Seriola dumerili (greater amberjack): 111217981
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Entry
111217981 CDS
T05606
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111217981
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111217981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF4621
DUF4832
Motif
Other DBs
NCBI-GeneID:
111217981
NCBI-ProteinID:
XP_022595776
UniProt:
A0A3B4T529
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MIWLIFLLSILDGAVSQLHYSVPEEQEPGSVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALVVKEKIDREEICKQTIPCLLHLEVFLENPLELFRVEIEVMDINDNPPSF
PETDISVEISESAIPGTRFPVENAFDPDVGTNALSTYAITTNNYFYLDVQTQSDGNKFAE
LVLEKPLDREQQAVHRYVLTAVDGGIPQRTGTALLVVKVLDSNDNAPTFDQSVYTVNLRE
NSPVGTLVIQLNATDVDEGQNGEIVYSFSSHNAPRIKDLFNIDARTGRIEVAGEVDYEES
NTHQIYVQAKDLGANAVPAHCKVLVKLVDVNDNTPEIGFSTVTESVSEQDAPGTVLALFS
VSDRDSGENGQMSCEILGDVPFKLKSSFKNYYTIVTDGPLDRENTDSYTITVVAKDKGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVSALDPDIGQNALITYS
ILECDIQGMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGAAELFSNATVNV
IIVDQNDNAPTVIAPIGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGENARLSYSILRGN
EMEMFRMDWRTGELRTARRISPKRDLQGYYDLLIEVRDHGQPPLSSSASVSVILVDSVVE
GRSGDRGSASKAKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKTLNLYTCLLAG
DCCLCCSSCCSRQARGRKQKKLSKSDIMLVQSTNVTSGVGPVGQVPVEESGVGGVGGGFG
SHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHTNPCGAIVTGYSDQQPDII
SNGSILSNETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNR
GHSAGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDATLPDTEVP
SSVNLSEQLTMTSSTTSSNDRSFSTFGKDGQRSQSHHSLHHHLHQQQQQYSSSTLERKEY
DRGTLPYKPTFLCEYQYESSLGPYDFGLVQYRY
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgatttggttaatattcctgctctccatcctggatggagctgtctcacagctacattac
tccgtgccagaggagcaggaacctggctctgtggttgggaatattgcagaggatttgggg
ctggacattaccaaactttccgctcgccgctttcagacggtgcctagttcacggacacct
tatctggaggtgaacttagaaaacggtgcgctcgtggtgaaggagaaaattgaccgggaa
gaaatctgtaagcagaccatcccatgcctattgcacctggaggtgtttctggagaacccg
ctggagctctttcgcgtggagattgaggtgatggatatcaacgacaatccacccagcttt
cccgagacagacatttccgtggagatatcggagagcgccatccccgggacccgtttcccg
gtggagaacgccttcgaccctgacgtgggcacaaacgcgctcagcacatatgccataacg
actaataactatttttaccttgacgtgcagacacagagcgacgggaacaagtttgcagag
ctggtgctggagaagccgctggacagggagcagcaggcggtgcaccgctatgtgctgacg
gctgtggatgggggcatcccgcagcggaccgggacggctctcctggtcgttaaagttctg
gactctaatgataacgcgcccacgtttgaccagtctgtgtacactgttaacctgcgggaa
aactcccccgtgggcactctggtcattcagctcaacgccacggatgttgacgagggacaa
aacggggaaatagtttattctttcagcagccacaacgctccgcggataaaggacttattc
aacattgatgccagaacaggtaggatcgaggtggcgggggaggtggactatgaagagagc
aacacgcaccagatttatgtccaggctaaagatctgggggccaatgcggtccctgcgcat
tgcaaagtgctggtcaaactcgtggacgtgaacgacaacacgccagagatcggtttcagc
actgtgaccgagtccgtgagcgagcaggacgccccgggcaccgtgctcgcactgttcagc
gtctcagaccgggactccggcgaaaacggacaaatgagctgcgagatattaggagacgtt
cctttcaagctgaaatcctcttttaaaaactactacaccatcgtcacggacggaccgctg
gacagagagaacacagactcgtacaccatcactgtggtggccaaagacaagggtcagccc
tcactcgccaccagcaagtccattaaagtgcacgtctccgatgagaatgacaatgcgccc
cgttttacgcaggctgtttatgatgtgtatgtaactgagaataatgtgcctggtgctttc
attcacgctgtgagcgcgttggaccctgatataggacaaaacgctcttattacctactcc
atattggagtgtgacatacagggcatgtctgtggacacgtatgtgtccataaaccaggac
accggctacctttacgcgctgcgctcttttgattacgagcagctgaaggagtttagcttc
atggttcaggctaaggactcgggtgctgccgagctcttctctaatgccactgtaaacgtg
atcatagttgaccaaaatgataacgctcccactgtgatagcccccatcggtaaaaacggc
accgccaaagagcacttgccgcgctctgcggagcccggatacctggtgacgcgcattgtg
gccatggatgcggatgatggcgagaacgcacggctgtcctacagcatcctgcggggcaac
gagatggagatgttccgcatggactggaggacaggagagctaaggacagcccgcaggatc
tctcccaagcgggacctgcagggctactacgacctgctgatcgaagttagggaccacggg
cagcccccgctctcctcctccgccagtgtgagtgtaatattagtggacagtgtggtcgaa
ggccgcagcggggatcgcggctcggcctccaaggcaaaggagacctcccttgacctcacc
ctcattctcatcatcgccctgggctccgtttctttcatcttcctcctggccatgattgtg
ctggccgtgcgctgccaaaaggacaagacgctcaacctgtacacgtgcctgctggccggt
gactgctgcctgtgctgcagctcgtgctgcagcaggcaggctcgcggccggaaacagaag
aagctgagtaaatccgacatcatgttagttcagagcaccaacgtgacatcaggggtcggg
ccagtggggcaggtgcccgtggaggagtctggtgtgggcggcgtgggagggggcttcggt
tcccaccaccaccagaaccagaactcctactgctaccaggtgtgtctgacaccggagtcc
gccaaaacggatctcatgttcctcaaaccgtgcagcccctcccgcagcactgacacggat
cacaccaacccctgcggcgccatcgtcacgggttacagtgaccaacaaccggacatcata
tccaatggcagtattctctctaatgagacgaaacaccaacgagcagaactcagctatctg
gtggacagacccagacgtgtcaacagctcggcattccaagaagcagacatcgtcagctcc
aaagacagtggtcacggtgacagcgagcagggcgacagtgaccacgatgccaccaaccgg
ggtcattccgctggtgccgacctgttctccaactgcacggaggagtgcaaggccctgggc
cactctgatcgctgctggatgccgtcgttcgtgccgtccgacgggcgccaggggccggac
taccgaagcaacctgcatgtccccggcatggacgccacgctgcccgacactgaggtaccc
tcgtctgtcaacctctccgagcagctcaccatgacctcgtccaccacctcgtccaacgat
aggtcattctccacctttggcaaggacggtcaaaggtcacagtcacaccacagccttcac
catcacctccatcagcaacagcagcagtacagctccagcacgctagagaggaaagagtat
gatagggggaccctaccgtacaaacccacctttctctgtgagtatcagtatgaaagttcc
ctgggaccttatgactttggtctggtccagtacagatactaa
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