Seriola dumerili (greater amberjack): 111217931
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Entry
111217931 CDS
T05606
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111217931 (smarce1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111217931 (smarce1)
03036 Chromosome and associated proteins [BR:
sdu03036
]
111217931 (smarce1)
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111217931 (smarce1)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111217931 (smarce1)
PBAF complex
111217931 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Pcf11_helical
Motif
Other DBs
NCBI-GeneID:
111217931
NCBI-ProteinID:
XP_022595696
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMPNTTGFVGYNPYSHLAYNNYRLGGSQSSNSRVTNSSGINIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYE
AEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAEDPD
DYDDGFSIKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQDKKRKFIEATESFTNELKRLCCMKVEVDMEKISAEIAAAEEAARKRI
AEREKDAGERGAREAPTCVLAEEEKHICATHGNKSLQNSLSESSNKEGEDAESNTTDAPG
KPKAPEEVEAHPGSEEGASEDKESVPEGAMEEGTSDSNTGSETTSAQTEDAPTSEPSEGP
SRARAAH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaccatcctatgcccctccccctccccctgctcctacaactcaaatgccc
aacactaccgggtttgtggggtacaacccatacagccatctggcctacaacaactacaga
ctgggcgggagccaaagcagcaacagtcgggtaacgaattcttctggaataaatatccca
aagccgcccaagccacctgataagccattgatgccatatatgagatatagtcgtaaggtt
tgggatcaagtaaaagcctccaatcctgatctgaagctatgggaaattgggaagataatc
ggtggcatgtggagggacctcactgatgaggagaaacaggattatttgaatgactacgaa
gcagagaagattgagtataatgagagcatgaaggcctatcacaactcgccagcctacctg
gcctacgtcaatgcaaaaagccgtgctgaggcagctctggaagaggagagccgccagagg
cagtccagactggacaagggcgagccttacatgagtattcagccagcagaggatccagat
gattacgatgatgggttttccataaagcactcagctgcagctcgtttccaacgcaaccac
cgtctgatcagtgagattctcagtgagagtgtagtcccagatgtgcggtcagttgttacc
actgctcgcatgcaagtcctcaaacgccaggtccagtctttgatggtacaccagagaaag
ctggaggcagagttgcttcagattgaagaccgccaccaggacaagaaaagaaaattcatc
gaagccacagagtcgttcacaaatgagctcaaaaggctgtgctgtatgaaggtggaagtg
gacatggagaagatctctgcagagattgctgcagcagaggaggcagcccgcaaacggatt
gcagaacgtgagaaggatgcaggagagcgaggtgcaagagaggcccccacctgtgtctta
gcagaggaagaaaaacacatttgtgcaacacatggcaacaagtccctgcaaaattctctc
agtgaaagtagcaacaaggagggtgaggacgcagaatcaaacaccacagatgcaccaggg
aagccaaaggccccagaggaggttgaggctcatccaggcagtgaggaaggggcgtcagag
gacaaggagagtgtcccagagggagccatggaggagggaaccagtgacagtaacactggc
tcagagaccacctctgctcaaacagaagatgccccaactagtgagccatcagaggggccc
agcagggcaagagcagcccactga
DBGET
integrated database retrieval system
