Seriola dumerili (greater amberjack): 111217198
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Entry
111217198 CDS
T05606
Symbol
frem2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111217198 (frem2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sdu04091
]
111217198 (frem2)
Lectins [BR:
sdu04091
]
C-Type lectins
Lecticans
111217198 (frem2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
111217198
NCBI-ProteinID:
XP_022594682
LinkDB
All DBs
Position
Unknown
AA seq
3125 aa
AA seq
DB search
MLFYRLLLCFSVTGFVSAQPDSSGLFYALRSELSEDAILVANNGIRVPFGRSVFIDPIND
LVIQTQPGDRCSITVLDNDPLSQRPGHLSPKKFPCDFGPNDVTYSHYGSRSPAKDRVRLQ
LRYDAQTETVIIPFMMEVEVVFTQLELLTKNMPLTVDNLKGLSNPIDKKILEFTYDRDSH
KCEVAALSGGSTLPRYGRLIDGGKLSNVMDCDEFTQADIRYEHTFDRKSPNRDYVPMVVE
LHDKEGNLVKQEYFHLMIRIREGEENTRPKPSFVSMMMMEVSQFVMTALTPDMLAAEDAE
SDPDELIFNITSPLSYEEGYIVSTDDRNLPITSFYQRDLRDLKIAYKPPSLDSDTERIFQ
LEFEVVDTDGAVSDPFAFMIVVKPMNSLAPVVTRNTGQLLYEGQSRPLFSTHNLEISDED
NLDMVAIAVVDGLRHGDLMVLGSQKKFFTPADLTTGVVVYQHDGSDTYSDNIVFKMTDGK
NEVEFLFPITIVPTDDEPPIINANTGLVLFKKQMMPISPLMLSAADIDSEDSTIKFTIVP
PFSTIGTVLLRQSDAPEDPSSWKFNAEDEVYEKEVTEWLQKDITDGKLFYKHTGPHNTDT
VMDQFVFTVQDDNDPPNESGESAFIIRILPIDDVPPELFPGTTLQMTVQEYKLTQFNKEV
LRYTDLDSEDRDLKYTVIQPPTDTDENNPVVFGSLVLTDSPDTEVTEFTQAQINHHKISY
GPPDVELGITAHVVQFRYTVEDTAGNSVEGAFTIYLQPVNNKPPQITNTGFTVLERGMHI
ITIAELDTTDLDTESKQITFTLSQPPKHGQIQVAFTDLEKKGVFRLEDISEGKISYTHDG
EETVSDEFQLDVSDGIHVVTVTVKVNVKPIDDETPTVSLPAGTIGSHMDVLENGATEITT
NVIQGHDDDTDDLQLTFIVEDPPVMGEILVKGVPATRFTQADIINGVVVYAHTGGEIGLA
SQLDGFNLTLTDMSDEWTVGGNKVNGVHVRVTILPVDSQAPEVGVGIQFSVIEGEKYAIG
PQHLDADDNDTPTDDILCTIIVQPTAGYVENISPAPGSEKSRSGTAISAFTIRDIREGNV
YYVQSIHKGVEPVEDRFTFRCSDGINFSENHFFPIVIIPANDEKPEIYLREIVVMEGMNI
VIDTPILNGADADIPPEELTFIISKPPKHGAILNQLPTGSVLVTNFTLEQIREASSIIYE
HDDSETTEDSFDVILTDGKYSVQKTAMVMIISVDDETPRMLINDGLEVEIGETKEINSKA
LKATDLDSDDSTLTYIIRFGPGQGVLQRKTPSGSLENITLGMNFTQGELDAGLLVYSHNG
QEGIRDLVKFDVTDGMNPLIDRYFYITVGSIDMVFPDVVSKGVSLREGGRVTLTTDLLST
TDLNSPDENLVFTVTRAPVRGHLECTDTPGMPIVSFTQLQLAGSKVYYIHTSDDELKMDS
FEFEVTDGYNPIFRTFRISIVDVDNKKPVVTVNSLVVTEGQIKLITPFELTAEDQDTAEK
LLKFTITQLPVHGKLLYNQSSPVTSFTKQDLNENLISYKHDGTESSEDSFSFTVTDGTHT
DFYVFPNTVFETRHPQTMKITIVAIDNGVPQIVVNKGAPALKILATGHLGFPISSKVLRA
EDRDSSPGSLVFHVTTQPKHGYIINLGHGNNSIDTFSQADIDDLNICYVLRNEENATSDL
FHFSVEDNGGNKLKGQQFRLDWAWISLEKEYYVVDEEDKFLEVVLKRRGYLGETSFIGIG
TQDGSAKKEEDFKGKSQRQVQFNPGQTRATWRVRILTDGKYEQAETFQILLSEPVMGVME
FPATATVEILDPSDESTVFFPEQIHSVEEDIGELFIPVHRSGDISQELMVVCYTQQGSAS
GTIPTTVLSYSDYISRPEEHGSILRFDKGEREKQCRVVIIDDSLYEGDESFNVTLSLPVG
GRLGMHYPTTKVNILEDMDDAPVFYFGELEYHVDESDGYVEVKVWRTGTDLSKTGTVIVR
SRKAEPVSAEAGNDYVGISRNLDFAPGVSMQTFKVTILDDLGQPELEGTESFELVLRMPV
QGVLGDPEKATVFINDSVSDLPKVQFREPVYTGEESDGQIAVTVYRSGDIRHKSTVRCYT
RQGSAQVASDFDERPNTEASVITFLPGEVEKPCVLSLVDDTLYEEGEELRLVLGNAKSDS
QFGASVGALSETLVKIKDTADKPIIRFVETKFSVSEPKEAGAVATVRIPVIRVGDTSKVS
VVRVHTKDGSAVSGEDYYPVSRDIEFKQGEKEHVVEVEVLFDGVREMREAFTLHLKPDEN
MVAETQVTKVIVYIEETNSMADVTFPSLPHVVSLFHYDDVARTPDNLHPPAGYPVICVTA
CSTKYPDYDKTGSICVSEHINNTLTRYRWLISAPAGPDGVTSPMREVDFDTFFTSSKMIT
LDSVYFQAGSRVQCAARAVNSNGDEGLELSSPIVTISQEEGMCQPRKMGTVGAEPFSAKL
RYTGADDPKHPNLIKVTVTMPHIDGMLPVISTRPLMNFDLTLSPDGTRVGNHRCSNLLDY
NEVTTGYGFITASTRTPESMGDAGPYQFSSSLRGNSTLRFYKNLNLEACLWEFTSYYHMS
ELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGTGGWQHFDLQSELRLTFVY
DTAILWKDGIGSPPQAELQGALYPTSMRINDQGRLVVNFRTKARFRGLFVESHSGGRIKR
AATSMSSMVMSMDHPGLTFNLTLMRSEPTYNQPVQQWTFTSDFAVRDYSGTYTVKLIPCT
TAQNTEYTVPPVCSPREPVTFDLDIRFQQVSDPVAVEFSLNTQMFLLSKRSLWLSDGSMG
FGQESDVAFSEGDTIYGRVMVDPVQNLGDSFFCSIEKVFLCTGADGYVPKYNPTKFEFGC
LADSPSLLYRFKILDKAQPETQANGFGDVSFNAKLAVDDPSAMSLVRQPGSDGFRVDSAA
MFQVAAGREWYIHTIYTVRSKENANRGIGKRSLEYHSLVSTSNDLVLTASSGKGHRSRRS
AGDEVPEVAEDIGVDNNRGTNIMHIALDRTKRRAAGSDELFVDRPEPSELNAEKEEEGLV
TVVGALVGLLLTVLVIVIVVLVLRSRQKDVKEGWREGVQEVVKGSVSTEPMLVVRMQDCH
NSSEV
NT seq
9378 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctacagacttctcctgtgtttctcagtaacaggttttgtttccgcgcagcct
gacagctctggattattttacgctctcagatctgaactgtcagaagatgcaatcctggtg
gctaacaacggaatacgcgtgcctttcgggagatcggtcttcatcgatcccatcaatgat
ttggtgattcagactcagccgggggatcgatgcagcatcaccgtcctggataacgacccg
ctctcacagagacccgggcacctctctcctaaaaagtttccgtgtgatttcggccccaat
gatgtgacgtactcccactacggctccagaagtccggctaaagacagagtgcggctgcag
ctcaggtatgacgctcaaaccgaaaccgtcattatcccgttcatgatggaggtggaagtt
gttttcacgcagctagagttactcaccaaaaacatgcctctcactgttgataacctgaag
gggctcagtaatcctattgataagaagattttagagtttacctatgatagagactctcat
aaatgtgaggtggcagctctgtctggcggcagcactctgcccagatatggaagacttatt
gatgggggtaaactttccaacgtgatggactgtgatgaattcacacaggcagacatccgc
tacgagcacacgtttgaccgcaagtcccccaacagggattatgttcccatggtggtggag
ctgcatgataaagaaggcaacctagtgaagcaggagtatttccatcttatgattcgcatc
agagagggagaggaaaacactcgccccaaacccagctttgtgtccatgatgatgatggag
gtcagccagtttgtcatgacggccctcacccctgatatgctggctgcagaggatgcagag
tcagacccagacgagcttattttcaacatcacctctcccctatcttatgaggagggctac
atagtcagcactgatgacagaaaccttcccatcacatccttctaccagagagacctgcgt
gatctgaaaatagcttacaagcccccctccctggactcagacactgagaggattttccag
ctcgagttcgaggtggtggacacagacggggccgtctcggaccccttcgctttcatgata
gtcgtgaagccgatgaattccctggccccagtcgtgacgcgcaacacaggtcagctgctg
tacgagggccagtcccggcccctcttcagcacccacaacctggagatcagcgacgaagac
aacctggacatggtcgccatcgcagtggtggatgggctgcgccacggggacctcatggtg
ctgggctctcaaaagaaattcttcacgcctgccgacctcaccacaggggttgttgtgtac
cagcacgatgggagtgacacgtacagcgacaacattgtgttcaagatgacggatgggaag
aacgaagtagaattcctttttccgatcacaatcgtccccactgatgacgagcctccaatt
atcaatgccaacactggcctggtgcttttcaaaaagcagatgatgcccatatctcccctc
atgctcagtgctgctgacatcgactctgaagactcaactatcaaattcaccatcgtcccc
cccttctccacaatcggcacggtgctcctgaggcagtcggacgcccctgaggacccctcc
tcttggaagttcaacgctgaagacgaagtgtacgagaaggaggtgacagagtggcttcag
aaagatatcactgatgggaagctgttttacaagcacacaggccctcacaacaccgacacc
gtcatggatcagtttgtgttcacggttcaggacgacaatgacccccctaatgagtcagga
gagagcgcgtttataatccggattttgcccatcgacgacgtaccccctgagctgttccct
ggcaccaccctgcagatgacagttcaggagtacaagctcactcagtttaacaaagaagtt
ttgcgctacactgatttggactccgaggaccgtgacctcaagtacaccgttatccagccc
ccgacagatacagatgaaaataacccagtcgtgttcggctctttggttctgacagacagc
ccggacaccgaggtcacagagttcacacaagctcagattaaccatcataagatatcctac
ggccccccggatgttgagcttggaatcacagcccacgtggtgcagtttcgttacactgtg
gaggacacagctgggaatagtgttgaaggggctttcactatctacctccagcccgtcaac
aataaacctcctcagattacaaacactggctttactgtgctcgaacgcggcatgcacatc
atcaccatcgctgagctagacaccacggacctcgacacggagagtaaacagattaccttc
actctaagccagcctcctaaacatggccagatccaggttgcattcactgacctagagaaa
aaaggggttttcagacttgaggatatctcagaggggaagatatcatatactcatgacggg
gaggagacggtgagcgatgagttccagctggatgtgagtgatgggatccatgttgtgacc
gtgactgtcaaagttaatgtaaagcccatcgatgatgaaactccaaccgtcagcctgcct
gcgggaacgatcggttctcacatggatgtgctggaaaacggagccacagaaatcacaacg
aatgtcatccaaggccatgatgatgacacagacgacctccagctgacctttattgtggag
gatcctccggttatgggtgaaatattggttaaaggagttcctgccactaggttcacacag
gctgatattattaacggcgtggtcgtgtacgcacacaccggtggtgagataggtctcgcc
tcccagctggacggctttaatttgactctcacggacatgtccgatgaatggacagtaggt
ggcaataaggtcaacggggttcacgttcgagtcactatccttcctgttgacagccaggcc
cctgaggtcggagttggtattcaattcagtgtcattgaaggggagaaatacgccatcggc
cctcagcatttggacgctgatgataatgacactccaacagatgatattctttgcaccatc
attgtgcagcctactgccggctatgtggaaaatatatcaccagccccaggctcagaaaag
tccaggtcaggcacggctatcagtgcctttaccatcagagacatcagggaggggaatgtc
tactatgtgcagagcattcacaaaggggtagagccggtggaggacaggttcacatttcgg
tgctccgatggcatcaatttctctgagaaccatttctttccgattgtcatcatcccggca
aatgacgaaaagccggagatttatttgagggaaatagtcgtgatggaggggatgaacatc
gtcatcgacactccgattctgaatggggccgatgccgatatcccacctgaggagctgacg
ttcatcatttccaaaccccccaaacacggtgccattttgaaccagctacccacaggctca
gttctggtgactaatttcactttagagcagatcagagaggcatcgagtattatttatgag
cacgatgactcagagacaacagaggacagctttgatgtgattctgacggacggaaagtac
tctgtgcagaaaacagccatggttatgatcatctctgtggatgacgagactcccagaatg
ctcatcaacgacggtctggaggtggaaattggagagaccaaagagatcaacagcaaagcg
ctcaaagcgacagacttagattcagatgacagcacactcacatatatcatccggtttggg
cctggtcagggtgtcctgcagaggaaaactccctccgggtctctggagaatatcacgcta
ggaatgaatttcacacaaggtgagctcgatgcagggctcctagtttactcacacaacggg
caggaaggcatccgagacttggtcaaatttgatgtcacagatgggatgaacccactaatc
gatcgttacttctatatcaccgtgggcagcatcgacatggtcttccctgatgttgtcagt
aaaggcgtgtctctgagagaaggtggcagggtgactttgaccacagatctcctcagcacc
actgacctcaacagccccgatgagaacttggtctttactgtcacaagggcccctgtcagg
ggccacttggagtgtacagacactcctgggatgcccattgtgtcttttacacagctgcaa
ctggctggcagcaaggtttactacatccacacctccgacgacgagttgaaaatggacagt
tttgagtttgaagtcactgacggctacaatcccatattcagaacattcagaatctctatt
gtggatgttgacaataagaaaccggtcgtgactgtaaatagtctagttgtgacagaaggg
cagattaagctgattacaccatttgagctcaccgctgaggaccaagacacagctgagaag
ctgctgaaattcaccatcactcagcttcctgttcatggcaaactcctctacaaccaatcc
tcacctgtcaccagcttcacaaaacaagacctaaatgaaaacctcattagctacaagcac
gatggcacagaatcatcagaggactccttctccttcactgtcaccgacggcacacacact
gacttctatgttttccccaacacggtctttgagacccggcaccctcaaaccatgaagatc
actatcgtggccatagacaacggcgtcccacagatcgtggtcaataaaggcgctcccgct
ttgaagatcctggccacaggtcacctggggttccccatcagctccaaagtgctgagggca
gaggacagagacagcagcccaggctccctggtgttccacgtcaccacgcagcccaaacac
ggttacatcattaacctgggacatgggaacaactccatcgacacatttagtcaagctgat
atcgatgacttgaacatctgctacgtgttgcggaatgaagaaaatgccacatctgatctc
ttccacttctctgttgaggataacggtggtaacaagctgaaaggacagcagttccggctg
gactgggcctggatctctctggagaaagagtactatgtggtggacgaggaggacaagttt
ctggaggtggtgcttaagcggagaggctacctcggagagacgtctttcattggcattggc
acccaggatggtagtgcaaagaaggaggaggatttcaagggtaagtcccagaggcaggtc
cagttcaacccgggtcagaccagagccacgtggcgggttcgcatcctgactgatgggaag
tacgaacaggcggaaaccttccagatcttgctttcggagccggtgatgggagtgatggag
ttccctgccacagcaacagttgagatcctggatcccagcgacgagtcgactgtgttcttt
cctgaacagatccactcagttgaggaagatattggggagcttttcatcccggtgcaccga
agtggagatatcagccaggagctcatggtggtctgctacacacagcaggggtctgcctca
ggaacgatccccaccaccgtcctgtcttactcggactacatctcccgtccggaggagcac
ggcagcatccttcgcttcgacaagggtgagagggagaagcagtgtcgcgtggtgatcatc
gacgactctctgtacgagggggatgagagcttcaatgtcacgctgtcactgcctgtcggg
ggacggctgggaatgcactaccccaccaccaaagtcaacatcttggaggatatggacgat
gctccagtgttttactttggagagctggagtatcatgtggatgagagtgatggatacgtg
gaggtcaaagtgtggaggacggggaccgatctgtccaagactggcacagtcatcgtccgc
tctcgcaaggccgagcccgtgtcggcagaggccggtaatgactatgtgggcatcagtcgt
aacctggacttcgccccgggtgtcagcatgcagacgttcaaggtcaccattctggatgac
ctgggacagccagagctggaggggactgagagctttgagctggtcctacggatgccagtg
cagggcgtcctgggagatcctgagaaggctacagtctttatcaatgactcggtgtctgac
ttgccaaaggtccagttccgtgagcctgtgtacaccggagaggagagtgacggtcagatc
gccgtgacagtgtatcgcagcggcgacatcagacacaaatccactgttcgctgttatacc
cgccagggctccgcacaggtcgcctctgactttgatgaacgacccaacacagaagcgtcc
gtcatcactttcttaccaggcgaggtggagaagccgtgtgttctgtcactggttgatgac
acgctgtatgaagaaggagaagagctacggttggttttaggcaacgcaaagagcgactca
cagtttggcgcgtcagtgggagctctgagtgagaccctggtgaaaatcaaggacacagct
gacaaacccatcatccgttttgtggaaaccaagttcagtgttagtgaaccgaaagaggcc
ggtgccgtggcaactgtgaggatccccgtgatacgagtgggggacacatcaaaggtgtca
gtggtccgcgttcacaccaaagacgggtcggctgtctctggggaggactactaccccgtg
tctcgagacatcgagtttaaacaaggggaaaaggaacacgtggtggaggtggaggtgctg
tttgacggcgtcagagagatgagggaggcctttactctccacctgaagccggatgaaaac
atggtggctgaaacacaggtaactaaagttatagtttacatcgaggagaccaacagtatg
gctgacgtcaccttcccctccttgcctcacgtggtgtctctgttccattacgacgatgtt
gccaggacaccggacaacctccacccacctgccggctaccccgtcatctgcgtgacggct
tgcagcacgaaatacccagattacgacaagacgggctctatctgtgtcagcgagcacatc
aacaacaccttgacccgctaccgctggctcatcagcgcccctgctggccccgatggcgtc
accagtcccatgagggaggtggactttgacaccttcttcacctcctccaagatgatcacg
ctggattcagtctacttccaggcaggctccagggtccagtgtgctgctagggctgttaat
tctaacggggatgaaggtttagagctcagcagccccattgtcactatcagccaggaggaa
ggtatgtgtcaaccgcgtaagatggggaccgttggcgctgagcctttctctgccaagcta
cggtacactggagcagacgacccgaaacatcccaacctcatcaaagtgactgtcaccatg
cctcacatagatggcatgcttccggtaatctccactcgacctctcatgaactttgacctg
acgctcagtcctgatggaacccgggtcggaaaccaccgctgttccaacttgcttgactac
aacgaggtcaccaccggttacggcttcatcaccgcttcgacgcgcacacccgagagcatg
ggagacgcgggtccctatcagttcagcagctctctgcgagggaacagcacactgcgcttc
tacaaaaacctcaacctggaagcctgtctctgggagttcaccagctactaccacatgtct
gagctgctcactgactgcggaggcaccatagggactgatggacaggtgctgaacctggtc
cagtcctacgtgaccctgcgtgtgcctctttacgtgtcgtacgtattccactcccccgtg
ggaaccggtggctggcagcacttcgacctgcagtccgagctgcgcctcacttttgtgtac
gacacagccattctctggaaggacggcatcggcagcccccctcaggctgagctgcagggt
gcgttgtatcccaccagcatgcgcatcaatgaccagggacgtttggtggtaaacttccgc
accaaggctcgtttcaggggtctgttcgtggagtctcattctggaggcagaattaaacga
gctgcaacctccatgtcatccatggtgatgagcatggaccacccaggcctgacctttaac
ctcaccttaatgaggagtgagcccacctacaaccagccggtccagcagtggacattcacc
tctgactttgctgtgagagactactctgggacgtacactgtgaagttgatcccctgtacc
acagctcagaatacagagtacacggttccacctgtttgcagtcccagagagccagtcacc
ttcgacctagacatcagattccagcaagtgagcgacccggttgcagtggaattcagtcta
aacactcagatgttcttgttgtccaagaggagcctgtggctctctgatggctccatgggt
ttcggtcaggagagtgacgtagccttttcagagggtgatacgatctatggccgtgtgatg
gtggaccccgtgcagaatctgggagactctttcttctgtagcatagagaaagtgttcctc
tgcaccggcgccgatggatatgtgccgaagtacaacccgaccaagttcgaattcggctgc
ctggctgattctccgtcattgctttatagattcaagattcttgacaaggctcagccagag
actcaggccaacgggtttggtgatgtcagttttaatgctaagctggcagtggacgatcct
tcagctatgtcccttgtcagacagccaggatctgatggctttagagtggattctgcagcc
atgttccaggttgctgcaggccgtgagtggtacattcacaccatttacacagtccgctcc
aaagagaatgctaacagaggcattggaaagcgcagcctagagtaccactccttggtttcc
acgagcaacgatctggtcttgaccgcatcgagcggcaaaggtcatcgctccaggaggtcg
gctggcgatgaagtccccgaggttgcagaggatatcggagtagacaacaaccgtggcacc
aatatcatgcacatcgctttggaccgcaccaagcggcgggcagcggggtcggatgagttg
ttcgtcgacaggcctgaacctagcgagttgaacgcagagaaggaagaggagggtctggtg
actgtggtgggggcgctggtggggctgctgctgaccgtccttgtcattgtcatcgtggtg
ctcgtgctgagatccagacagaaggatgttaaggaggggtggagggagggggtgcaggag
gtggtgaaagggtctgtcagcacagagcccatgttggtggtgaggatgcaagactgccac
aacagctcggaggtctga
DBGET
integrated database retrieval system
