Seriola dumerili (greater amberjack): 111217379
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Entry
111217379 CDS
T05606
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111217379 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111217379 (mbd4)
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111217379 (mbd4)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
111217379 (mbd4)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111217379 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
111217379
NCBI-ProteinID:
XP_022594939
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MHPTSRDIQLETSGNIDNKSHEDGNDLCHTSIMPPGWIREVRQRKAGKTAGKLDVYITSP
EGQKFRSRASLHAFLLKNREGNLDINLFDFTTSKDDVITTSQIFPSQMKQKRTKKKHADG
QQETTQDATEILDPPPHKSKRASKEETVKSADDNNHINTDVLIEVLEVCRDKMDEAVKCC
KQAEPSATVDDVKLQNSPQRVGLREKLLRLAPSRKQKNTSCVHEDKEAESHPSVPTLNVE
PATESENEGEDEQGADEKQIHSKGDNREEVLLPDITGSSCTPVRDSQNKSKGLEDKRKTS
PYFSGKHFKDGLSPPRRKVFKKWTPPRSPFNLVQETLFHDPWKLLVATIFLNKTSGKMAI
PVLWQFFERYPSAEVTRQADWKPMSELMKPLGLYELRAKILIRFSDEYLAKQWRYPIELH
GIGKYGNDSYRIFCVEEWRQVTPEDHKLNKYHAWLWENHENLGI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctactagccgtgacatccagctggagaccagtggaaacatagataacaaaagt
catgaggatggtaatgatttgtgccacacttccataatgccccctggctggatcagggag
gtgaggcagaggaaagcaggcaagacagcaggcaaactggacgtctacattacaagtcct
gaagggcagaagttccggtcaagggcatccctgcacgctttcctcctaaaaaacagagaa
gggaacttagacataaacctttttgatttcaccacatccaaggatgatgtcatcaccact
tcacaaatattcccctcccaaatgaaacagaagagaacaaagaaaaaacatgcggacgga
cagcaggagacaacccaagatgcaacagaaattctggatccaccgccacataaatctaaa
agagcgtctaaagaagaaactgtaaagagtgcagatgataataaccatattaatactgac
gttttaatagaggttttagaagtgtgtagagacaaaatggatgaggctgtgaaatgctgc
aaacaagctgagccttcagcaacagtggatgatgtcaaactgcagaacagccctcagaga
gtcgggctgagagagaagcttctccgactagctccgtctagaaaacaaaaaaacacttcc
tgtgttcatgaggacaaagaggcagagtcacacccttctgtcccgactctgaatgttgaa
cctgccactgagagcgagaatgaaggtgaggatgaacaaggtgcagacgagaaacagatt
cacagcaaaggcgacaacagggaggaggtgttgttacctgacatcactggcagtagctgt
acaccagtgagagattcccagaataagtccaagggcttggaagacaaacggaaaacgagc
ccttatttcagcgggaaacactttaaagatggacttagccctcccaggaggaaggtcttc
aagaagtggacccccccccgttctccattcaaccttgtacaggaaacccttttccacgac
ccctggaagctcttggttgccaccatttttctgaataagaccagtggcaagatggccatt
cctgtactgtggcagttctttgagcgttacccatccgcagaggtgaccaggcaggccgac
tggaagcccatgtctgaacttatgaagccacttggcctgtatgagcttagagccaaaata
ctcatccgcttttcagatgaatatctagctaaacagtggcgttaccccatcgagctgcat
ggtattgggaagtacggcaacgactcctacaggatcttctgtgtggaagagtggagacaa
gtgacacctgaagatcacaagttaaacaaataccacgcttggctgtgggagaaccatgaa
aaccttggaatctga
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