Seriola dumerili (greater amberjack): 111217334
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Entry
111217334 CDS
T05606
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111217334 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111217334 (ogg1)
Enzymes [BR:
sdu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
111217334 (ogg1)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111217334 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
111217334
NCBI-ProteinID:
XP_022594872
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MAKHAMLSSGAKIWRSLACTKSELRLDLTLACGQSFRWRETAEGHWTGVMGGRVWTLTQT
DDTLWYHVYKNQEGQKWGCDRKGRAGISLQEENKPEKRFKGALKVEEDEIVAETAVQDTD
EEKEMLRDYFQLNVELGELYREWRAADPHFKKIADIFTGVRMLRQDPTECLFSFICTSNN
HISRIQGMVERLCQALGAPLCQLDQTSYYDFPSLTALADSSVEACLRDLGFGYRARFLQQ
SAKQILDSHGLQWLDGLRSVPYLQARDALRTLPGVGTKVADCACLMSLDKAEAVPVDTHV
WQIAKRDYKYAAGNGQKSITDKLHRDIGDFFRKLWGPYAGWAQSVLFCADLKKFQKLKEM
PLMQPKKEEEDRDEEETRIACKKTKMKVEENQTVKHMKTKSACHKKAKMTVKKEKVV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacatgcgatgctgtcatcgggggcaaaaatatggagatctctggcctgcaca
aagtcagagctgcggctggatctcacccttgcctgtggacaatctttccgctggagagaa
accgcagagggccattggaccggagtgatgggaggacgagtgtggactctgacccagaca
gatgacaccctgtggtaccacgtttataaaaaccaagaagggcagaaatggggatgcgac
aggaaggggagagctggtatttctctccaggaggaaaacaagccagagaagagattcaaa
ggggctttgaaggtagaagaggatgagatagtggctgagactgcagtgcaggacactgat
gaggaaaaagagatgctgagagattacttccagctgaatgtggagttgggagagctgtac
agagaatggagagcagcagatccccacttcaagaaaattgcagatatcttcacaggtgtg
cgaatgctgcgccaggaccccactgaatgcttgttttccttcatttgcacctccaacaac
cacatctctcgtatccaaggcatggtggagagactgtgtcaggctctgggtgccccactg
tgccagctggatcaaacctcttactatgactttccttccctaactgcacttgcagacagc
agcgtagaggcatgtctcagggatctcggttttggatacagggctcggttcctgcagcaa
agtgcgaagcagattcttgacagccatggactccagtggcttgacggtctgcgcagtgtc
ccatatctgcaggcccgtgatgctctgcgcactctccctggtgtgggcaccaaggtggca
gactgtgcctgtctgatgtccctggataaggcagaggccgtgcccgttgatacacatgtg
tggcagattgctaagcgtgactacaaatatgctgctggcaacggacagaagagcatcaca
gataaacttcacagagatattggtgattttttccgaaagctgtggggtccttatgctggt
tgggcacagtcggtgttgttctgtgctgacctcaagaagttccaaaagctaaaagaaatg
ccactgatgcagccaaagaaagaggaagaagacagagatgaagaagaaacaaggatagca
tgcaagaaaactaaaatgaaggtggaagaaaatcaaactgtgaagcacatgaaaactaag
tcagcatgccacaagaaagcaaagatgactgtcaagaaagagaaggtggtatga
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