Seriola dumerili (greater amberjack): 111216938
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Entry
111216938 CDS
T05606
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111216938 (rffl)
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
111216938 (rffl)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
111216938 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
zf-RING_5
Prok-RING_4
FYVE_2
Phage_lysis
PRCC
Motif
Other DBs
NCBI-GeneID:
111216938
NCBI-ProteinID:
XP_022594319
UniProt:
A0A3B4TSR6
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MWASCCNWLCMDSADVEHTGEGERRNQSYSNSAFTSQPSSPLPEHTCKACGGRFDTPAKK
HVCMDCKKNYCSRCSAQMEPRPRLCHTCQRFYGNLLERAELMKLKVKELRDYLHLHEVST
HLCREKEELVELVLGQQSSPSSGSAPETPDPPSVSSDPPISTLTPDPPTPTPILTPDPPA
AQPEAPNPPTETAPAEPEVQEEDQTWDPEEPQVLGRRASLSDLSSLDDIEALSVRQLKEI
LSRNFVDYKGCCEKWELMERVSRLYQDQQNLLAANTVSAEESGCSAAGLEENLCKICMDS
PIDCVLLECGHMITCTKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcgtcctgctgtaactggttgtgtatggactcagctgatgttgaacacactggt
gaaggtgagcgtcggaatcagtcctacagtaactcagcgttcaccagtcagccatcttct
cctctacctgagcacacctgtaaggcctgtggggggcgttttgacacacctgccaagaag
catgtgtgtatggactgtaagaagaactactgcagtcgttgctctgcccaaatggagccc
cgcccccgcctctgtcacacttgtcagcgtttctacgggaacctgctggagcgggctgag
cttatgaagctcaaagtgaaggagctcagagactacctgcacctgcatgaggtctccacc
cacctgtgcagagagaaggaggagctggtggaactggtcctggggcagcagtcttcacca
tccagtggctcagcccccgagactcctgaccccccctctgtgagctcggacccccccatc
tccaccttgacccctgatccccccacacccaccccgatcctgacccctgaccctcctgct
gcacagcctgaagccccgaaccctcccacagagaccgcccctgctgagcccgaggttcag
gaagaagaccagacctgggaccccgaggagcctcaggtcttaggtcgcagagcctctctg
tcggacctgagcagtctggacgacatcgaggcgctgagtgtccgacagctgaaggaaatc
ctctccaggaactttgtggactacaaaggatgctgtgagaagtgggagctgatggagaga
gtgagccggctgtaccaggatcagcagaacttactggctgccaacaccgtgagcgctgaa
gagtctggctgcagcgctgcaggtctggaggagaacctctgtaagatctgcatggactct
cccatcgactgcgtcctgctggagtgtggtcacatgatcacctgcaccaagtgcggcaag
aggatgagcgagtgtcccatatgccgccagtacgtcgtcagagccgtgcacgtcttcagg
tcctga
DBGET
integrated database retrieval system
