Seriola dumerili (greater amberjack): 111217826
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Entry
111217826 CDS
T05606
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111217826
03041 Spliceosome [BR:
sdu03041
]
111217826
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111217826
Spliceosome [BR:
sdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111217826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
111217826
NCBI-ProteinID:
XP_022595529
UniProt:
A0A3B4VRW5
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQMPQQNTVSFAAQP
YSQWGQWYSNTQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNGGMV
EPGQGVNGTMLTNQAGMSTAGYHTH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagcccaaaaccctgtatgtggggaatctgtcccgggacgtaacagag
gccctcatcttggagttgtttggccagattggaccctgcaagagctgtaaaatgatagta
gatacagcaggtcatgatccgtactgctttgtggagttctatgagcatagacatgccact
gccacaatcgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacgacgccaaccagccaaaagaaagacacaagcagtcacttccatgtctttgttgga
gatctaagtcctgaaatcaccacagatgacataaaagcagcttttgctccatttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcagagaacgccatacagcagatgggaggacagtgg
ttgggaggcaggcagatcaggactaactgggccacgaggaagcctgctcctaaaactacg
aatgagacgaccaacaccaagcagctgtcttttgatgaggtggtgaaccagtccagcccc
agcaactgcaccgtctactgtggaggagtcacaacaggtctcacagagcaaattatgaga
cagaccttctcacctttcggccaaataatggaaatccgtgttttcccagacaaaggctac
tcatttgtgagattcaactcccacgaagcggcagctcatgccatcgtttctgtgaacggc
acatccatagagggctatgttgtcaagtgttactggggcaaagaaacaacagacatggtt
agccccattcagcaggtacagatgccacagcagaacacggtgagcttcgcagcgcagccc
tacagtcagtggggtcagtggtacagcaacacgcagcagattggtcagtatgtgcccaat
ggatggcaggtgccgagctatggagtctacggacagacctgggatcagcagggctacaat
catttacatgccggtgccggatggacaggagtgggcgccgtgagcaacggagggatggtg
gagcccgggcagggagtcaacgggacgatgctaaccaaccaggctggcatgagcaccgcc
ggctaccacacccactga
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