KEGG   Seriola dumerili (greater amberjack): 111217234
Entry
111217234         CDS       T05606                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu00565  Ether lipid metabolism
sdu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    111217234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sdu03036]
    111217234
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdu04147]
    111217234
Chromosome and associated proteins [BR:sdu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    111217234
Exosome [BR:sdu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111217234
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_EML Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_DCAF4 LisH WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_RIG_2nd LisH_PAC1 Beta-prop_SPT8 eIF2A Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_WDR11_2nd Pox_A_type_inc Beta-prop_NUP159_NUP214 ARMC9_LisH SutA-RBD LisH_2 DUF2570 LisH_WDR26
Other DBs
NCBI-GeneID: 111217234
NCBI-ProteinID: XP_022594733
LinkDB
Position
Unknown
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDMNEEVDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTHGGSVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMSIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVASKDCKAELREHEHVVECIAWAPDSAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSTGICLMTLVGHDNWVRGVLFHPGGRFIVSCADDK
TIRIWDYKNKRCMKTLCAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagagacaaagagatgaactaaaccgggctatagccgactatctccgt
tccaatggatacgaggaagcctattccaccttcaagaaagaggcagagttagatatgaat
gaagaggtagataaaaagtatgcaggacttttggaaaaaaaatggacctcagtcatcaga
ttacagaagaaggtgatggagttggagtcaaagttgaatgaggcaaaggaggagatgacg
catggaggatctgtgggtcagaagcgagaccccaaggagtggatcccccgtcccccagag
agatacgccctgagtgggcaccgcgctccagtcacgcgtgtcattttccaccctgtcttt
tctgtcatggtcacagcctcagaggatgctaccataaaggtgtgggactatgaggcgggg
gactttgaacgaaccctgaagggccacacagactctgtgcaggacatctcctttgaccag
acaggaaagctgctggcttcatgttcagctgacatgagcatcaaactctgggactttcag
gggtttgagtgcatccgaacaatgcatggccacgatcacaacgtgtcgtctgtagccatc
atgccaaatggtgaccacatagtgtctgcctccagagacaagaccatcaagatgtgggag
gtggccactgggtactgtgtgaagaccttcacaggccacagggagtgggtgaggatggtg
cgtcccaaccaggacggctcattgatcgccagttgctccaacgaccagacggtgcgtgta
tgggtggtcgcctcaaaggattgcaaagctgagttgcgggagcatgaacatgtggtagag
tgtatcgcctgggcccctgacagtgctcaccccaccatcctggaggccacaggctcagag
agcaagaagagtggaaagcctggccccttccttctctctggatccagagataaaaccatt
aagatgtgggatgtcagcactggcatctgccttatgactctggtgggacatgacaactgg
gtgcgtggcgtgttgtttcaccctggaggaagattcatagtgagctgtgctgatgacaaa
accattaggatctgggactacaagaacaaacgctgcatgaagaccctgtgtgcccatgaa
cactttgttacctctttggatttccacaagactgctccctacgtggtgacaggcagtgtc
gatcagacagtcaaagtctgggagtgccgctga

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