Seriola dumerili (greater amberjack): 111217001
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Entry
111217001 CDS
T05606
Symbol
uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03010
Ribosome
sdu04120
Ubiquitin mediated proteolysis
sdu04137
Mitophagy - animal
sdu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
111217001 (uba52)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111217001 (uba52)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111217001 (uba52)
04137 Mitophagy - animal
111217001 (uba52)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sdu03011
]
111217001 (uba52)
04121 Ubiquitin system [BR:
sdu04121
]
111217001 (uba52)
Ribosome [BR:
sdu03011
]
Ribosomal proteins
Eukaryotes
Large subunit
111217001 (uba52)
Archaea
111217001 (uba52)
Ubiquitin system [BR:
sdu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
111217001 (uba52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
111217001
NCBI-ProteinID:
XP_022594410
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgttgacggggaagaccatcaccctcgaggttgagcccagc
gacactatcgaaaatgtcaaggctaagattcaggataaggaaggaattccccctgatcag
cagcgtctgatcttcgctggcaaacagctggaggatggacgtacactgtctgattacaac
atccagaaagaatccactctgcatctggttctgcgtctgcgtggtggtatcattgagcct
tcactcagacagctggcccagaaatacaactgcgacaagatgatctgccgcaagtgctat
gcccgtctgcacccacgtgctgtcaactgccgcaagaagaagtgtggacacaccaacaac
cttcgccccaagaagaagctgaagtag
DBGET
integrated database retrieval system
