Seriola dumerili (greater amberjack): 111217607
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Entry
111217607 CDS
T05606
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
sdu
Seriola dumerili (greater amberjack)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
111217607
NCBI-ProteinID:
XP_022595276
LinkDB
All DBs
Position
Unknown
AA seq
2451 aa
AA seq
DB search
MTMPFSPLSSDEEQQRMLGNNRHLYPGAEDEEEEEEEEEEEMEEDERDEDGEEEENGELE
GEEEDDEEEMVEEVRRGGLSRGGRGEVHRQSGKLAGRPSGDRQIRPGNPVHTTNPYSSNP
APTHQQPANQIQQQQQRRLKERSASSVPSEDAHIAMMVFRIGIPDIKQTKCLRFNPDATV
WKAKQQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERLLREYPQSFEKGVPYLEFRY
KTRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMAKFIDKGLDPNYQDADTGETA
LSLAVQCEPGGGEAIRVLVEGGAHIDFRAKDGLTPLHKAVRGHRHTALLVLLSLGASPDY
KDRRGLTPLYHTVLTGGDTSCCETLLYHRAKLGIRDENGWDETHQACQNGNSQHLEHLLF
YGADSSSQNASGNTALHICALYNKESCARILLYRGANKDTKNNSGQTPFQVAVMSGHFEL
GEIIKNHRDTDVVPFVESPKYAPQRRESGRTLTIPHPHPFLRANSDSSMNLPDWMAVPNA
PGTNIVSVQGYKHTGTLRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQGPAPATTTVQT
AGQRRRLYSAVPGRVFVATRAHSAQGEREISFNKGDRVKVLSVGEGGYWEGTVRGRTGWF
PSDCVEEVMLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSE
GFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVK
VGHRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLSTPAIALRSKSMTSE
LEEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTISTNEAPGTRGQ
GPKRDRGRSFYGNEPNYADQSGMGMMSSGLGLGYDRGQYTSGHGPQHGMLRQKSIGVPEE
EKQFLHPPTMKFARSLSVPGPDDIPPPPTTAPPDPPFSSAPPLGWRAKSSQQPSVSVSQS
TSTSAHYQPYSQSVHFTHGGRERAGGTAAGPGAVDHTTSYAHAAAHTAQSRTASRKVAYT
GEAVGAGGGAKAAGLRRGYSTAVPPSSIATVMPQQQQTTQSQPQRADRGAAGAGAGGPKG
GARRGKGPLVKQSKVEDLRMGQGTLGGKGSVEKSSIPIPTIIVKAPSTSSSGRSSQGSSV
EADAPASGEADEAKTPHGPPPSTPAPQPPAPPSIPAPPPPSLPSIRAQENLDFTSQFGAA
IVGAARRDRERFHEARRKSASLFMSAEEDVSLGDGVGGVTRTQVSQQQLSTQAESSSTRL
RPSKSIDEGMFSGDTFIHHTRSMPPAFGLPEYSSSALDYQPKSVPTDLYTAAGRQAAPST
TTTFIHPLTGKALDPTSPLGLALAARERALRDDTRLRRGTEHHFTRQMSSVVFPSSTVTS
QPVSSAAQSSSSSYLVTSSSLAATTPTVGRPPSPRILRGVGSGWGEEGGGGEREREGGGA
REGLRVRFSEDKTVHTHHYQSQPYQPTYKERERERSRERERELSRERERDKEREGYMRRA
EQAADSSAQQAAQSQPPRRPSFLRMESQADAYILSLTPPSPPPTSSQQTGSATGSAGSGL
MVLPPPAPSVDADDEFVYADPLPPPLEFANSFDRGIGAISGYAQHGMLPNSLTSRQQQVP
PPPPPPPPPPPPPQKEPFVSGFPAHTPLPSPQAGDSTASSLTSYDSEVANLTQSAPSPSQ
TSPNPPPPHSPSTLQPTSIAGPPPPPSVSPPPPPGSYHRPFSMSHPHHLYNSTHTPGRSS
PTPPPHTVAPPPAYRGPPAPSSTAATSAPLRGTASQATTASCAAITTTAATTTSTSTQLY
HERTHTAHTTSSTAITGSRRTGEHHRHPPATKKGESQETVVDSGIEELDSRSSSDHHLDS
ILALSGAGVRGDRLDRGDRGVGAGGRMGGGGGTVESERAGDFLESYMSYLDGQTFEMQNA
TAAASTYPKTSRFRDGGRAGDLHRQTSTAPASFHSHRRRDEQDDDDGEEGVTEDESGQDG
YGVRDMQNLGRPTSPYFDRPRTPEMKPLWGEGQMSGDGQSGTLLEGKKIYPPASSMKPSI
INELSSKLQQRSKDSWSSQRPLSRHRFSEDSASALSPPSARSQSPSPISLSQPSLSPSPT
PTSQYPNWGRSSSPQPSAGSQPPRSHSPLSPTSYSPYPTSPKHRPVYRTKALEFQFIPSR
ESRKAESHMLQRRRAPSPLISPSERPKLGPPRPSSLPLLPTTPLYSAIYDLRGSITPPSP
GNPLGDPYFSPSPPLFAPSGAPPPPNSTLVVSRSLSPTHFLSGTSSPPLHPLPPPPCLSY
PHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNEIDGTHLPSLTKEDYL
DLGVTRVGHRMNIERALRSVMDRLSSSPFPISVLSPRDGQTERRRDDGSRS
NT seq
7356 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccattcagccccctgtccagcgacgaggagcaacaaaggatgctgggaaac
aatcgacacctctatccaggggcagaggacgaggaagaagaggaggaggaagaggaggag
gaaatggaagaagatgagcgtgatgaggatggggaggaggaggagaatggcgagctggag
ggggaggaggaagatgatgaggaggagatggtggaggaggtcaggcgaggaggcctgtca
agggggggcagaggtgaagtacacaggcagtcaggtaaactggccggacgacccagcggg
gacagacagatccggccagggaaccctgtgcacaccactaacccctattcatccaacccc
gcacccacacaccaacagccagccaatcagatacagcagcagcagcagaggaggctgaag
gagcgcagcgccagctcggtgccatctgaggacgcccacatcgccatgatggtgtttcgt
attgggattccagacataaagcaaacgaaatgtttgcggtttaacccggatgccacagtg
tggaaggccaagcagcaggtgctgtgctcccttaccgaatccctgcgggacgtcctgaac
tatggtctgttccagccggccaccgacggccacgatgccaagttcttggaagaggagaga
ctgctcagagagtacccacagtcctttgagaaaggggtaccatatttggagtttcgatac
aagaccagggtgtacaaacagaccaatctggatgagaagcaactggccaaactgcacact
aaggccagcctgaagaaattcatggattatattcaaaccagcgctgtggacaagatggcc
aagttcatagacaagggcctggatcccaactaccaggacgctgacaccggcgagactgct
ctgtccctggcggtgcagtgtgagccgggtggaggtgaggccatccgggtccttgtggag
ggaggggctcatattgacttccgcgccaaagatggactcacaccgctacacaaggctgtt
cggggtcaccgccatacagccctgctggtcctgctgtctctgggtgcgtctccggactat
aaggaccggcgagggctgacgccgctctaccacactgtgctgacagggggcgacacctcc
tgctgcgaaacactgctttaccaccgcgccaagctgggcatcagggatgagaacggctgg
gatgagacacatcaggcctgtcagaatggtaactcgcagcatctggagcacctcctcttc
tatggggcggattcctcctcccagaatgcctctggaaacactgccttgcacatctgtgct
ttatacaacaaggaaagctgtgcacgaatcctgctctaccggggagcaaataaagatacg
aagaataacagcgggcagaccccctttcaggtggctgtcatgtctggccattttgagctg
ggagaaattatcaaaaaccaccgggatacggacgtggttcccttcgtggagtctccaaag
tacgccccacagagacgggagagcggcaggacgctgacaattccccaccctcatcccttc
ctgcgggccaacagtgacagcagcatgaacctgccagactggatggcagtgcccaacgcg
ccggggaccaacatcgtctctgtgcagggctataaacatactggtacactgcggagctcc
agcagtcccaggggggcgaggacacgctccccgtcccgagggaggatcggggacaaggag
gaccgaagcaggcagagtcggagacaggggcctgccccagccaccaccaccgtacaaact
gcggggcagcgcagacgcctctacagcgcagtcccaggacgagtctttgtagctactcga
gcacactctgcacagggagagcgagaaattagcttcaataaaggagacagggtcaaagtg
ttgagcgttggcgagggcggttactgggaggggacagtcaggggtcgcacaggctggttc
ccctccgactgtgtggaggaagtgatgcttcgaagccaagacaaccgatcagagagccgc
ggagaacgagccaaaaggctgttccgccattacacggtgggatcctacgacagctttgat
gctcccagtgactacataatcaaggagaagacagtgcttctgcagaaaaaggacagcgag
ggttttggctttgtgctgcgaggagccaaagctcagactcctatcgaggagtttactccc
accccagccttccctgccctgcagtacctggagtcagtggacgagggcggcgtggcctgg
agagctggactcaggatgggggatttcctgatagaggtcaacggtcagaacgtggtgaaa
gtcggacaccggcaggtcgtcaacatgatccggcaaggtggcaacagcctcatggtcaag
gttgtcatggttacccgcaaccccgacatggaggagggttcgaggaagaagattccccag
cagagtaagaggctgagcactccggccatcgccctgcgatccaaatccatgacttcagag
ctggaggagatggtggagagagctgctacgccttggaaaaaaaaatcagaattcgaatcc
tcacaagttacggagaagaagaggacggtctatcagatggctttgaataaactagatgaa
attcttgcagcagctcagcagacaatcagcaccaatgaggcgccggggacacggggacag
gggccaaaaagagacagggggcgaagtttctatggcaatgagccaaattatgcggatcag
tccgggatggggatgatgtcatcggggttgggccttggctatgaccgcggacagtacacc
tcaggtcacggcccacagcacggtatgctgcggcagaaatccatcggggtgcctgaggag
gagaagcagttcctgcatcctccaaccatgaagtttgcacgcagtctgtcggtgcccggc
ccagacgacatcccccctcctcccaccactgcgccaccagaccctccgttctcctctgct
ccgccgctaggttggagagctaagtcatctcagcagccctctgtctccgtgtcccagtcc
acatccacctccgcgcactaccagccctactcccagtcagtgcacttcacccatgggggc
agggagagggcaggaggtaccgctgctggccccggtgcggtggaccacaccacctcgtat
gcacacgcagctgcccacacggctcaaagcaggactgcttcgcggaaggttgcttacact
ggggaggctgttggagctggtggaggggcaaaggcagcgggtcttaggagaggctacagc
accgccgtccccccatccagcattgccactgtaatgccccagcaacaacagactacccag
agtcaaccccagcgagcagaccgcggtgcagctggggctggggcagggggtcctaaagga
ggggcccgcagaggtaagggccccctggtgaagcaatccaaggtagaggacctgcgcatg
ggccaaggtacactcgggggcaaaggctcggttgagaaaagctccatccccatccccacc
ataatagtcaaggctccttcaaccagcagcagtggacgcagcagccagggcagcagcgtg
gaggccgatgctcctgcatcaggggaggcagacgaagccaaaacaccccacggccctcct
ccctccactcccgctccacagccgcctgctccgccttccatcccagcaccaccacctcca
tccttgccttctatccgagcccaggaaaacctggactttaccagccagttcggggctgcc
attgttggcgcagctcgccgagacagggagcggtttcacgaagcccgcagaaagagcgcc
tccttgttcatgtctgctgaggaggacgtgagtcttggggatggagtaggaggagtaaca
aggactcaggtgtcgcagcaacagctcagcacacaggctgaaagttcatcgacacggctg
cgcccgtccaagtctattgacgagggcatgttctctggggacacctttatccatcacacc
cgcagtatgcctccagcctttggtctacctgagtactcctcatctgccctggactatcag
cctaagtctgtgcctactgacttgtacacagcagcaggcaggcaggcagcaccctccact
accaccacctttattcaccctctaacaggaaaggcccttgaccccacatcgccactcggc
ctcgccctggccgccagagagcgtgctctgcgggacgataccaggttgaggaggggaaca
gagcaccatttcacccgccagatgtcgagtgtggtgtttccttcatctactgtcacgtct
cagccggtgtcatctgccgctcagtcctccagctcctcctacctggtcacgtcgtcttct
ctggccgccactacacccaccgtcggccgcccaccctcacccagaatcctcagaggagtt
gggagcgggtggggtgaggagggcggtggaggagagagggagcgggaaggaggcggggct
cgcgaggggctaagagttcgcttctctgaggacaaaacggtccacacgcaccactaccag
tctcagccgtatcaaccgacctacaaggagagggagcgggagaggtcgagggagcgggag
agggagctgtccagggaaagagagagagacaaagagagagagggttacatgaggagggca
gagcaggctgctgacagctctgctcagcaggcggctcagtctcagccgcctcggaggccg
tctttcctcaggatggaaagtcaagccgacgcctatatcctgtccctcacccctccctct
cctccacctaccagctctcagcagacagggagcgctaccgggagcgctggttctggcctg
atggttctccctccacctgccccctcggtcgatgcggacgatgagtttgtctacgcagac
cccctcccgcctccgttagagtttgccaacagcttcgacaggggaataggggcgatatca
gggtacgcacaacacgggatgctccctaacagcctgacctcccgccaacagcaggttcca
ccccctccacctcctccccctcctcccccaccacccccccaaaaagaaccatttgtaagt
gggttccctgctcacacacccctgccctcgcctcaggcaggggactccaccgcctccagc
ctcacgtcttacgacagcgaggtggctaacctgactcagtctgctccctccccctcccaa
acgtcacccaatcccccaccgcctcactcaccctccaccctgcagcccacctcaatagcg
ggacctcctcctcccccgtcagtctcaccgccgccccctcccggatcctaccacagaccc
ttctctatgtcccacccccaccacctttacaacagcactcacactcctgggcgctcctct
cccacgcctcccccgcacacagtcgcgcctcccccggcctaccgtggtcccccagcgccc
tcctccactgctgccacctctgctccgctcaggggcactgcctcccaagccacgaccgct
agctgtgccgctataaccaccactgctgccaccacaacaagcacctccactcagctctac
cacgagcgaacacataccgcacatacaacatcctccaccgccatcacgggcagtcgcagg
acaggggagcaccaccgccatccccctgctaccaagaaaggagagtcccaggagacagtg
gtggactctgggattgaagagctggacagccgcagcagcagcgaccaccacctggacagc
atcctggctctaagtggagccggggtccgaggtgacaggctggaccgaggggacagagga
gttggagctggaggacgtatgggagggggaggtgggacagtggaatcggaaagggcggga
gattttctggagtcttacatgagctacctggacggacaaacttttgagatgcagaacgcc
acagcggcagcctccacctacccaaaaaccagcaggttcagagacgggggccgcgccggg
gatctacacagacagaccagtaccgctcctgcatccttccactcccacagaagaagagat
gagcaggacgacgacgacggcgaggagggagtgacagaggacgaaagtggccaggacggg
tacggggtgagggacatgcagaatttgggacgtcccacttcaccatacttcgatcggcca
cgcactcctgagatgaagcccctctggggcgaggggcaaatgagtggcgatggtcagtct
gggactcttttagaggggaagaagatctacccacctgcatccagtatgaagcccagcatc
attaatgagctgagcagcaaactgcagcagaggagcaaagacagctggagcagccagaga
ccactgagcagacacagattctcagaagactcagcctcagctctgagccccccctcagct
cgatcccagtccccgtctccaatctcgttatcacagccatcgctgtccccgtcccccaca
ccaacctcccagtaccctaactggggacggtcctcatctcctcagccttcagctggctct
cagcctccgcgatcacattccccgctgtccccgacatcttattccccttaccccacctcc
cccaaacacagacctgtctaccggaccaaagccctagaatttcagttcatccctagtcgc
gagtcccgcaaagcagagtcacacatgctccagcgtcggcgagcaccgagccccctcatc
tccccgtcagagaggcccaagctgggcccaccacgtccatcatcccttccgctcctcccc
accacacccctatacagcgccatctacgacctccgaggttcaatcaccccgccgtcacct
gggaacccccttggcgatccttacttctctccctctcctcccctgttcgccccctctggt
gcccctcctcctccaaactccactttagttgtttcacgatccctctctccaacacacttc
ctatctgggacctcttctccacccctgcatcctctccctccacccccctgcttgagctac
ccccatctaccgcccccttcccctacgaagccgtttgcctccaagccgctgccctattgg
accaagtatgacgttgcagactggctaggatacctgaatctgggtgagcacagagagcgt
ttcctggacaacgagattgacggcacccacctgccctccctgaccaaggaagactatctg
gacttgggcgtgacacgtgtgggccaccgcatgaacatagaacgggccctgaggagcgta
atggacaggctgtccagcagcccatttcccatttctgttctctcacctcgggatggacag
actgagaggaggagggacgacgggagtcggagctga
DBGET
integrated database retrieval system
