Seriola dumerili (greater amberjack): 111217096 Help Entry 111217096         CDS       T05606                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism sdu  Seriola dumerili (greater amberjack) Pathway sdu03440   Homologous recombination sdu03450   Non-homologous end-joining sdu04218   Cellular senescence Brite KEGG Orthology (KO) [BR:sdu00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     111217096 (rad50)    03450 Non-homologous end-joining     111217096 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     111217096 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:sdu03032]     111217096 (rad50)    03400 DNA repair and recombination proteins [BR:sdu03400]     111217096 (rad50) DNA replication proteins [BR:sdu03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     111217096 (rad50) DNA repair and recombination proteins [BR:sdu03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      111217096 (rad50)     BRCA1-C complex      111217096 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      111217096 (rad50) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 SMC_N SbcC_Walker_B zf-met TolA_bind_tri AAA_29 AAA_22 AAA_13 AAA_16 Motif Other DBs NCBI-GeneID:  111217096 NCBI-ProteinID:  XP_022594529 LinkDB All DBs Position Unknown AA seq 1312 aa AA seqDB search MSKIDKMSILGVRSFGIEDKDKQVITFFSPLTVLVGPNGAGKTTIIECLKYATAGELPPG SKGGAFVHDPKDAHETDVRAQICLLFTDVNGEQVTIHRSMSCTQKAKSYSFKSLEQVITR KKDGEKVSLSSKCGELDREMISALGVSKSVLNHVIFCHQEESNWPLSEGKALKDKFDSIF AATKYIKALETMRQQRLAQNNTVKQCQVELRYLKQNKEKAQQIRDTVATKEAQLMASKDS IQQIESQIDPLENRLMDIDTKLGKVMKLDNDIKALESRKKQMEEDNRELEETMEQVFQGS DEQLQDIYQNHQRTVREKERRLTDCQKEVERAGRECQKLNRVKADLLVEQGRLQLEADRH TQNIKNRDTQVRSLSSYLEMEGYDRPPFTTLQLESFHRHVTQRLEQEKEAVSQVLADLQE KEQQKQQSIDEMRDKKTGLERTVELKRDLQGKKQQEMRNVRAELQRLEGSSTRLQELEKE LAKAERELQSAVQSSNVEELKAEVVELQREKAELDRAQRQLDQEMEMLNTHTTARTQMEM LNKDKTEKEDQVRKIKSRHSEDLVSLLGHFPNKRELEDWIYAKSKEINGTRDRLAKLNKD LASSEQNKSHISAELRKKEQQLASDEEKFFNVCGSQDLEQDLGKLGEDLEKISKQRAMLA GATAVYTQFISQLTEEREPCCPVCQRTFPSESDLQEVISDMQSKLRLVPDKLKNTEGDLK RKERKRDEMMALRPVRKSIVQFQEKELPELKNRLQTVNREIERLKGDVEEQETLLCTLMS EEETAKACLQDISLMDRYLMDLKEVERKIAQQAAKLQGVDLTRTIQQVSQEKQETQHKLD TTSSKMELKRKLIQDQQDQIQMLKSAVNETRAEKLQLSSDMQKQQQLEEQCVEFTTEIQT LTRDIRDAKEQLSPLSAALEKLQQEKQELVDRRRQRQEEGQEKVSSIKERVKALTTLERD ITKYVDEGKNEYKEQKESELQETNTQLHEAEKQKEKITKEMGNIRQDIDTQKVQERWLQD NLTLRKRVEELKEVVAKREALMKDIGNMQVLQLRQERREAERKLEDLKKNRSIALGRQKG FEEEILHYRKELREDQYDKADERYKNKMIIMRTTELVIKDLDLYYKALDQTIMKFHSMKM DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSAGVKRRVYNYRVVMVKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIINSRSRQR NFQLLIITHDEDFVELLGRSSYIEHFYRIRKNRDQNSEIIKCSITSLSSYLH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcgaagatagacaagatgagcatcctgggcgtgaggagctttgggattgaggataaa gacaaacaagtcataactttcttttctcctctgactgtgctggttggacccaatggagca gggaagacgactattattgagtgccttaagtatgcaacagcaggagaacttccccctgga tctaaagggggtgcctttgttcatgatccaaaggacgcccatgagacagatgtgcgagca cagatttgcctcttattcacagacgttaatggagagcaagtgaccatccatcgctccatg tcatgcactcagaaggcaaagagctactccttcaaaagcttagagcaggtcatcaccaga aaaaaagacggtgagaaggtgagcttgtcatctaagtgtggtgaactggaccgggagatg atttctgccttgggtgtatcgaagtctgtgctgaatcacgtcatcttctgtcaccaagaa gagtctaactggccactgagtgagggcaaggctctcaaagacaagtttgactccatcttc gctgcaaccaagtatatcaaagctctggagacgatgcgccagcagcgtctcgcacagaac aacacagtcaaacagtgtcaggtggagctgcgctacctgaagcagaacaaggagaaggcc cagcagattagagacaccgtggccaccaaggaggctcagctgatggcgtctaaggacagc atccaacagatagagagccagattgatccacttgagaatcgactgatggatattgataca aaacttgggaaagtgatgaaactggacaatgacatcaaggctttagagagcaggaaaaaa caaatggaggaggacaacagggagctggaggaaacaatggaacaggtgtttcagggttca gatgagcagctgcaggacatttatcagaaccaccagaggacagtgagggagaaggagcgg aggctgacagactgccagaaggaggtggagagagctggccgcgagtgtcagaaactgaac agagtcaaggctgatctgctggtagaacaaggtcgtcttcagctggaggccgaccgccac acccaaaacatcaagaatcgtgacactcaggttcgctctttgtcttcctacctggaaatg gagggttatgaccgaccgccgttcaccactcttcagcttgagagttttcaccgtcacgtc actcagagactggagcaggaaaaagaggcagtcagtcaggttttggcggacctgcaggaa aaagagcagcagaagcagcagtccattgatgaaatgagggataagaagaccggcctggag agaacagtggagctgaagagagacctgcagggaaagaagcagcaagaaatgaggaacgtc agagcagagctgcagaggctggaggggtcgtcgactcgactgcaagaactggagaaagaa ttggccaaagcggagcgcgagctgcagagcgcagtgcagagctccaacgtggaggagctg aaggccgaggtcgtggagctccagagggaaaaggccgaacttgaccgcgcacagagacag ctcgaccaagaaatggagatgctcaacacacacacgaccgcacgcacacaaatggagatg ctgaataaagacaagacagaaaaggaggaccaggtacgtaagatcaaatctcgtcacagc gaggatctggtgtcattactgggccactttcccaacaagagagagctggaagactggatc tacgccaagtctaaggaaatcaacggtaccagggacagacttgccaaactcaataaggac ctggcatcaagtgagcagaataaaagccatatttctgctgagctgcgtaagaaggagcag cagttagccagtgacgaagagaagttcttcaatgtgtgtggcagtcaggatctggagcag gacctgggcaaactgggggaagatctggagaagatatctaaacaaagagccatgctagca ggagccacagcagtgtacacccagttcatcagccagctgacagaggagagggagccctgc tgccctgtctgccagcggacgttcccctcagagtctgatctgcaggaggtcatcagcgac atgcagtccaaactgcgcctggtgcccgacaagctgaaaaacactgagggggacctgaag aggaaggagaggaagagagatgagatgatggctctcagacctgtcaggaagtccattgta cagtttcaggaaaaggagttgcctgagttgaaaaaccgtctgcagactgtgaacagagaa atcgagaggctgaagggagacgtggaggagcaggagactctgctctgtaccctgatgtca gaggaggaaacagccaaggcctgcctgcaggacatctctctcatggacagatacctgatg gaccttaaagaagtggagaggaaaatagctcaacaggcagccaaactccagggagtagac ctgaccagaaccatccagcaagtcagtcaggagaaacaagaaacacagcacaagctagac accacctccagcaagatggagctgaaacgtaagctgatccaggaccagcaggatcagatt cagatgctgaaaagtgctgtgaatgagacgagagcggagaagctccagctgagcagtgac atgcagaaacagcagcagctggaagagcagtgtgtcgagttcaccaccgagattcagaca ttaaccagggacatcagggacgcaaaggagcagctgtcccctttgtctgctgctctggag aagctgcagcaggagaagcaggagctggtggatcgccggaggcagaggcaggaagaaggg caggagaaggtcagttccattaaagagagagtgaaggcgctcaccaccttggagagagac atcaccaaatacgttgacgagggcaaaaatgaatacaaagagcaaaaagagtctgagctt caagaaaccaacactcagctgcatgaggctgagaagcaaaaagagaagatcaccaaggag atgggaaacatccgtcaggacatagacactcaaaaggtccaggagcgctggttgcaggac aacctgaccttgaggaagcgtgtggaggagttgaaggaggttgtggctaaacgcgaggct cttatgaaagacattggcaacatgcaagtcttgcagttacgccaagaacgacgtgaagca gaacgcaagctggaagacttgaagaagaaccgcagtatagcactgggtcgtcagaaaggc tttgaagaggagatactgcattacagaaaagagctgcgagaagatcagtacgacaaagct gatgagcgctacaaaaacaagatgatcataatgagaaccacagagctggtaattaaagac ctggatctctactacaaggcccttgatcaaacaatcatgaaattccacagtatgaagatg gatgagatcaacaagattatcagagacctatggcgtagcacctacaggggtcaagatatt gaatatgtggagatcaggtctgatgtggatgagaactcgtctgctggggtgaagcggagg gtttacaactacagagtagttatggtgaaaggagacacagctttggacatgagaggacgc tgcagtgccggtcaaaaggtgttggcatccctgatcatccgcctagctctggcagagacc ttctgtttaaattgtgggatcctggccctggatgagcccaccaccaacctcgaccgggag aacattgagtcactggcacacgccctcgtcgaaatcattaatagtcgctctcgccagcgc aacttccagcttctgatcatcacccacgacgaggatttcgtggagctgctggggcggtcc agctacatcgaacacttctaccgtatccgtaagaaccgggaccagaattccgaaatcata aagtgtagcatcacttccctctcatcctatctccactga

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