Seriola dumerili (greater amberjack): 111217404
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Entry
111217404 CDS
T05606
Symbol
dcaf1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sdu01001
]
111217404 (dcaf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111217404 (dcaf1)
Enzymes [BR:
sdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111217404 (dcaf1)
Protein kinases [BR:
sdu01001
]
Serine/threonine kinases: Other
Other
111217404 (dcaf1)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111217404 (dcaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
ARM_PUB
EIF3I
WD40
WD40_Gbeta
LisH
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
111217404
NCBI-ProteinID:
XP_022594979
LinkDB
All DBs
Position
Unknown
AA seq
1556 aa
AA seq
DB search
MASASASVDSKAELTALLEQWERDQQGSTQELVNILTKISELVEKETEEYHKADPDPFDD
RHPGRADPECVLGHLLKILFKNDDFMNALVNSYVMTSREFSLNAAACRLLQNIMPGLETA
VVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRL
RELQDKDAENKREIKRPSPRKTLSEPLLPLDEETVDGGFEEKSFTPGRNGAEREGTGPEG
DGEIPFSTIEPENEVSFRLNSPHKTSSRANSAVKTMMKPMSAPSSLIHQGMSDGSSYLKR
KLERESGRTSKQKLNFSLPEPERNFNELSNSSWSEMSPWVIGNNYHLYPLTPEIEQRLIL
QYLTPLGEYQELLAVFMQMGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEF
VAHGGVQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVGYTLWLLEC
SHASGCCHATMFFSISFSFRAVLELFDKQDGLRRLVNLISTLEILNPEDQGALLSDDEIF
SSRQTAKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYSREQVVEM
MEFLIEYGPLRLYWEPAEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILT
VVPKTQLLLSEAVVVLDEGGSTVSTVGMSIVLAVAEGEVFVNDAEIQKSALQVVINCVCA
PDKRMSSIGKFIAGTPRRRLPQQTKASESVLTKMWNVVQSNNGIKVLLSLLTVKMPITDA
DQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCKFAAE
LIERISGKPLLIGTDVSLAWLQRASVVAQSRITFPEKELLLLIRNHLVAKGLHDTATTLT
KEADLPMACLSHSSHSTSAFPPVAPPPPASPVATLPRTPRLANGVGSRLGNHPSHSSTPG
SSHPQTRPSTSQPTGASSSAFPSMSVPHCSNGSPLIGRIVFSRERQTGCTTVSCKKPRVL
RQKSDHGAFSQSPAMKKQFDRHLPSPPALDSIITEYLREQHARCKNPVATCPPFSLFTPH
QCPEPKQRRQAPINFTSRHTRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREADEDESG
FMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTSAS
WSYPLSALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHIARIYDIQTGQVTLTLN
NPDLANNYKRNCATFNPTDDLVLNDGVLWDVRTAQAIHKFDKFNMNISGVFHPNGLEVII
NTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDEDDMMEMQMKSPFGSSFR
TFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLAEEE
EEDEEDQEDDDQEEDDDDDEDSDDDVDTDPLIAELENENGGEDEDDEEEDDGNDEFSPSD
EEVARLLEEDVDIGDDDDEDDNDEDDSDNDDVDLEGDNDSSDNSDLEDDIILSLNE
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcgtctgccagtgtggactccaaggcagagctgactgctctactggaacag
tgggagagagatcaacaaggcagcacgcaggagctggttaacatcctcacaaaaatctct
gagcttgttgagaaggagacagaggagtatcacaaagcagatccagacccttttgatgat
cgacatcctgggagagctgatccagaatgcgtgttagggcacctgctcaagatcctgttc
aagaatgatgacttcatgaacgcactggtgaatagctatgtgatgaccagcagagaattt
tccctcaatgcagcagcttgtcggctgcttcagaacatcatgcctggattggagacagcg
gtggtctttcaagaaaaggagggtatagttgaaaggctgtttaagtgggctcaggaggcc
gagcagcccctcagaatctatgctacaggcttgttggctggtgccatggagaaccaggac
attgcagccaactacagagaggagaactctgttttggtgcctttgatgctgcatcggtta
cgtgagcttcaggataaggatgctgagaacaaaagggaaatcaaacgacccagccccagg
aagactttgagtgagcccttgttacctttggatgaggagactgttgatggaggctttgaa
gagaagtccttcacaccgggcagaaatggagctgaaagggaggggacggggccagagggg
gatggcgaaattcccttttcaaccattgagcccgaaaacgaggtttcgttccgtctcaac
tctcctcataagaccagcagccgtgccaactctgctgttaaaaccatgatgaagcccatg
tctgccccgagttcactgatacaccaaggcatgtctgatggcagcagttacctaaaaagg
aagctagagagagagagtggcaggacctcaaaacagaagctaaatttctctttgccagag
ccagagaggaacttcaacgagctttccaacagcagctggtctgagatgagcccctgggtg
attggcaacaactatcatctgtaccctctaaccccagagatcgagcagaggctcatcctg
cagtatctcactcctctgggggagtatcaggagctgctggcagtgttcatgcagatggga
gctcgtgagctactcatgcattatatggatctaaagcagaccaatgatgtgcagctaacc
tttgaagctctcaagtacctggcatctctgctgctgcacaagaagtttgctgcagagttt
gtggctcatggaggagttcagaagttgctggaaatccccaggccatctatggctgccact
ggagtgtctctgtgcctctactatcttgcctataaccaagatgccatggagagggtgtgc
atgttgccccactccatcctgtcagatgtggttggttacacgctgtggctgctcgaatgc
tcacatgcgtccggctgctgccacgccaccatgttcttttccatctccttttctttccgt
gccgtcctggagctttttgacaagcaggacggtctccggcgccttgtcaatctgattagc
acactggagattctgaaccctgaggaccagggagcgctgctgagtgatgatgagattttc
tccagcaggcagactgccaagcacacctgcatggccctgcgcaggtactttgaggcccat
ctggcaatcaaggtggagcaggtgaagcaatccctgcagcgcacagaggggggtgccccc
attcactctcagccgtactacaaggcagtcagctatagccgtgagcaggtggtggaaatg
atggagtttctgatagaatatggaccactccggctttattgggagccagcagaggtcttc
cacaagctgtcttgtgtccagcttctcctgcaacttatttccattgcctgtgactggagg
acctactatggcagaagtgatacagtgcgttacgccctcgacatcctgagtatcctcaca
gttgttccaaagacccagcttttgttgtctgaggctgttgttgtgcttgatgagggagga
tccactgtttccactgttggaatgagtatagtcctggcagtggcagagggagaggtattt
gtgaatgatgctgagattcagaagtcggctctgcaggttgtcatcaactgcgtctgcgct
ccagacaaacgcatgtcaagcattggcaagttcattgcaggcaccccccgtcgccgcctg
ccccagcagaccaaagccagcgagagtgtgctcactaagatgtggaatgtggtgcagtcc
aacaatggcatcaaggtgctgctgtccctgctgacggtgaagatgcccattacagatgca
gaccagatccgagctctggcctgtaaggccctagttggtctgtctcgctccagctctgtc
agacagatcatcagcaagctgcctttgttcagcagcggacacatccagcagctcatgaag
gagcctgtgctccaggacaaacgcagcgaacatgtcaagttctgtaagtttgcagctgag
ctgatagaaaggatctctggaaaaccgctgctgattggtacggacgtgtctctggcgtgg
ctacagagggccagtgtggtcgctcagtccaggatcaccttccctgagaaagagctgctg
ttgcttattaggaaccaccttgtggccaaaggccttcatgacacggccaccacactcacc
aaggaggccgatctcccgatggcatgtctctctcattcttcacattcaacttcggctttc
ccccctgttgctcctcctccacctgcctctcccgttgctactctcccccgcacacctcgg
ctggccaacggtgtcgggtcaagactcggaaaccatccttctcattcatccacccctggg
tccagccatccacaaacacgtccctctacatcacaacccactggagcttcttcttctgct
ttcccctcaatgtctgtcccccactgtagcaatggctccccgctgatcggccgaatcgtt
ttctctcgtgaacggcaaacagggtgcactacagtgagctgcaagaaacctcgggtgctg
aggcagaagtctgaccatggggccttcagccagagtccagccatgaagaagcagtttgac
aggcacctgccctccccacctgcgttagacagcattatcacagagtacctgagggaacag
cacgcacgctgtaaaaacccagtcgcaacatgtccgcctttctctctcttcacaccccat
caatgccccgagcccaaacagagacgccaagcacccatcaacttcacatctcgacacaca
cggagagttatttatcctaaatacggaggagtagatggaggatgctttgaccgacatctc
atcttcagcaggttccgtcccatttccgtgttcagggaggctgacgaggatgagagcggt
ttcatgtgttgtgccttctcagctcgcgagcggttcctgatgctcgggacgtgcacagga
cagctcaaactctacaatgtgtttactggccaggaggaagcaagctacagctgtcacagc
tcagccatcactcacctggagccctcaagggatggttctctgctgttaacgtcagcctct
tggagttaccctctgtctgcactgtggggcatgaaatcagtgttcatcatgaagcattcc
tttctgggtgaccattatgtggagttcagtaagctttcacaagatcgtgtcattggaact
aaggaacatatagcacgtatttatgacatccagacgggacaggtaactctgactctcaac
aacccagacctggctaacaactacaagaggaactgtgccaccttcaaccccacagatgac
ctggtactgaacgacggcgtgctgtgggatgtgcgcacggctcaggccatccacaagttt
gacaagttcaacatgaacatcagcggtgtgttccatcccaacggcctggaagtcatcata
aacaccgaaatttgggatctgcggaccttccacctcctccacacagttcctgctctggac
cagtgcaggattgtcttcaacaacaacggcactgtcatctatggcgcaatgttgcaagct
gatgatgaagacgacatgatggagatgcagatgaaaagtccatttggttcatcgttcagg
acctttaatgccacagactacaaaccaattgccactattgatgtcaagaggaatatattt
gacctttgcacagacacaaaagactgctacctagctgtgattgagaaccaagactcggtt
aacaccgacacggtgtgcagactgtatgaagttggtcggcagagacttgcagaggaagag
gaggaggacgaggaggatcaggaggatgatgatcaggaggaagacgatgacgatgacgag
gactcggatgatgatgtagatacagatcctcttattgcggagctagagaatgagaacggt
ggagaggatgaggatgacgaagaggaggatgatgggaatgatgaattctctccctctgat
gaggaggtcgcccgtcttctcgaagaggatgttgacatcggggatgacgatgatgaggat
gacaatgacgaagacgactctgataatgacgatgttgatcttgaaggcgacaatgacagc
tccgacaactctgaccttgaggatgacatcatcttatccctgaatgagtga
DBGET
integrated database retrieval system
