KEGG   Seriola dumerili (greater amberjack): 111217494
Entry
111217494         CDS       T05606                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu03266  Virion - Herpesvirus
sdu04081  Hormone signaling
sdu04145  Phagosome
sdu04148  Efferocytosis
sdu04510  Focal adhesion
sdu04512  ECM-receptor interaction
sdu04810  Regulation of actin cytoskeleton
sdu04820  Cytoskeleton in muscle cells
sdu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    111217494
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    111217494
   04512 ECM-receptor interaction
    111217494
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111217494
   04148 Efferocytosis
    111217494
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111217494
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111217494
   04810 Regulation of actin cytoskeleton
    111217494
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111217494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdu04131]
    111217494
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdu04147]
    111217494
   04515 Cell adhesion molecules [BR:sdu04515]
    111217494
   04090 CD molecules [BR:sdu04090]
    111217494
Membrane trafficking [BR:sdu04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    111217494
Exosome [BR:sdu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111217494
Cell adhesion molecules [BR:sdu04515]
 Integrins
  Integrin beta subunits
   111217494
CD molecules [BR:sdu04090]
 Proteins
  111217494
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt I-EGF_1 EGF_integrin PSI_integrin EGF_2 EGF_Teneurin EGF_TEN
Other DBs
NCBI-GeneID: 111217494
NCBI-ProteinID: XP_022595112
UniProt: A0A3B4VL14
LinkDB
Position
Unknown
AA seq 786 aa
MGTFLNRQVILFLFLLSASQVFGFNICTSRGVTTCRQCLAVHPSCAWCFQEEFGKGGSSV
SRCDLKQNLLEGGCSTTSLEFPSSTMTIEEDVPLSDKASGTADDVIQIKPQRLHMVLRPG
DTKRFTVTVKQVEDYPVDLYYLMDLSFSMKDDLARLQTLGSELAVTMGRTTSNLRMGFGA
FVDKTMSPYMYTYPPEAVTNPCYGLDEKCQAQFGFKHVLQLTDKVARFTEEVEKQDVSRN
RDAPEGGFDAVMQAVVCKEKIGWRPDASHLLVFTTDAKTHTALDGRIAGIVQPNDGKCHL
DNDNIYNKSTVLDYPSLALMTEKMSENNINLIFAVTSFVVPLYKSYSQLIPGTTVGTLSD
DSGNVIQLIEEAYAKIRSNMELELLGVPEELNLSFNATCLNGEVIQGLRSCSGLKIGDTV
SFSVDAQLRGCPKEKSRTFTIKPRGFKDTLEVRVDFACGCDCEAAAEANSPLCNSNGTYE
CGVCQCHQGRLGPRCDCSVEDYSQTDDVNCIPKPGSPICSGKGNCLCGQCSCHTNEYGQV
WGKYCECDDFSCAHFKEALCSNNGKCNCGYCECNAGWKGENCNCTTRTDTCMSSIGLLCS
ARGNCECGVCHCTQPGAYGATCEKCPTCPDSCTIKKACVECQHFKRGQYAEDNSCSRICR
DEIIIVDKLVVHDRNAVNCSYKDENDCVEHFQYYEDESGKSILYVVKEPECPEGPDVLVV
LLAVAGAILLLGLIGLLIWKLLVTIHDRREFAKFEEERAKAKWDTANNPLYKGATSTFTN
IAYRGK
NT seq 2361 nt   +upstreamnt  +downstreamnt
atggggacgtttttaaaccgtcaagtgatcctgtttctcttcttgctgtcggcatcacaa
gttttcggtttcaacatctgcacatcacgaggagtcaccacttgtcgacagtgcttggct
gttcaccccagctgtgcatggtgctttcaggaggaatttggtaaggggggatccagtgtg
tcccgctgcgacctgaagcagaacctgctggaaggagggtgcagtacgacgtctctggag
tttccctccagcacaatgactattgaggaggatgtcccgctcagcgacaaggcctcgggc
acagctgacgatgtcattcagataaaacctcagagacttcacatggtactacgaccaggc
gataccaagcgtttcactgtgacagtgaagcaggtggaggattacccagtggacctctac
tatctgatggatctttccttttcaatgaaggacgacttggctcgccttcagactctgggc
agtgagctcgctgtgaccatgggccgcaccacaagcaacctacgcatggggtttggagcc
tttgtggacaagaccatgtccccttacatgtacacctatcctccagaggcagtcacaaac
ccttgctatggacttgatgaaaaatgccaggctcagttcgggttcaagcacgtgctgcag
ctgacggataaggtagcgcgcttcactgaggaggtggagaaacaggatgtgtctagaaat
agagatgctccagagggtggatttgatgctgtcatgcaggctgtggtgtgcaaggagaaa
attggctggcgcccggatgcctcacacctactggtgttcaccaccgatgccaaaactcac
accgcactggatgggcgtatagcaggcatcgtgcagcccaatgatggaaagtgtcacctt
gataatgacaacatttacaacaaatctactgtgctggactatccctccttggcgctcatg
accgagaaaatgtctgaaaacaacatcaatttaatttttgccgtgaccagctttgtggtg
ccgctctacaagtcgtacagtcagctcatcccgggcacgaccgtggggacgctgtccgat
gactctgggaacgttattcagctcattgaagaggcttatgcgaaaattcgctctaatatg
gagctggagctgctgggagtccccgaggagttgaatctctccttcaatgccacttgcctg
aatggggaggtcatccagggactcaggtcctgctctggcctcaagatcggagacacggtg
tcattcagcgtggacgctcagttgcgtggctgccctaaggagaagagtcgcacttttacc
atcaaacctcgggggttcaaggataccctggaggtcagggtggacttcgcctgcggttgc
gactgtgaggcagcggcagaagccaacagccccctctgtaacagcaacgggacctacgag
tgcggcgtgtgccagtgtcaccagggtcgtctgggccctcgatgcgactgctcagtggag
gactacagccaaaccgacgacgttaactgcatcccgaagccgggcagcccgatctgcagt
ggcaaaggcaactgtttgtgtggacagtgctcctgccatacaaacgaatacggtcaggtg
tggggaaagtactgcgagtgtgacgacttcagctgcgcgcacttcaaagaggcgctctgc
tccaataatgggaagtgtaactgtggctactgcgagtgtaatgccggctggaaaggagaa
aactgcaactgcaccacccgcacagacacctgcatgtccagcatcggcctgctgtgcagc
gcccgcggtaactgtgagtgtggggtttgtcactgcactcagcctggtgcctacggagct
acctgcgagaaatgccccacctgccccgattcctgcaccataaaaaaggcgtgtgtcgag
tgtcagcacttcaagagagggcagtacgccgaagacaacagctgcagtagaatctgcaga
gatgaaattataatcgtggataaactggttgtccatgacagaaatgcagtgaattgctcc
tacaaagatgaaaatgactgcgtggagcacttccagtactacgaagatgaaagtggcaaa
tccattctgtatgtggtgaaagagccagagtgccccgagggcccagacgtcttggtcgtg
ctcctggcggtggctggagccattctgctcctgggccttattggcctgctcatctggaag
ctgctggtcaccatccacgatcgcagagagttcgctaagtttgaggaggagagagccaaa
gccaaatgggacacggctaacaatcctttgtataaaggagccacgtccaccttcaccaac
atagcgtaccgaggcaaataa

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