Seriola dumerili (greater amberjack): 111217999
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Entry
111217999 CDS
T05606
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111217999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111217999
Membrane trafficking [BR:
sdu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111217999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
111217999
NCBI-ProteinID:
XP_022595842
LinkDB
All DBs
Position
Unknown
AA seq
1605 aa
AA seq
DB search
MTTNDNQDACSIVSDYDCPGVEVGGSVEDLLGFSPSLRASEYFKDLEGGIPASQSTASTV
TTVPESKTLTVDQQVSLNTDPPAINLPLQTSLTALSPQVNAPSPPYYIQPAEEPLHSFVV
TQLSPKLLPGCLIDSGVSSDPSTELSLTINLNGLLGSVETAKGIMGSEAVKEETTMDFDG
EPDEDSFPILVRSMSTSRRHSWGVPVSPIDLRRRLSLDTTAMDSDGEREDDEESHQQTYS
CTACPEDETDGPGMRFPCPRARVTSMADGAPGRHLYSRSEILATDECSRAAHISRVVQTS
KQAARAAGAEEFDPEENLHSTEGQSHIAKQRNNRSDVKESGNVTWYEFLSNENEEEEDRT
EKVEKGTKVKRTLSSLRNRMAGSFNKDKGKNREKEQQKEKWKEKEREAKEKVCSSSRMSS
GHHLVPGAFSSCATCSLCSKSLQKKHGLQCMNCAVNVHKNCKSLLGDCTSSKNKRDFLPK
TSSSGSPNLALKDRDRERDQAGLASSQTLDGHPSFLSTPGMTVSQWGPNTQLTAAHTTYS
SASPASSLGHSLHHHNSSGSLPGEMDETDALRSKRCNEDAISLAPSTTESIIVEDAHYTA
VRADLESDAQDLEAESWSLAVDQQYVKRHSKEMVKRQDVIYELMQTEMHHVRTLKIMLRV
YVRELKENLQMDSGRLDCLFPRLENLLDLHTHFLSCLKERRRENLISPSDRNYTINRVAD
ILITQFSGEIGERMKESYGDFCSHHTEAVSYYKEQLQNNKKFHNIIRKINNLSIVRRLGV
TECILLVTQRITKYPVLVERILHNTEAGTEEHEDLTRALGLIKDTIIKVDTLVNLYEKMS
RLRDIYNKVELKALGKIKDGRVFRREDLAPSRRWLLHEGTVNWKAASGRLKDILAVLLSD
VLLLLQEKDQRYVFATVDSKPSVISLQKLIVREVAHEEKAMFLICASSNEPEMYEIHTTS
KEERNTWMTQIRQAVESCPHTEERLFSEEEEARASRFKEFQERLSQKDTVIVQALTEKLQ
LFADMAESLAGLEDTASRSRLLLRGDASDLQQGETLLKGAITEVENLQNLLQSGVREEAP
ASRLEEGSGSGALPRRADTFGGYDSSPTILSKNGSVRKNSSGESRNRDRSQRASSDPQLK
DLCGSHTLEQTVDESSCSPARWNRIWSNSFPEAEFFDRVVMLSQRLYSLQAIISQQDSYI
ELQRASLTERASLPGRHRGNVLLEQEKQRTLALQREELASFHKLQSQHRQEQQRWEKERE
RHRQQVEATEARLRQREEECKRLEEHLAKEKEELDRQRETYQQDLERLRESTRAVEKEKE
RLEHQKKIKRKTIEVAPLSGSLNGELLMSSGLTSSTSASDLPLPQKPLVRASLSVAPADY
PERPEVMLRRETGSSTLPLKTEVPLHLFSTTNQQHKLVGVQQQIPTKLAAFSSGKGKGGK
SGKASHRTDSTASVDMKQMLKLSGRDENAQKAKRSISPHQQLSLTALHHHTDQLSPPDSA
GTDSQTTSSVSTSLPANIQKPPMPPAQSHPQPSMQTSTMPPHSQSSGFLQFQSHVQPQGL
SPNTQAQVPVNHGLSHSHSHSHSHSMPPPYKIPTEDLNKEDVIFF
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaatgacaaccaggatgcgtgttcaatagtcagtgactacgactgccctggt
gtggaagtgggtggcagcgtggaagacctgctgggcttcagcccctctctcagggcttct
gagtacttcaaagacttggagggagggataccggcttcacagtctactgcatccactgta
accacagtcccagagagcaaaaccctgacggttgaccaacaagtgtctctaaacacagac
cctcctgccatcaaccttcctctacagacttctctgaccgcactctcccctcaggtcaat
gcaccatcaccgccctactatatacagcctgcggaggaacctcttcacagctttgtggtc
actcagcttagtcctaagttattgccaggttgtctcattgacagtggtgtctcctcagac
ccttcaacagagcttagtttgacaataaatctgaatggactgttgggttcagtggaaaca
gcaaaagggataatgggatcagaggcagtaaaggaggaaaccacaatggattttgacgga
gagccagatgaggacagctttcctatcctggtcagatccatgtcaacgtcccgaagacac
agctggggcgtccctgtgtcccccattgacctgcggaggagactgagtctggataccacg
gccatggacagcgatggagagagagaggatgatgaggagagccatcagcagacctacagc
tgcacggcctgccctgaggatgagacggatggtcccgggatgaggttcccctgtcccaga
gccagggtcactagcatggccgatggtgcgcctggcagacatctgtattcccgctcagag
atcctcgccacagatgaatgttcccgagctgcacacatttctcgagttgtgcagacatcc
aaacaggccgcaagggcagcaggagcggaggagttcgacccagaagaaaacctacattct
actgagggacagagccatatagcaaagcagaggaacaacagatcagatgtcaaagaatca
ggaaatgtcacttggtacgagttcctctctaatgagaatgaggaagaggaggatcgtaca
gagaaggtggagaaaggcaccaaggtgaagaggacccttagctctttgaggaacaggatg
gctggctccttcaataaagataagggtaagaaccgagaaaaagagcagcagaaagagaag
tggaaggagaaggagagggaagccaaagagaaagtatgcagcagcagcaggatgagcagt
gggcatcatttggtgccaggcgctttttccagctgtgccacctgctcactgtgcagcaag
tccctgcagaaaaagcatggcctgcagtgcatgaattgtgccgtgaacgttcacaagaac
tgtaagtctctgctgggtgactgcaccagcagcaagaataagagagattttctaccgaag
accagctcatcaggatctcctaaccttgcgctaaaagaccgggacagagagcgggatcag
gcaggccttgcctcatcacagaccctggatggccacccaagttttctcagcaccccaggc
atgaccgttagtcagtggggacctaacactcagctgactgccgcccataccacctactcc
tctgcatcccctgcctccagccttggccacagcctccatcaccacaacagctcaggatcc
ctccctggggagatggatgagacagatgctctccgctccaaacgctgcaatgaagacgcc
atttccctcgctccctccaccaccgagtctatcatcgtagaagatgctcactatacagca
gtgcgggctgatctggagtctgatgcccaggacctggaggcggagtcatggagtttggca
gttgaccagcagtatgttaagaggcactctaaagaaatggtgaagagacaggatgtgata
tatgagctgatgcagacggagatgcaccatgtgcgaacactgaagataatgcttcgtgtc
tacgtccgagagctgaaggagaacctccagatggactcgggcaggctggactgtctgttc
ccccgcttggaaaacctcctcgatcttcacacacatttcctgtcttgtctcaaagagcgg
cgacgagaaaacctcatctcacctagcgacaggaactacaccatcaacagagtggcagat
attctgatcacacagttctcaggtgaaatcggagagaggatgaaggaaagctatggagat
ttctgcagtcaccacactgaggctgtcagctactacaaagaacagctgcaaaacaataaa
aagttccacaacatcatacggaaaatcaacaacctgtccattgtgcggaggttaggagtg
accgagtgtattctgttggtgacgcagcgcattaccaagtaccctgtactagtggagcgt
attctgcacaacactgaagcgggaacagaggagcatgaggatctgactcgagctctgggt
ctgattaaggacaccatcattaaggtggacacgctggttaatctctatgagaagatgtcc
cgactcagagacatatacaacaaggtggagctcaaggcactgggaaaaatcaaagatggc
cgagtgtttcgcagggaggacctggcaccaagcaggagatggctgcttcatgagggcaca
gtcaactggaaagctgcatctggcagactcaaagatattcttgcagttcttctgtcagat
gtgttgctcttgttacaagagaaggaccagagatatgtatttgccactgtggatagcaag
ccgtcagtgatctctcttcagaagctgatagtcagggaagtggcccatgaggagaaagcc
atgtttcttatctgtgcctcctccaatgagccagagatgtacgagatccacaccacctcc
aaggaggagcgaaacacttggatgacacaaatacggcaagctgtcgagagctgtcctcat
actgaagagaggctgttcagtgaggaggaagaggctcgagcttccaggttcaaagagttt
caagagcggctgagtcagaaggacacagtaattgtgcaagctcttactgagaagctgcag
ctgtttgcagacatggcagagtctttggcaggtctagaggacacagcttcacgttctaga
cttctgcttcgaggagacgcctcagacctccagcagggggagaccctgctcaaaggagct
atcactgaggtggagaacctccagaacctgctgcagtccggagtgagggaggaggctcca
gcctctcgactggaggaaggaagcggctctggggccttgcccagacgagcggatactttt
gggggctatgacagcagccccaccatccttagtaagaatggcagtgtgaggaagaactct
tctggcgagtccagaaacagagacagaagccagagagcaagctccgaccctcagctcaaa
gacctctgtggcagccacaccctggagcagacggttgatgagagctcctgctctcctgcc
agatggaaccgcatctggtccaactccttccctgaggctgagttctttgacagagtggtg
atgctctcccaaaggctctatagtctgcaggccatcatatcacagcaggacagttacatc
gagctgcagcgggcctctttgacagagcgggcatccctgcccgggcgccaccgagggaac
gtgctcctggagcaggagaagcagcggactctggccctgcagagagaagagctggccagc
ttccacaagctgcagtctcagcaccggcaggagcagcagcgctgggagaaggagagggag
aggcaccgccagcaagtcgaggccactgaggccaggctccgacaaagggaggaggagtgc
aagcggctggaggaacatctggcaaaagaaaaggaggagctagacaggcagagggagacg
taccagcaggacctggagagactgagagagtccaccagagctgtggagaaagaaaaggaa
cgcctggaacaccagaagaagatcaagaggaagaccattgaggtggctcctctgtctggc
agtctgaacggggagctcctcatgtcgtctggcctcaccagctccaccagcgcctccgac
ctgcccctgcctcagaagcccctagtgcgcgccagcttgtctgtagcgccagccgactat
ccagagcgccctgaagtgatgttgcggcgcgagacgggctcctccaccctgccactgaag
acagaagtgccgctccatctcttcagcaccaccaaccagcagcacaaactggtcggggtg
cagcagcagatccccaccaagctagccgccttcagcagcggcaaagggaaaggaggcaag
agtggtaaagcttcacatcgcactgacagcacagcctcagtggatatgaagcagatgctg
aagttgtctggccgagacgaaaatgcccagaaggccaagcgctcgatcagcccccaccag
cagctctcgctgacagccctgcatcaccacacggatcaactcagtcctccagacagcgca
ggaacagacagccaaaccacctcctcggtcagcacctccctccctgcaaatattcagaag
ccccccatgcctcctgcacagtcccatcctcagccctccatgcagacttccaccatgcct
ccccactcacagagcagcggatttctccagttccagtcccacgtgcagccgcagggcctc
agtccaaacacccaggcccaagtcccggtaaatcacgggctcagccacagccacagccac
agccacagtcacagcatgccgcctccgtacaagatccccacagaggacctcaacaaggag
gacgtcatctttttctaa
DBGET
integrated database retrieval system
