Seriola dumerili (greater amberjack): 111217136
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Entry
111217136 CDS
T05606
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111217136 (supt6h)
03036 Chromosome and associated proteins [BR:
sdu03036
]
111217136 (supt6h)
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111217136 (supt6h)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111217136 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
S1_RRP5
HHH_3
HHH_9
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
111217136
NCBI-ProteinID:
XP_022594592
LinkDB
All DBs
Position
Unknown
AA seq
1747 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFMQEDDEEEEEENTEDQDEQGNLRGLIDDGDE
EGEEEEEEREKSASGGGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKY
DRVKTLDDDEEDDDEKDLIADEIFHGDGEGELEEGEAVDEPLHHADDDEEGEDEESDIDD
FIVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDEE
GWDRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAED
DELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQF
EVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSYQFEQISAD
PDKPLADGIRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKANKKRLKK
IKEVSEDGEEEELEVEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGEN
LRDSYQRHETEQFPAEPVELAKDYVCSQFSTPEAVLEGTRYMVAMQIAREPLVRHVLRQT
FQERAKINIKPTKKGKKEIDEAHFAYSFKYLKNKPVKELNGDQFLKMCLAEDEGLLSIDI
CIDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYPQMAKEL
KSKLIAEAKESIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDENQGKGIRVLGVAYAPS
RDTPVFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKANDIENLKKFLSSKKPHVVA
VAGENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSEVDYRDYPPL
LRQAVSIARKIQDPLVEYAQVCSTDEDILCLKLHPLQEHVVKEDLLSALYCEFINRVNEV
GVDVNRAIAHPHTQSMVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFI
NCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGAL
EEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEV
FNLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPEL
SEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMK
IDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQEEEFKKKQQRTPYIKRV
IAHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKE
NAFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQECNGGNKEKMEELLVR
TKREKPTFIPYFISACKDLPGKFILGYQPRGKPRVEYVTITPDGFRYRSQIFPTVNGLFR
WFKDHYQEPVPGITPSNSSRTRTPASLNATPANINCLDLTRAVNALPRNMTSQMFSAIAA
VTGQGQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTP
SQQALGTPQYPGSTPQSSHSHAHAHPHVSHHGHHGHHSSHHGHSSGTPSSSTSSRGRTPQ
QQPKASGSNASAVDWGKMAEQWLKEKEAEGRKKAQRMTPRPSPSPMIESTPMSIAGDATP
LLDEMDR
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcattgagagcgaggcagaggagtcagaagaggagtttgaagagaaagac
ctaaagcctaaaaagacccagaggtttatgcaggaagatgatgaagaggaagaagaggag
aacacagaggaccaggatgagcaaggaaatctacgcggactcattgatgatggagatgag
gagggggaagaggaggaagaagaacgtgaaaaaagtgcaagtggaggggggagtgactca
gaggaagaagtgaggcatcgacgtaaaaagcgaaattatgacgactacctagatgacgat
gatctcgaccttattgaggaaaacttgggtgttaaagtgaaaaggaggaagaagaaatat
gaccgtgtaaaaacactggatgatgatgaagaagatgatgatgagaaggacttaatcgca
gatgagatctttcatggggacggagagggtgagctggaggaaggagaggctgtggatgaa
cctctccatcacgcagatgacgacgaagaaggagaggacgaggagtcagatattgacgat
tttattgtggatgatgatggccaacccatcacgaaaaagaggggcaagaagttctcaggc
tacacagacgcagccctgcaggaggcccaggagattttcggtggcgacttcgactttgct
gactttgacgcggatgcttacgaccagggtgaggaggaggaagaggaccaggatgaggag
ggctgggacagacccaaaaaacagaccaagaggaggcaggggaggaagagcatctttgag
atctacgagcccagtgagctggaaagcagtcacatgaccgaccaggacaatgagatccgc
tctacagacatgcctgagaggttccagttacgatccatcccagttaaacccgctgaggat
gatgagctggaggaggaagccgagtggatcttcagacatggcttctccactcttaccata
tccatgcaggagagcacagattatctagacaggggaacgaccacaaacttcagcaggaaa
ggccccagcacgattgccaagatcaaagaggccctcaacttcatgaggaatcaacagttt
gaggttccgttcatagctttttacaggaaagaatatgtcgaaccagagttaaacataaat
gacctgtggaaggtgtggcagtgggatgaaaagtggactcaactgaagacccggaagcag
aacctgacccgtctgtttcagaagatgcagtcctaccagtttgagcagatctctgctgat
cctgacaaaccgttggctgacggcatccgtcctctagacactgctgatatggagaggctg
aaagatgtgcagactcttgaagagctgggagatgtgtacaaccactttctgctctactat
ggccgagacatccccaagatgcagaatgctgccaaggccaacaagaagaggctcaagaag
atcaaagaggtgtcagaggatggtgaagaagaggaactggaggtagaagaagaagaagaa
cagaaaggacctgacctcaagctggcatctcgtagggatatgtacagcatctgtcagagc
gtcggacttgatggcttggctaaaaagtttgggttaactccggagcagtttggagaaaat
ctgagagacagttaccagcgtcacgagacagagcaattccctgctgagcctgtggaactg
gccaaagattatgtttgcagtcagttcagcactcctgaggcagtgctggaaggaaccagg
tacatggtggccatgcagattgctcgggaaccgctggtcagacatgttctccgacagacc
tttcaggagagagcgaagatcaacatcaaacccacaaagaagggcaaaaaggagatcgac
gaggctcattttgcctactcattcaagtatcttaaaaacaagcctgtaaaagagctgaat
ggggatcagttcttgaagatgtgcctggcagaagacgaggggctgctttctattgacatc
tgtatagatcttataggggtcaaagggtatgctggggaccagacatactttgatgagatc
aaacagttctactacagggatgagttcagtcaccaggtgcaggagtggaacaggcagcga
actttagccatagagagagctctcaatcagttcctctacccgcagatggccaaggagctc
aagagcaaactgatcgctgaggccaaagagagcattgtcaggtcctgctgtcgccggttg
tataactggctcaaggtggctccttacaggccagatcagcaggttgaggaagacgatgat
ctgatggatgagaatcagggcaaaggcattcgggtactgggtgtagcctatgcacccagc
agagatacaccagttttctgtgctctgattaacggggaaggagaggtggtggacttcctg
cgtctgccctactttatgaagaggaggaatgccttcagggaggatgagagagagaagaag
gccaacgacatcgaaaatcttaagaagtttctgtcaagcaagaaacctcatgtggtagct
gttgctggagaaaaccgagatgcccaaatgatcatggaggacatcaagaggactatcagc
gagcttgaacaagagtcctctctgcctgctgtaggagtggaacttgttgacaatgaattg
gccacgttgtatatgaacagcaagaaatctgaggttgactatagggattaccctcccttg
ttgcgacaggctgtgtcgatagctaggaagatccaggatcccctggtggagtacgctcag
gtctgcagcactgacgaggatattctctgcctcaaactacacccgctacaggaacatgtg
gtaaaggaggatttgctctcagcgctttactgtgaattcatcaaccgtgtcaatgaggtc
ggagtagacgtgaatagggccatcgcccatcctcacactcagagcatggtccaatatgtc
tgcggtttgggaccaaggaagggctcccacttgctcaagattctgaagcagaacaacact
cgtctggaaaacagaacccagctggtcactatgtgtcacatgggacccaaggttttcatc
aactgtgctggtttcatcaagatcgacactgcatcacttggagacagtacggattcctac
attgaggtcctggatggttctcgtgtccaccctgagacgtacgagtgggctcgtaagatg
gctgtggacgccctcgagtatgatgagtcagcagaagatgctaacccagccggagcgctg
gaggaaatcttggaaaatccagaacgtctcaaagatctggacctggatgcctttgctgaa
gaacttgagagacagggttatggcaacaagggaattactctatatgatatacgtgccgag
ctgagctgcaggtacaaagatctgagagttccctacagagtccccaacactgaagaggtc
ttcaacctgctcaccaaggagactccagagaccttttatattggtaagctgatcaccagt
atagtaactggtatcgctcaccggcggcctcagggagagagctacgaccaggccatacgt
aacgattctacagggctgtggcagtgtcccttctgccagcaggacaacttccctgaactc
agcgaggtgtggaatcattttgacagtggatcgtgtccgggtcaggcaatcggcgtgcga
tccaggttagataacggcgtccagggatttattcccaccaagtttcttagtgacaaagtg
gtcaaacaccctgaggagagggtcaaggtgggaatgacagttcactgccgcatcatgaaa
atcgacatagaaaaattcagcgttgacctcacatgccgtacctcggatttgatggacaag
gctaatgagtggaagctccccaaggacagctactatgactttgacacagagtctgaagac
cagaaacaggaggaggagttcaaaaagaagcaacagcgaacaccatatataaagcgtgtg
atcgcccatcccaacttccacaatatcagtttcaaccaggcagagaagatgatggagacc
ctggaccagggagacttgatcatcagaccaagcagcaagggagagaaccacctcactgtc
acctggaaagtggctgatggcatctaccagcacgtggacgtgagagaagaaggcaaagag
aacgcattcagcttaggacacactctctggatcaacaatgaagaatttgaagatctggat
gaaatcactgctcggtacattcagccaatggcatcatttgcccgggatctactggggcat
aagtacttccaggagtgcaacgggggaaacaaggagaaaatggaggagttactggtcagg
acaaagagggagaagcctacttttattccttattttatttcggcctgtaaagatttgccg
ggaaagttcattctgggctaccagcctcgcggaaaaccacgggttgaatatgtgaccatc
accccagatggcttccgctaccgttcacagatatttcctacagtaaacggactattccgc
tggtttaaggaccattaccaagagcctgtaccaggcatcactcccagcaacagcagccga
acaaggacacctgcgtccctgaacgccaccccggctaatatcaactgcctagacttgaca
cgagctgtcaacgccctcccacgcaacatgacttctcagatgttcagtgccatcgccgca
gtcacaggccagggccagaaccccaacaccacccccgcacagtggggctccagccagtac
ggctacggtggcagcacaggaggaggaggagggagctcctccgcttatcatgtatttgcc
acacctcagcagcccatggcgacgcccatgatgacgcctagctattcatacaccacgccg
agccagcaggccctgggcacgccgcagtaccccggctccaccccgcagtcgtcacactct
cacgcacacgcccatccacacgtgtcgcaccatggccatcacggccatcacagcagtcac
cacggccactcatccggcactccgtcatcctccacctcgtccagaggacggacgccacag
cagcagccaaaggcgagcggcagcaacgcctccgcagttgactggggcaagatggcggag
cagtggctgaaagagaaagaggcggagggccggaagaaagcccagaggatgaccccacga
ccgtcacccagccctatgatcgagagcacacccatgtccatcgccggagacgctacacct
ctgctggatgaaatggaccgatag
DBGET
integrated database retrieval system
