787 CDS
T05606
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111216787
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111216787
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111216787
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
YVC1_C
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
T4SS_AnkD
NOL11_N
Motif
Other DBs
NCBI-GeneID:
111216787
NCBI-ProteinID:
XP_022594125
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MENGHPQDKEEPNKGQEEEGNSLDWLLGKDSSEIIPAPMDTNVLLSGQKRSSVDNICVKV
FTRERVFEAVSQGDTSQLNGLLNYLRVNDKQLTSPEYETNGKTALLKALLNLKDGKNDTI
EILLGIAEETGDLENLINASYKDSCYKGQTALHVAIERRSFDHVKLLVQKGADVQAKANG
RFFQHNAGLGFYFGELPLSLAACTNQPDIVSFLMDNPHRGADLTDKDSQGNTVLHTLVVI
ADNTKENTDMVARMYDEILILHHKLEKTTKVKLEAIENDQGLTPLKLAAKLGKIGLFRHI
LQREFVDEEMRPLSRKLPEWVYGPVHSSLYDMSSIDTNEDNSVLEIVVFGSEIPNRTEML
QIEPLHSLLEDKWDRFASKLFLMNFLVYLIYLITFTTVAFYRKEGQPPFPVENTPVDHLR
CMGELISVLGAAWFFYKAIVIFKRNPPNFKALYTDGFCDILFFLQATLLLICAILYSCGR
REYVGLLVLSLALAWINVLYYSRGSKQMGMYSVMMQRMILGDLLHFLCVYGVLLFGFSAA
IVALIEDSAPTLADGTPAHGRSFAADTFKCKKPSYNDIRFTTLELFKFTIGMGDLEFTDH
VQYKEVFYILLILYIVLTYILLLNMLIALMGNTVERISKESENIWNLQRAFTILDMERTL
PRGLKSKLYSGVSKMVCLRGENDECRRFFRVEEMNWRQWKSDLGVIREEDPGNQMMKPQP
NDQTLGYRWNLNPLLERIRSGRRPPQHSSVPRV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatggacacccacaagacaaagaggagccgaacaaaggccaagaagaggagggg
aatagtctggattggctccttggaaaagacagctcagagatcattcctgcacctatggac
accaacgttttactgtctggacaaaagcgttccagtgttgacaacatatgcgttaaagta
ttcaccagggagagagtctttgaagcagtttcccagggggacacaagtcaacttaatggc
ctgctcaactacctgcgagttaatgataagcaacttacaagcccagaatatgaaacaaat
gggaagacggctctcctgaaagcgttgctgaatctaaaagatggtaaaaatgataccatt
gaaatactccttggcatagcagaggagaccggagatttagaaaatttaatcaacgcgtct
tacaaagattcttgctacaaaggtcagacagccttgcatgttgccattgaaaggaggagc
tttgaccatgtgaaactgctggtccagaaaggagcagatgtgcaggccaaagccaatggg
aggttcttccagcataatgcaggactgggcttttattttggagaacttccactgtcactg
gctgcctgcaccaaccagcctgatattgtgtctttcctaatggataaccctcacagagga
gctgacctgactgacaaggactcacaaggaaacactgtcttgcacaccttggtggtcata
gcagacaacacaaaagaaaacacagatatggttgcaaggatgtatgacgagatcctcatt
ctgcaccacaaactggagaaaacaacaaaggtcaagctggaagctattgaaaatgatcag
gggttgactcctctgaagttagcagccaagcttggaaagattgggctgttcaggcacatt
ttgcagcgggaatttgtggatgaggagatgaggccgctgtccaggaagttaccagaatgg
gtctatggacctgttcactcctcactttatgatatgagttccatcgacaccaacgaagac
aactctgtgttggagatagtcgtctttgggagtgaaattccgaatcgtactgagatgctg
cagatcgagcctcttcacagtcttctcgaggataaatgggacaggtttgcttccaaacta
ttcttgatgaattttttggtgtatctgatatacctgatcaccttcaccactgtggccttc
tacagaaaggagggacagccaccgtttcccgttgaaaacaccccggttgaccacctccgc
tgcatgggtgagctcatcagtgtccttggagcagcgtggtttttctataaagcgatagtt
attttcaagaggaaccccccaaacttcaaggctctgtacacggatggattctgtgacatt
ctgtttttcctgcaggcgacactcctcctgatctgcgcaattttgtacagctgtgggcgg
agagagtatgttggactccttgtgctctcactggctcttgcctggatcaatgtcctttac
tactcaagaggatctaaacaaatggggatgtacagtgtcatgatgcaaaggatgatcctg
ggtgatctgttacacttcttatgtgtctatggtgtcttgctctttggattttctgcagct
attgttgcactcatagaagactccgctccaactctggccgatggcacaccggcacatgga
aggagctttgctgccgatacattcaagtgcaagaagccaagttacaacgacatccgcttt
acgacactggaattgttcaagttcactattggaatgggagatctggagttcaccgaccac
gttcagtataaggaggttttctacatcctgctcattttgtacatagtcctcacttacatc
ctgctgctcaacatgctcatagccctgatgggcaacacagttgaacgaatctccaaagaa
agtgaaaacatctggaacctgcagagagcctttacaattttggacatggagaggactctg
ccgaggggcctgaaaagtaaactgtactcaggagtgtcaaagatggtgtgtctgagaggc
gagaatgatgagtgtcggagatttttcagggtggaggaaatgaattggagacaatggaag
tcagaccttggtgtaatccgagaggaagaccccgggaatcaaatgatgaagccacagccc
aacgaccagactctcgggtaccggtggaacctaaatccactcctggagaggattcgttcc
ggacgtcgcccaccacagcattccagcgttcccagggtttaa
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