KEGG   Seriola dumerili (greater amberjack): 111217177
Entry
111217177         CDS       T05606                                 
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111217177 (exosc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdu03019]
    111217177 (exosc8)
Messenger RNA biogenesis [BR:sdu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     111217177 (exosc8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 111217177
NCBI-ProteinID: XP_022594656
UniProt: A0A3B4ULL2
LinkDB
Position
Unknown
AA seq 277 aa
MAAGFKTAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKVGNTTIIC
GIKAELANPTVEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEVIQ
TEDLCIDRGKLCWVLYCDMMCLDYDGNVLDACIVALLAALKNTQLPEITINKETCSPELN
LEKRHGLHIHKHPVATSFCIFDDSILIVDPTSEEESLATAELTVVTDEEDRLCSLHKPGG
SSLTGEKLQECINRATVRQREIHKLIDKVIYSVKTAQ
NT seq 834 nt   +upstreamnt  +downstreamnt
atggcggctggtttcaagactgctgagcctctggagtaccacaggagtttcctgaaagag
aactgccggcctgatggacgggagctgtcagaattcagaaccacaactctaaacataggg
tccatatccacagcagacggctcagccctggtgaaggttggaaacaccaccatcatctgt
gggatcaaagcggagttggcaaaccctacagttgaagcacctggtaaaggttacatcgtg
cccaacgtggacctgccgcctctgtgttcgtctcggtttcgaccgggcccgcctggagaa
caggcccaggctgccagccagtttatcgctgatgtaattgaaagctctgaagtgatacaa
acagaggacttgtgcattgacagaggaaagctctgctgggtgctctactgcgacatgatg
tgtctggactacgatgggaacgtgttggatgcttgtattgttgccctgttggctgctctg
aagaacacacaactcccggagatcaccatcaacaaagaaacatgttcaccagagctgaat
ttagaaaagagacatgggctgcatattcacaaacatccagtcgctacctctttttgtatc
ttcgatgactccatactgatcgtagaccccacgtccgaggaggagagtctggcgaccgct
gagctcactgtggtgacggatgaggaagatcgactctgctctctgcacaaaccaggtggg
tcgtccctgacgggagagaagctgcaggagtgtataaaccgagcaacagtgcgacagaga
gagatccacaaactcatcgacaaagtcatatacagtgtgaagacagcacaataa

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