Seriola dumerili (greater amberjack): 111217177
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Entry
111217177 CDS
T05606
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111217177 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111217177 (exosc8)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111217177 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111217177
NCBI-ProteinID:
XP_022594656
UniProt:
A0A3B4ULL2
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKVGNTTIIC
GIKAELANPTVEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEVIQ
TEDLCIDRGKLCWVLYCDMMCLDYDGNVLDACIVALLAALKNTQLPEITINKETCSPELN
LEKRHGLHIHKHPVATSFCIFDDSILIVDPTSEEESLATAELTVVTDEEDRLCSLHKPGG
SSLTGEKLQECINRATVRQREIHKLIDKVIYSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaagactgctgagcctctggagtaccacaggagtttcctgaaagag
aactgccggcctgatggacgggagctgtcagaattcagaaccacaactctaaacataggg
tccatatccacagcagacggctcagccctggtgaaggttggaaacaccaccatcatctgt
gggatcaaagcggagttggcaaaccctacagttgaagcacctggtaaaggttacatcgtg
cccaacgtggacctgccgcctctgtgttcgtctcggtttcgaccgggcccgcctggagaa
caggcccaggctgccagccagtttatcgctgatgtaattgaaagctctgaagtgatacaa
acagaggacttgtgcattgacagaggaaagctctgctgggtgctctactgcgacatgatg
tgtctggactacgatgggaacgtgttggatgcttgtattgttgccctgttggctgctctg
aagaacacacaactcccggagatcaccatcaacaaagaaacatgttcaccagagctgaat
ttagaaaagagacatgggctgcatattcacaaacatccagtcgctacctctttttgtatc
ttcgatgactccatactgatcgtagaccccacgtccgaggaggagagtctggcgaccgct
gagctcactgtggtgacggatgaggaagatcgactctgctctctgcacaaaccaggtggg
tcgtccctgacgggagagaagctgcaggagtgtataaaccgagcaacagtgcgacagaga
gagatccacaaactcatcgacaaagtcatatacagtgtgaagacagcacaataa
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