Seriola dumerili (greater amberjack): 111216987
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Entry
111216987 CDS
T05606
Symbol
bicra
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111216987 (bicra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111216987 (bicra)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
111216987 (bicra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
111216987
NCBI-ProteinID:
XP_022594391
LinkDB
All DBs
Position
Unknown
AA seq
1900 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSETHGHVPEVQPAVQLSASEPAGLPRVSVDLDFLE
DEDILGGSPGGEGGSNGIGTNHEPCDILQQSLAEANITEQSLQEAEAELDLGSFGIPGLT
QVVQTLPDASLSGAGGAAVGVGIGVGVGGTAAIFPGSAPSTTATPPNATADMLGSVLAQQ
GLQLQSQVMNKAISVQPFMQPVGLGNVTLQPISSLQALPNGSQSGHLGIGQIQVVGQPTV
MTINQSGQPILAKAMGGYQLHQSGPEVSGAGSQAGLGGSGGGLLIQGNKATLGSPALNGP
AVCVSSTNSSSGGTMTAPAGLVGFGSNPLSSGIGAQTQTQGQIMQNVIIQRTPTPIQPKP
PQGGAIQTKLFKQQQPQQQPQPAPQPLQNDAHKALGLQQLPVSAAQNVAFLTGKAGSNVV
LSTQATTQGPQFQQTLFKQQAAQPSGKPLSVHLLNQSGSIVIPPQTVLQGQNHQFLLPPL
QAGGQILTQHPGGHIITSQGPGGQLIANQILTANQNINLGQVLTSQGHPGAAHILSGPIQ
LQPGQMGTPTLFQMPVSLAQSQSQTQTHTVSGHTQTVIQGMPIQNSLTMLSQVEGLSPAV
TLQPALQPQPGGVPSSSSTGAATMAQSQPGECVTVLGSTTDQAAHPTQQHVPQSSILAMQ
PASSVSAAITVPSSSPSMSVSTSSSVTAVGLVPPQAQHSPGRLLLTNQGSSMILSQESLQ
MFLQQEQHHQTENESTPSVGVPASVIVSSNNITALAPAVHDSQLTDSWVGQSHSPSPGPS
HMTAVVKQVPTSGHQQPLKIQGMSPSTALTTHTTAPPVADSPQPSQSPLTLSQQIQSPHH
QQQSRPPSQPQPQSQTPSRSCTPSSHPPLFIVHNQIAESPQPAAQGQPQQTQLQQAHIQV
QLQTQPRPASQPAPYQQDMPPVSQSPKPPPAPPAQHQFTASPVSTSTTAVVKTQVPIQGL
TAEQQHHLQLVGAQIQTLSGITQPSPQQKQLLDKLHQVQQNILLQAKQPVQPQPQATSQF
SSQQDVPVDKAAITSTASTGTPAQLPSVLKPTSVLVKTPATASSDLQVFSGAQGPAGAMV
NQTVTPASLTQPAQVQPKPGVISSVGGMTLGKGGMQIQVLGASLTQMPAPQPPAPAQTQT
PTMKMPFSAEPSKEARMLEQLRKQQGSVLHPNYSAPFHSFEDTLHRLLPYHLYQGTANSS
QDYQRVDDEFERVSCQLLKRTQAMLDKYRHLLFAESKQRLGPSAEMVMIDRMFIQEEKIA
LNQDRILAKERPEEFVANARMLESVVSSQEKSSSAEHTSVSGGVAAAAPAPASAAPAPAP
LPNITPNPPPAPAQVPVPVPAPAPAPAPAPAPAPATAPAPAPPPPAPAPAPPATSSVTPF
PPTKLVIKQGGGGASVSWSSSCPPPPAAAGKPVAEPTSQCSSFSRAPAASSSFSSSSFNS
QAADDDDALPQRTSKPPIKTYEARRRIGLKLKIKQDQTGFSKVVHNTALDPVHTPQPQQS
SQSISQSQTQPQPQPEAAVPHPKSHPLSTPPTTVIRTQSPVCTASSASSVTIATTQCNPP
LRSNVPPNAAPSSSTSSSHTWSSSSSSTSSTQMNGTLDHHGMGGVKHNPASTANPSPTTC
RLPLRKTYRENISPRVRPGVPGGGDESLSYPRPTPSPPRHEASSPPSERTVIASVKVEKR
GREASHTHTESSHETGRLGSAMQGLDEVDEVFNRGIKTTQHHHLPQLLDKEGAKERVAEH
TDQETDVSKYKRAGGKNRHRVGGTFRMDQHAPGPPSPESSFTRDSLLPAKRCKSDSPDMD
NASFSSGSPPDDSLNEHLQCAIDSILNLQQEPSARGHHIKGGNSRPHQHQSQRPGGSAAS
SHRPSVPPPSSASSSSSLAQHPQVGGRGHNGSLVPQTQSR
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagacggcaggtgccttctagatgtaatttgtgacccagaagctctcaat
gactttcttcatggatctgagacccatggccatgttccagaggtccagcctgcagtccag
ctgtcggccagtgagccggcaggcctgcccagagtcagtgttgacctggacttcttggag
gatgaagacatcttgggaggatccccaggtggtgaaggtgggagcaatggcattgggaca
aatcacgagccgtgtgacatcctgcagcagagcttggctgaagccaacatcacagagcaa
agcttacaggaggcagaggctgagctggacctgggctcttttggaattccaggccttaca
caggttgttcagacactgcctgatgccagcctctctggggctggaggcgctgctgttggt
gtaggcataggtgttggtgttgggggaacagcagcaattttccctgggtcagccccaagc
accactgctactccccccaatgccacagctgacatgctggggtcagtgcttgctcagcag
ggccttcagctccaatcccaggtcatgaacaaggccattagtgttcagccatttatgcag
cctgtgggcctgggaaatgtgacgcttcaacccatttcaagtctccaagctcttcctaat
gggagtcagtctggacatttgggtatcggacagattcaggttgtgggtcagcccacagtc
atgactatcaatcagtctgggcagccaatcctggctaaagccatgggtggttaccagctg
caccagtctgggccagaggtatcaggtgctggttctcaggcggggcttggaggctcagga
ggtggacttctgatccaaggtaacaaagccactttgggatctccagctttaaatggaccg
gctgtttgtgtcagcagcacaaacagcagcagtggcggtacaatgacggctcctgctggg
cttgtgggctttggcagcaaccctctaagttcaggaattggagctcagacgcaaactcaa
ggccaaatcatgcagaacgtgatcatccagcgcacaccaacacccattcagcctaaaccc
cctcaggggggagccatccaaacgaaactcttcaaacagcagcagccgcagcagcagcca
cagccagcaccccaacccctgcaaaacgatgcccacaaggctctagggctgcagcaactt
ccagtttctgctgctcagaatgtagccttcctgacaggaaaggcaggctccaatgttgtc
ctgagtactcaagctacaacacaaggcccacagtttcaacagaccctattcaagcaacaa
gcagcacaaccatctggcaagcccctcagtgtacacttgttaaaccaatcaggcagcatc
gttattccccctcagacagttctgcaaggtcaaaatcaccagtttctcctgccacctcta
caggcaggtgggcagatcctgacccagcaccctgggggtcacatcataactagccagggc
cctggtggacagctcattgcgaaccagattttaactgcgaaccagaacatcaacttgggt
caggtgttgacttcacagggccaccctggggctgcccacatcctctctggacccattcag
ctccagcctggccagatgggcacacccaccctctttcagatgcctgtctcattggctcag
agtcaaagccagacacagacccacactgtctcaggtcatacccagacagtcatacagggt
atgccaatccagaactccctaaccatgctgagtcaggtggaggggctgagcccggcagtc
acacttcagccagccctgcaacctcagccaggtggagtccccagcagcagcagcacagga
gcagcaaccatggctcaaagccagcctggagagtgtgttactgtgctgggtagcaccaca
gaccaggctgctcatcccactcagcagcatgtgccgcagtcctctattctcgccatgcaa
ccggcttcctctgtgtccgcagctatcacagtaccctcctcttctccgtccatgtctgtg
tccacctcttcctctgtcacagcagtggggctggtcccccctcaggctcagcacagtcca
gggaggttactgctcaccaaccagggctccagcatgatcttgagccaggagtctctgcag
atgttcctgcaacaggagcagcaccaccaaacagagaatgagtcaaccccctctgtgggc
gtaccagcgtctgtaatcgtcagcagcaacaacatcactgctctggcccccgctgtccat
gacagccaattaactgactcttgggtgggtcagagccacagtccttcccctggcccctcc
cacatgacagcagtggtaaagcaggtacccaccagtggacatcagcagcctctgaagatc
cagggcatgtcaccttcaacagccttgaccactcacaccacagcgcccccagtggcagac
agtccccagccttcccagtctcctctcactctgagccagcagatccagtcaccacaccat
cagcagcagtcacgtcctccctctcagcctcagcctcagtctcaaactccctcccgctcc
tgcacaccctcgtctcaccctccactctttattgtccataaccaaattgcagagtccccc
caaccagctgcacaaggccagccgcagcagacacagctccagcaggcacacattcaagtt
cagcttcagactcagccacggccggcctctcagcctgccccctatcaacaagatatgcct
cccgtgtcacagtcacctaagcctcctcctgcaccgcctgcacagcaccagttcactgca
tctcctgtcagcacttctactacagctgtagtgaaaacccaggttcccatccagggcctg
acagcagagcagcagcaccacctgcaattagtaggagcgcaaattcagaccctgtcaggc
atcacccagccctcacctcagcagaaacagttgctggataagctgcaccaggtccagcag
aacatcctgctccaggccaagcagcctgttcagcctcagcctcaagccaccagtcagttc
agttctcaacaagatgtgcctgttgataaagccgcgattacatcaacagccagcactggt
acacctgctcagcttccctctgtgctgaagccgacgtcagtgcttgtcaaaacccctgct
acagcatcaagtgacttacaggtattctcaggagcccaagggccagctggagcaatggta
aatcagactgtcactcctgccagccttacccagcctgcacaggttcagccaaagccagga
gtgatcagctcagttggagggatgactctggggaaaggtggaatgcagatacaggtgtta
ggagctagtctgactcaaatgcctgctccacagcccccagctccagcacaaactcagaca
ccaacaatgaagatgcctttcagcgcagagcccagcaaagaagccaggatgctagagcag
ctgaggaaacagcagggttcagtgcttcacccaaactacagtgctcctttccactctttt
gaggacacactgcacagactgctgccttaccatctctaccagggaactgccaactcttct
caagactatcaaagagtggatgatgaatttgagagggtctcctgtcagctgctgaaaagg
acccaggccatgctggataaatatcgccacttgctctttgcagagtcaaaacagagactg
ggcccctcggcagagatggtgatgattgaccggatgttcattcaggaggagaagattgcg
ttgaatcaggacaggattttggccaaggagagaccagaggagtttgtagcaaatgcgcgc
atgttggagagtgtggtttcatcccaagagaaatcctcatctgctgagcacacctcagtg
agtggaggtgtagctgctgctgcccctgctccagcatctgctgctcctgccccagcccct
cttccaaacatcaccccaaaccccccacctgcacccgcccaagttccagttccagttcca
gctccagctccagctccagctcctgctccagcccctgcccctgctactgcgcctgctcct
gctcctcctccccctgctcctgctcctgctcctcccgccaccagttctgttacccctttt
cctcctaccaaactggtaataaagcagggtggaggtggagcctctgtgtcttggtccagc
agctgtccaccacctccagccgcagcgggcaagccggtggccgaacccaccagccagtgc
tcctccttcagtcgagctccagcagcatcctcctctttctcgtcctcgtccttcaattct
caagcagccgatgatgacgacgctctcccacagagaaccagcaaaccgcctatcaagacc
tacgaggctcgcaggagaattggcttgaagctgaagatcaagcaggatcaaacggggttc
agtaaggtggttcataacactgcgttagacccagtgcacacacctcaacctcagcagagc
agccagtctatatcccagtctcagactcagcctcagcctcagcctgaagctgctgtacca
catccaaagtcccaccctttatcgactcctcccactacagtcatcagaactcagtccccc
gtatgcacagcttcttctgcctcatcagtcaccatagcaaccactcagtgtaacccgcca
ctgagaagtaatgttcctcccaatgcagccccatcttcctctacctcttcctctcatact
tggtcgtcgtcctcctcctccacctcctccactcaaatgaatgggacgttggatcatcat
ggtatgggtggggtcaaacacaatcctgcctccactgccaatccctcgccgacaacctgt
cgcctcccccttcgaaaaacctaccgggaaaacattagtccccgggtcagacctggtgtc
ccagggggaggagatgaaagtttgtcctaccccagacccacgccgtcaccccccaggcat
gaggcctcatctcctccctcagagcggacagtgatagccagtgtgaaggtggagaaaaga
ggcagggaggcctcgcacactcacacagagtcaagccacgaaacaggccgtttagggagt
gcaatgcaggggctggacgaagtggacgaggtgtttaaccgtggtatcaaaaccacacaa
caccatcatctcccacagctcctagacaaggaaggggcaaaggagagagtggcggagcac
acagaccaagagacagatgtaagtaaatacaagagggcgggtggaaaaaatagacatagg
gtaggtgggactttcagaatggaccagcatgcccctgggcctccctctccagagtcctcc
ttcacacgagactctttacttcctgccaaacgctgcaaatcagattcccccgacatggat
aacgccagcttctccagcggcagccccccggatgactctctcaacgagcaccttcagtgc
gccatcgacagcatcctaaacctgcagcaggagccctctgcccgcgggcaccacattaaa
gggggcaacagcaggccccaccaacaccaaagccagcgcccagggggctcggcagcttca
tcccacagaccctcagtcccacctccctcctctgcttcctcgtcgtcctccttggcccag
caccctcaggtcggtggccgtggccacaatggcagcctggtgccccagactcaaagcaga
taa
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