Seriola dumerili (greater amberjack): 111217756
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Entry
111217756 CDS
T05606
Name
(RefSeq) DDB1- and CUL4-associated factor 7
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111217756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111217756
03036 Chromosome and associated proteins [BR:
sdu03036
]
111217756
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111217756
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
111217756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
MIOS_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR41
WD_LRWD1
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
111217756
NCBI-ProteinID:
XP_022595462
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLEEESSEFV
CRNTFDHPYPTTKIMWIPDTKGVYPDLLATSGDYLRIWRVSDTETRLECLLNNNKNSDFC
APLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDI
AFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATM
AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMP
RAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcacggcaaaagaaaagaaatctacaaatacgaggcgccatggacggtttat
gcgatgaactggagcgtccgtcccgacaaacgctttcggctggcacttgggagctttgtg
gaggaatacaacaacaaggttcagctggtgggtctggaggaggagagctcagagtttgtc
tgcaggaacacatttgatcacccttaccccaccaccaagatcatgtggatccctgacacc
aagggggtttacccggacctgctggccaccagtggagactacctgcgcatttggagggtc
agcgacacagaaacacgtcttgaatgtttgctgaacaacaacaagaactcagacttctgt
gcgcccctcacctcctttgactggaatgaagttgatcccaatctgctgggaacttccagc
attgacacaacctgcactatctgggggctggagaccggtcaggtgctaggacgagttaac
ctggtctctggacatgtgaaaacccagctgatcgctcatgacaaagaggtgtatgacatt
gcattcagccgtgcaggaggtggtagagatatgtttgcctctgtgggagctgatgggtcc
gtccgcatgtttgacctccggcacctggaacacagcacaatcatctatgaagacccgcag
caccacccgctgctccgcctctgctggaacaagcaggaccctaattacctggccacaatg
gccatggacggcatggaggtcgtcatcctggatgtacgtgtaccttgcacaccagtggct
cggctgaacaaccatcgcgcctgtgttaatggcatcgcctgggccccccactcctcatgt
cacatctgcactgcagccgacgaccaccaggcgctgatatgggacatccagcagatgcca
cgggccattgaagatcccatcctggcctacaccgctgaaggggagattaacaatgtgcag
tgggcgtccacacagccggactggatcgccatctgctacaataactgcctggagatcctg
cgtgtctaa
DBGET
integrated database retrieval system
