Seriola dumerili (greater amberjack): 111217069
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Entry
111217069 CDS
T05606
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04270
Vascular smooth muscle contraction
sdu04625
C-type lectin receptor signaling pathway
sdu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111217069
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
111217069
09153 Circulatory system
04270 Vascular smooth muscle contraction
111217069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111217069
Membrane trafficking [BR:
sdu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111217069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
P1_N
Motif
Other DBs
NCBI-GeneID:
111217069
NCBI-ProteinID:
XP_022594487
UniProt:
A0A3B4TYE0
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MSGTQSTLTDRTPSILNKEPTDKKPKNEKSSVSLKHEFDPTGLVQRCVIIQRDENGFGLT
VSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHIEVVKLIKSGSYVALTVL
GRPPGLPQIPLEEDEKEEGAEVSTPSSLSVPHSPALPGGEHCSPQEHLTSPPPDGEENKG
MHSQKIDSLQKMLTKQQLDLQAKEEECGRHPRPKLVKEIQEQKKYISLLQEQISKAIAAI
QDGVTVSRNGEAEQGDGEATSSSRGDGGNDRPSTNNNSMHSSPLPESPGKRETPCQSPDV
SRRDGLNSCSSPDTEDNTDTDSSAQCIVGSPPYLLHPQIIGAEDDYFDSQQEQINGQCSC
FQSIDLLKSRPAHLAVFLHHVVSQFDPVPLLCYLYADMHKQTSSKESRRFFMEFHSLFMD
RTANLKVPVPETIASELEKRRLELIPEELCKQYTQVLQDTLLPDLHKNLEDFRQKRSMGL
TLAEDELSKMDVERGKDQQALEKECSCAEHIISKIEDILLTSQPSEDEKCQTMQYVILTY
MKHLGVKVKEPRGLEHKRARINFLPKIKKSIKPEKEGEEKVKKPRFPNILGPPRRLSRVD
STSVGKAVELNKQRSPKQLSQPAFGILEQSDSSAANSGSRIRGNQLSEGSDSGAQVLPSP
THSSPIGQASDTSGQDSDSNVSPFSIQPRPGEGLPSGDQQDSVFSPTSMQFDFSPSNLEQ
LQEEDQEAFSRMEVQCAATSGDTQSEDDQGGEVECEEDPLNWQSLVSRGVLASLTPQEIK
RQEVINELFYTERAHLRMLKVLDCVFYQRLNRDSILPAEDIKHIFINLEEIIQLHVSITE
QMTATRKRSETSVIGQIGDDLLAWFSGEEEEKIKRAVGTFCCNQPSALELIKTKKKKDQR
FHLFMQEAESNRLCRRLQLKDIIPVEMQRLTKYPLLLDNIAKYTEDGEERQKVKKAGECC
KKILNHVNQAVKEAENKQRLEEYQRRLDLSSLKQSENPMILVLKNLDLTKRKMVHEGPLS
WKVNKDKAIELYTILLEDILVLLQKQDERLILKFHGKNVASAADTKHIFSPIIKLNTVLV
RPVATDNKSFFVLSMSENGAQIYELMAQTVSDQRTWQCLITQRAEAMKAKPHSSGTPPAQ
SDAERDAIEIINRGIPRPCKDANGTSSGDKDATSSPDIQAPLASINPFDGMKSEDEEEEP
AVADRREEEEEDEEVDEAELEAFLDGQLADRLPFLQQEGSRRGIAIENQEHNAFGAASSK
AEDALQTLAMLKQALFNHMMSREAEEEKEETEDNKQSGAPVCQLSASSPGSPEGASAARD
ESRASASSQKDDPQLPPGHTGLSETTERNGGFVVLDFSVGSEESSTDDDVGLGGDMGIDM
RKLLSSSSQTGGGGGPNLSRQLMTHLRLLQADLQYLKEVEMKYNELRQTHTDAAADSDDN
NDGIQ
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtcaacactcactgacaggaccccaagcattctcaacaaggagccg
acagacaagaaacctaagaatgagaaatcgtccgtctccctcaaacatgaatttgatcca
acaggtctcgtccagcgttgcgtgataatccagagagatgaaaatggcttcgggctgacc
gtaagcggagacaaccctgtgtttgtgcagctggtcaaagaagatggagctgcgatgcga
gctggtgttcagacaggagacaggatcatcaaggttaatgggaccttagttacacattca
aaccacatagaggttgtgaagctgataaaatcgggctcctatgtagccctgacagtcctg
gggaggcctccagggcttcctcagatccccctggaggaggatgagaaggaggaaggggca
gaggtcagcacaccctcgtctctctcagtgcctcactcgcctgcgctgccaggtggggag
cactgcagcccccaggagcacctcacctcccctccgcccgatggggaggagaacaaaggc
atgcacagccagaagatcgacagcctccaaaagatgttaaccaaacagcagctggactta
caggcaaaggaggaggagtgcggcagacacccacgacctaagctagtgaaggagatccag
gagcaaaagaagtacatttcactgctgcaggagcagatcagcaaagcaatagcagcaata
caggatggagtcactgtgtccaggaacggtgaggccgagcagggggacggcgaagcgacc
tcgtcctcgcggggtgacggcggtaacgacaggccctcgactaacaacaactctatgcac
agcagccccctcccagagagtcccggcaaaagagagacgccctgtcagagcccggacgtc
agccgccgagacggactcaactcctgctcgtcgcccgacactgaggacaacactgacact
gactccagcgcccagtgcattgtgggtagccctccctacctcctccacccccagatcatt
ggagcggaggatgactactttgactcccagcaggagcagattaatggacagtgcagctgt
ttccagagtatagacctgctgaagtctcggccggctcacctcgcagttttcctccatcat
gtcgtctcgcagtttgaccctgtgcctctgctgtgttacctctacgccgacatgcacaaa
caaaccagctccaaagaaagccgacgcttcttcatggaattccactcactcttcatggat
cgaacagccaatctcaaagtaccggtgccagagacaattgcgtctgaactggagaagcgg
aggctggagttaatcccggaggagctgtgcaaacagtacacccaggtgttacaggacaca
ctcctacctgacctgcacaagaacctggaggacttcagacagaagcgcagcatgggtctg
actctggctgaggacgagctgtccaagatggacgtggagcgagggaaagaccagcaggcc
ttggagaaggagtgctcctgtgccgaacacatcatctccaagatagaggacatcctgttg
acgtcacagccctcagaagacgagaagtgccaaacgatgcagtacgtgatcctcacctac
atgaagcacctcggggtgaaagtgaaggagcctcgcggcctcgaacacaaacgagcgcga
atcaatttcctgcccaagattaagaagagcatcaagcctgagaaggagggtgaggagaag
gtgaaaaagcctcggtttcccaacatcctcggcccgccaaggcgcctgagcagagtggat
tcaacttcagtcggtaaggccgtggagctgaacaagcagcggtctccaaagcagctctcc
cagccggccttcggtatcctggagcagtctgactcctctgcagcgaattctggatcacgg
atccgtggaaatcagctcagcgagggatcggactctggtgcccaagttttgccttccccg
acacacagctcccccattggtcaggcctcagatactagcggacaagactcagactccaat
gtgtctccgttctccattcagcccagaccgggcgagggtctgccgtccggcgaccagcag
gacagcgtcttcagtccgaccagcatgcagtttgacttcagcccctccaacctggagcag
ttacaggaggaggatcaggaggcgttcagcaggatggaggttcagtgtgcggcgacttcg
ggcgacacccagagtgaagacgaccagggaggtgaggtggagtgtgaggaggatcctctg
aactggcagagtctggtcagccgaggcgtcctggcaagcctcacgccgcaggagatcaaa
cggcaggaagtcatcaacgagctgttctacactgagcgcgcccacttacggatgctgaag
gtgctggactgtgtcttctaccagaggctgaacagagacagtatcctccccgcagaggac
atcaaacacatctttatcaacctggaggaaatcattcagctgcatgtttctataacggag
caaatgacagcaaccaggaagaggagcgagacatcggtgatcggtcagattggagatgat
ctcctggcgtggttcagcggggaggaagaggagaagataaaaagagcagtgggaactttc
tgttgcaaccaaccgtctgcgctggagctcatcaagaccaagaagaagaaagaccagagg
ttccacttattcatgcaggaagctgagagcaaccgtctgtgtcgcaggctgcagctcaaa
gacatcattcctgtagagatgcagagactgaccaaatacccactgctactggacaacatt
gctaagtacacagaggatggtgaggagaggcaaaaggtgaagaaagctggcgaatgctgc
aaaaagatcctcaaccacgtcaaccaggccgtgaaagaggcagagaacaaacagagactg
gaagagtaccagagaaggttagatctctcgtctctcaaacagagcgagaaccccatgatc
ctggtcctgaagaatctggacctgaccaagaggaagatggttcatgagggacctctctcc
tggaaagtcaataaagacaaggcgatcgagctgtacacaattctcctggaggacattctg
gttttactgcagaagcaggacgagcgtctgatcctcaagttccacggcaagaatgtggcg
agcgccgccgacaccaagcacatcttcagccccatcatcaaactcaacactgtactggtt
cgtcccgtggcgactgacaacaagtctttcttcgtgctgtccatgtcggaaaacggggct
cagatctacgagctgatggctcagacggtgtccgatcagagaacgtggcagtgtctgatc
acacaacgcgccgaggccatgaaggccaaacctcacagcagcggcacgcctccagctcag
tctgatgctgagcgggacgctatagagatcatcaaccgtgggatacccaggccgtgcaaa
gacgctaacgggacatcgagtggagataaagatgccacctcttctccagacattcaagct
ccgctggcgagtatcaaccccttcgatggcatgaaatcagaggacgaggaagaggagccg
gctgtggccgaccgacgggaggaagaggaggaggatgaagaggtggacgaagcagaacta
gaggccttcctggatgggcagctcgcggacagactgcccttcctgcagcaggaagggtca
cgtcggggcatcgccattgaaaaccaagagcacaacgcgttcggcgcagcctcctccaaa
gctgaggacgctctgcagacattggcgatgctcaaacaggctcttttcaaccacatgatg
agcagagaggcagaggaggagaaagaggagacagaggacaacaagcagagcggggcccct
gtgtgtcagctgagtgcctcctcgcctgggagccctgagggggcttctgctgcacgcgat
gagagccgagcgtctgcgagttcacagaaagacgacccgcagctccctcctggacacaca
ggcctgtccgagacgactgaacgcaacggtggttttgtggttctggatttcagcgtgggc
tccgaggagagcagcactgatgatgatgtggggttagggggtgacatggggatcgacatg
aggaaactgctgtcctcctcctcgcagacagggggcggcggcggccccaacctcagccgg
cagcttatgacccacctgcggctcctccaggccgacctgcagtatctgaaggaggtggaa
atgaagtacaacgagctgcgacaaacacacaccgacgcggccgccgactccgacgacaac
aacgatgggattcagtga
DBGET
integrated database retrieval system
