Seriola dumerili (greater amberjack): 111217125
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Entry
111217125 CDS
T05606
Name
(RefSeq) remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111217125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111217125
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
111217125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
111217125
NCBI-ProteinID:
XP_022594574
LinkDB
All DBs
Position
Unknown
AA seq
1765 aa
AA seq
DB search
MAASAATASSSPGLCPNYAVICSFLERYGALLDLPELTFPQLERYLQDTSSVPKLLVDLH
VKLLRKIGKSVSADRWEKYLVKVCQEFNTTWAWELEEKGYKEMPLESKTGILKYLCESQF
DENVKFKTAINEEDPDKMRLQPIGRDKDGQMYWFQLDQDDNVRVYVEEQDDLDESTWKCI
VRDRNDLAEVVALLKTQIDPALLKKDEEQKQQTKPDSEDDEDKSEDSKDSNKAARPVSPK
TENSEKVTQKDNLKPEASEAKSSLNGIVEGRAEAELHSENVSAKAQNIKEEPVEVSDTKT
STATSEAAPETPCLSVKAEKGEEAKRSSAEEIQQALKNDQQAKIPLKKRGMKFSEDFEKN
SAIIVQIPSVSQVKDAPKADATPDQTKKAQSVNDHVNGEIKPASEKDVQSQLSESLKDAA
VDKEKETEAAAGKSVEVRENDSPSTDKEGAKDKKDEACSAQKIKEAVASQQTDSDKKDPA
LQVEKESTAATEKKEAHESPPPPKAESPPLPKDVNNALEKSSNHEKSEGVKEKPANTEES
CTVDEKTALKEPDKTLTTDDSDNLNLNHEVTSKEAESKDAGGKPACVDMDTSEPSQAEET
KTAERTEAVTDMKKTEVSDKAAKETETSDTNVEKSDDSAPKKKPDVIKTTEAQPAGEGPP
EKSDDSENTVSPSVIKKTEMVKDGDDTETQDVSQTSTVIKKADRPSVSEKSEETPDVKES
AASSVVEKVDKPESCKPAEKPDNRKDTEVTPEKTSAASEKPEKPEKMEKPEKTEKTEKTE
KPEKMEKPQDTKKSVNCEDSTIRDVTKISDLTSGPTEAEAEAVKQDLTKPQEDDKTEMNS
VEHKTTEEASEGKDKSSSPAEKTKASEETGKKSDKKEEKVSDKQPEQIEEERPSSESKKD
ADKGGEKDKDDEKLAKDSEKHLSQDKESKEDSTVDKPSKTDRAKKEKHARRESEASTKKE
KSGSQNASKDADAEPQAETEKPVRPSKEPSADKPSDKESKSKNEEEESATKKEVANGGGA
PAGAQVEGVRRRVKPPAHRRKAELHREERQADSESDTNTGRSLRRSPRISRPTPKAVEIH
DRKMEKSQAAPAAEKREDNKAEKEKDEEDEEEEEEEVVKVVQKKPREKKADQEGQTKPKG
RKRRKVRWSNTRTRRKKKGSEDEEDNSDEESSDEEESEDEDDSDEDYKVERSRKRRNRNR
ERRSSDSSTSSDDDLPPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGE
WFCPPCQHKQLCDKLEEQLQNLDAALKKKERAERRKERLIYVGISVENIITPSVEVEEEK
PEIIIKEKKETKRSKSWGRRSTRAKKTISYRFDEFDEAIEEAIEEDIKEAEGGGAGRGKD
MANITGHRGKDMSAILQAGEEGKENGRPPRPSAGQRKKKRRRLNDLDSDSTVDEEESEEE
FRLSESSEEEFVVSENESEGESEADSNDSDFGSNGSGKHRTSSRSKKPPKRRRSSRKRRR
PRGYSDDEEEESDEEDEEDEIVTEGSSEFSDSDLDVSRRRSRRSQKKKVNYCETSESDGS
QAETNRAKMKPRRRQDSSESEASFSRDSDEESRDQRVKRRADSSEEDSRQRRRRLALKRR
RASEDDDSDDDSDDSSEEDRPIRKRVNRIDSDDDDEEEEEKPKEKKAEEESKGTNPLDSN
VVEVPPSNGQSPIKSLEGFISRPAAPAAPGLIPNMEPPKNISATPAAAIAPNGLVGQEMA
TQEDDEDDLLGVTDLVDYVCNNEQL
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcggcggcaacggcgagttcttcccccggtttgtgtccgaattacgccgtc
atttgctccttcctcgagcggtacggagcgttgctggacttaccggagctcacttttcct
cagctggagagatatctgcaggacacatcctcagtcccgaagctgctggttgatcttcac
gtcaagctgctgaggaagatcggcaagtcggtgtcagcagacagatgggagaagtatcta
gtcaaggtgtgtcaggagttcaacacaacatgggcatgggaactcgaagaaaaaggatac
aaggagatgccgttggagtccaagacggggatacttaaatatttgtgcgagagtcagttt
gatgaaaatgtgaagtttaaaaccgccatcaatgaggaggacccggataagatgcgtctg
cagccaattgggcgagacaaagacgggcagatgtactggtttcaactggaccaagacgac
aacgtgcgcgtttatgtggaggagcaggacgacctggacgagtcgacgtggaaatgcatc
gtcagagatagaaacgacttggctgaggttgtggctctgctcaagacacaaatcgaccct
gcgctgttgaaaaaggacgaagagcaaaaacaacaaaccaaacccgacagtgaagacgat
gaagacaaatcagaagacagcaaagactccaacaaggctgcccgcccagtctcaccaaag
acagaaaacagtgagaaagtaacacagaaagataacttgaaaccagaagcgtctgaggcc
aaatcgtccctgaatggcatcgtcgaaggcagagctgaagcggagctccattcagaaaac
gtcagcgcaaaagcccagaacatcaaagaagagccagtggaggtgtcggacactaaaaca
agcacagcaacaagtgaagccgcccctgaaacaccgtgtttatcagtaaaggcagaaaag
ggagaggaggccaagaggagcagtgcggaggagatccagcaggctctgaagaacgaccag
caggctaaaatccctttgaaaaaaagaggaatgaagtttagtgaagactttgaaaaaaac
agtgctatcatagtacaaatcccatctgtttctcaggtcaaggacgctcctaaagcggac
gcgactcctgatcagacaaagaaagcacagagcgtaaatgatcatgttaacggtgaaatt
aaacctgcgtcagagaaagatgtccagagtcaattgagcgagtcactaaaagacgccgcc
gtcgacaaagagaaggagaccgaagcagccgcaggtaaatctgtagaagtgagagaaaac
gactccccgtccacagacaaggagggcgcgaaagataagaaagacgaagcctgcagtgca
cagaagatcaaagaggcggtcgcgtcacaacaaacggactcggataagaaagatccagcg
ttgcaggtagaaaaggaaagcaccgcagcaacagagaagaaggaagcacacgagtctccc
ccgccaccgaaagcagagtcgccacctttacctaaagatgtaaataatgcacttgagaag
tcttctaatcatgaaaagtctgaaggagtcaaagagaaaccagccaatacagaagagtct
tgtactgtcgacgagaagaccgcattaaaggaacctgataaaacattaacaacggatgac
tcagacaacctaaatttaaatcatgaagtcacatccaaagaggctgaatcaaaagatgca
gggggaaaaccagcctgtgtagacatggacacatcagagcccagtcaggctgaagaaact
aagacggcagagaggacagaggctgtaacagacatgaagaaaacagaagttagtgataaa
gctgctaaagaaacggaaacatctgatactaatgtagaaaaatctgatgactcggcaccg
aaaaagaagccagacgtcattaaaacaacagaggcgcagcctgctggcgagggtccccca
gagaaatctgatgactctgaaaacactgtatcgccatctgtgattaaaaagacagagatg
gtaaaagacggcgacgatacagagactcaagatgtcagtcaaacatctactgtcattaaa
aaagccgacaggccgtcagtcagtgagaaatcagaggaaacacccgacgtcaaggagagt
gcggcgtcttcagttgttgaaaaggtagataaacccgaatcgtgtaaacctgccgagaag
cccgataacagaaaagacacagaggtgactccagagaaaacaagcgcagcctcagagaaa
cctgaaaagcctgaaaagatggaaaagcctgaaaaaacagaaaagacggaaaaaacggaa
aagcctgaaaagatggaaaagcctcaggatacaaagaaaagtgtcaactgtgaagacagt
acgatacgtgatgttaccaagataagcgacttaacgtcagggccaaccgaggcagaggca
gaggccgttaaacaggatctgacaaagccacaagaggatgacaaaactgagatgaactct
gtcgaacataagacgacagaggaagcatctgaagggaaagataaatcatccagtccagct
gagaagacgaaagcctccgaagaaactggtaaaaaatctgataaaaaagaggaaaaggtg
tctgacaaacagcccgaacaaatcgaggaagagcgtccatcatcagaaagtaaaaaggat
gctgacaagggaggtgaaaaagataaagacgatgagaaacttgcaaaggacagtgagaaa
cacctgagtcaagacaaagaaagtaaagaggattctacggtagataaaccctcaaaaact
gatagagcaaagaaggagaaacatgctcgtagagagagcgaagcctcgaccaaaaaggag
aaatccggctcccaaaacgcgagcaaagacgctgacgccgaaccccaggcggaaaccgaa
aaaccggtccgccccagcaaagaaccgtccgctgataaaccctctgacaaggaaagcaaa
agcaaaaatgaagaagaggagtctgcgacaaaaaaagaggtggcaaacggtggcggagct
ccggcaggcgctcaggtggagggtgttcgtcggagagtcaagcccccggcccaccgaagg
aaagctgagcttcatagagaggagaggcaggcggattcagagtccgacacgaacacgggg
agatctcttcggagatcgccgaggatctctagaccgacgccaaaggccgtggagatccac
gacaggaagatggagaaatcgcaggccgctccggcggctgagaaacgcgaggacaacaaa
gccgagaaggaaaaagacgaggaggacgaggaggaggaggaggaggaggtggtgaaggtt
gtacagaagaaaccaagagagaaaaaggcggatcaggagggtcaaaccaaacctaagggg
agaaagagacggaaggtccggtggtccaacactcgaacgcgccgtaaaaagaaaggctct
gaagatgaggaagacaacagcgacgaggagtccagcgacgaggaggagagtgaggatgag
gacgacagcgacgaagactacaaggtcgagcggagcagaaagaggcggaaccggaaccga
gaaaggcggagctcagactcctcgacatcctcagacgacgacctacctcccaacgacgac
ccttgcaaacattgtggtcttccaaatcaccccgagctgatcttactttgtgactcgtgt
gacagcggctaccacacagcttgtctgaggcctccactcatgatcatccccgacggagag
tggttctgtccaccgtgtcaacataagcagctctgcgacaaactagaagagcagctgcaa
aacctcgacgctgctttgaagaagaaggaacgggctgagaggaggaaagagcgtcttatt
tatgtcggaatcagtgttgaaaacatcatcacgccctcggtggaggtagaggaggaaaag
ccagagatcataatcaaagagaagaaagaaacaaaacgaagtaagagctggggtcgaagg
tcaacgagggcgaagaaaaccatcagctacagatttgatgaatttgatgaggcgatcgag
gaggcgattgaagaagacatcaaagaagcagagggcggaggagcaggtcggggtaaagac
atggccaacatcacaggccacagagggaaggatatgtccgccatccttcaagcaggggag
gagggtaaggagaacggccgcccgccacgacccagcgctggtcagcgcaagaagaagcgc
cggcgactcaatgacctggacagcgacagcacggtggacgaggaggagagcgaggaggag
tttcgcctcagtgaaagctcagaagaagagtttgtagtgtcggagaacgaatcggagggt
gaatcggaggcggactccaacgacagcgacttcggcagcaacggcagcgggaagcatcgt
acatcttcgcggagcaagaagccaccgaagcggcgacgaagctcccggaagcggcggaga
ccaagagggtactcggacgatgaagaagaagagtcagacgaggaggatgaagaagatgaa
atagtgactgaaggctccagtgagttcagcgacagtgatcttgacgtgagtcgacggcgg
tctcggcggagtcagaagaagaaggtgaactactgtgagacgtcggagtctgacggatct
caggcagaaaccaaccgggcaaaaatgaaacccagacgtcgccaggacagctcagaaagc
gaggcgagtttctctagagactctgacgaggagtcgagggatcagagggtgaagaggaga
gccgactcctcagaggaagactcgcggcagcgacgcagacgtcttgcactaaaacgcagg
agagcgtccgaggacgacgactcggacgatgactcggacgactcgtcggaggaggatcgt
cccatccgaaagcgggtgaaccgcatcgactcggacgatgacgacgaggaagaggaggag
aaaccaaaggagaagaaagcagaggaggagtcaaagggaacaaatccattggacagcaat
gtggtggaggtgccacctagcaacggacagagcccaataaagagcctggagggcttcatc
agccggcctgctgcccctgccgctccaggcctcatcccaaatatggagccgcccaaaaac
atcagcgccacaccagccgccgccattgcaccaaacggtctggttggccaggagatggcg
acgcaggaggatgacgaagacgacctgttaggagtcacagacctagtggactacgtctgc
aataatgaacaattgtaa
DBGET
integrated database retrieval system
