Seriola dumerili (greater amberjack): 111217574
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Entry
111217574 CDS
T05606
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04514
Cell adhesion molecule (CAM) interaction
sdu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111217574 (lrrc4b)
04517 IgSF CAM signaling
111217574 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111217574 (lrrc4b)
Cell adhesion molecules [BR:
sdu04515
]
Immunoglobulin superfamily
NGL family
111217574 (lrrc4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
111217574
NCBI-ProteinID:
XP_022595229
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EQVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGDEDSALISINETFIRVHPGP
TPSGHLWPEGVSTTASSLSAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QSGSSGIGGGQSLRLHHPEMVNLPNLARSDHLNHYYKTHHFNNMMGLGMGTGPGVGLNNN
NNPSPCSQSQNTSISCSQVPTSTSGGTPTGGTLPSPVPLPQLGLHSSLKGLMGKGQNEPL
LFKSGSKENVQETQI
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagttggtgggagccgcctcctcctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcagaacctg
gagcaggtgccggagagcatatcagtcaacacgcgatacctcaacctgcaggagaactca
atacaggtcatcaagtctgacaccttcaagcacttgaggcacctcgagattctccaactc
tccaagaatcagatccgtcagattgaagtcggagcattcaatggcctccccaacctcaac
acactggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctgcgggagctgtggctgcgcaacaaccccattgagactttgccaggctatgcc
ttccaccgcgtgccctcgctacgtcgcctggacctgggtgaactcaagaagttggatttc
atctccgacgcagccttcgtgggcctcatcaatctacggtacctgaacctgggcatgtgt
ggactgaaggacattcccaaactgacagcccttgtgcgtttggaagagctagagctgtca
ggaaaccggctggagatcatccgacctggttcctttcagggcttggtgtccctccgcaag
ctgtggctcatgcactcacaggtgtccgtcattgagcgcaatgctttcgatgacctgaaa
aacctggaagagctcaacctgtcccataactccctgcactctttgccccatgacctcttc
acaccccttcaccagctggagagggtacacctcaaccacaacccctgggtctgcaactgt
gatgtgctttggcttagctggtggttgaaagagacagtacccagcaacaccacctgctgt
gcccgctgccacgctcccccattcttaaagggcaagtacattggagagcttgaccagagc
cacttcacctgctatgcgcctgtcattgtggagccacctacagacctcaacgtcactgaa
ggtatggctgctgagctgaagtgtcgcacgagcacctccacaacttctgtcaactggatc
acccctaatggcaccctaatgacccacggttcttaccgggtgcggatatctgtcctgcat
gatggcacgctcaacttcacgaacgtcaccctgcgggacacaggccagtacacctgcatg
gtcaccaacgctgctggcaataccacggcaactgcagtcctcaatgtcactgctgctgat
gctagtgttaactacacctactttacaacagtcaccgtggaaacagtggagactccagga
gatgaagattctgcactgatttccatcaatgaaaccttcatccgggttcatcctggcccg
actccctcgggccacttgtggccggaaggtgtttccactacagcctcctctctgtcagcc
ggctggtcctcctcctctcctcgagccacccgccccaccttcactgtgcccatcactgag
ccaggcttctcaggcctagatgatgtgatgaagaccaccaagatcatcattggctgcttc
gtagccattaccttcatggcagcggtgatgctggtggtgttctacaagctgaggaagcag
caccagctgcacaaacaccacggccccgctcgcgccatcgagatcatcaatgtggaggat
gagctgggggccggggccagtggtcgaggcagtggcatctcaggagggtccaccgtgacg
cagagcggcagcagtggaataggagggggccagagtctcaggctgcaccacccagagatg
gtcaacctgccaaacctggctcgatcagaccacctcaaccactactacaaaacccatcac
ttcaacaatatgatgggcctgggcatgggcacaggtcctggtgtgggcctcaacaacaac
aacaacccctcgccttgctctcagtctcagaacacatccatatcctgttcccaggttcca
acctccaccagtgggggaacacccacaggtggcaccctgccctcccctgtgcccctgccc
cagttgggcctgcacagttctctgaaaggcctaatggggaaaggccagaacgagccactg
ctctttaagagcggctccaaagaaaatgtgcaagagactcaaatctga
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