KEGG   Seriola dumerili (greater amberjack): 111218155
Entry
111218155         CDS       T05606                                 
Symbol
itga4
Name
(RefSeq) integrin alpha-4
  KO
K06483  integrin alpha 4
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04510  Focal adhesion
sdu04512  ECM-receptor interaction
sdu04514  Cell adhesion molecules
sdu04672  Intestinal immune network for IgA production
sdu04810  Regulation of actin cytoskeleton
sdu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111218155 (itga4)
   04514 Cell adhesion molecules
    111218155 (itga4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111218155 (itga4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111218155 (itga4)
   04810 Regulation of actin cytoskeleton
    111218155 (itga4)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    111218155 (itga4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdu04147]
    111218155 (itga4)
   04515 Cell adhesion molecules [BR:sdu04515]
    111218155 (itga4)
   04090 CD molecules [BR:sdu04090]
    111218155 (itga4)
Exosome [BR:sdu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111218155 (itga4)
  Exosomal proteins of other cancer cells
   111218155 (itga4)
Cell adhesion molecules [BR:sdu04515]
 Integrins
  Integrin alpha subunits
   111218155 (itga4)
CD molecules [BR:sdu04090]
 Proteins
  111218155 (itga4)
SSDB
Motif
Pfam: Integrin_A_Ig_1 FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 111218155
NCBI-ProteinID: XP_022596011
LinkDB
Position
Unknown
AA seq 1030 aa
MYPSAVSVFVHCSFVLALIQVLVLVCPAAGYNLDQDHSLEFRGSPSSMFGYSVLLHHHRA
HNWLVVGAPVENSTSNPSIQSPGAVYRCNISAESRHCHRMPADVLSCGKTCEAESDHQWL
GVSLSRQPGDKGGHVMACAHRWKNIYYSKKDSQNHKLPNGVCYRYGSDLSHGRPMIPCYR
DHQRKFGEDYGSCQAGISNFLTEDLIIMGAPGTSYWMGSVLVFNTSSGGMSVYLDDDTGS
VSFGSYLGYSVGAGHFLSPATVEVVGGAPQYNQRGKVFIFTVVENMLRVISEVSGKELGA
YFGSSVCVVDLNADGLSDLLVGAPMATGVTREEGRVHVYINQGQANLSEAAFQLTGSDAY
AARFGETIADLGDLDDDGYHDVAVGAPQEDDLKGAVYIYNGRKDGISSTPSQRITGSTLG
HNLRMFGQSLSSGVDIDDNGYQDVAVGAFLSDSAVVLRTRPVIQVKASLALPEQIDQRLA
LCQEHKTPTVCFNVTVCFSVRSRRYTGAIELQYNLTSDLLHKPSFPHRFYFHGNGSSNST
KGRVRARHGHVTCTTHVAHQRKDVRDIFTPVQFEVSYSLRETKTHKASSKTFPPLKPILQ
QRAGHQNTITNQTRFARSCSLVNCSTNMQLSAQLVLPHQQDYFALGSGQTIMLKTSLLNS
GDNAFLPRLTLQFPNNIHYIKVLQNQENVVSCDVTQEINSTMVVVDCSVTSLLLPAHNQL
NISFLLDVNQNSTAGDINIHVNTSSDNYEREEYLHDNAISLPLHLKYGVNINIHGFVTPD
SFVFGDEDLTPVDCYTERFNYTYKVLNSGPSRSVDTVVDIVLPKILAPYRHRLLQVVDWQ
SSHGVCSLSDTTVSVIEDCAVPQASFIKQLIFFFSSTSTRRMFCGRGDELCERLVCRLGN
LEAGRDATIQLETRLNPAVLLQAPGRHGFMKLESTAMISSPKEDPHTVLIQKHPQAQVVV
EALFTQKPSMTVKIFIIVVSLVLGLLILAGLIWCLWKAGFFKRELQKKEEELRRHSWDYV
PKSSDRESFS
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgtatccctcagcggtcagcgtttttgtgcactgcagtttcgtactggccctcattcag
gtcctggtgctggtctgtcctgcagcaggatacaatctggatcaggaccacagtctggag
ttcagaggttccccctcctccatgtttggatactcagtcctgctgcatcaccacagagct
cataactggttggtggttggagcgccagtcgagaactcaacctccaatccgtccattcaa
tctccaggagctgtttatcgctgcaacatcagtgctgagtcccgtcactgccatcgcatg
cctgctgatgtgctgagctgtgggaagacgtgtgaagcagagagtgatcaccagtggctg
ggagtcagtctgtccagacaacctggcgacaaaggaggacatgtcatggcatgtgcacac
cgctggaagaacatctactactccaagaaagacagtcagaaccacaagctgcctaacgga
gtctgttatcgctatggcagtgacctgagtcacggccgacccatgatcccctgctataga
gaccaccagcggaagttcggtgaagattatgggtcatgtcaggccggtatttctaatttc
ctgacagaggatctgatcatcatgggggccccagggacgtcgtactggatgggctcagtc
ctggtgtttaacacgtccagtggagggatgtcagtgtaccttgatgatgacactggatca
gtcagcttcggaagctacctgggttactctgttggagccggtcacttcctgagtcctgct
actgtggaggtggtgggtggagctccgcagtacaaccagaggggcaaggtcttcatcttc
actgtagtggagaacatgttgcgtgtaatctctgaagtgtccggaaaagagctgggagct
tacttcggctccagtgtgtgcgtggtggatctgaatgcagatggtttgtcagatctgttg
gtcggtgctcccatggcaaccggcgttaccagggaggagggacgagtccacgtgtacatc
aaccagggccaggccaacttgtcggaggcggcgtttcagctgactggcagcgacgcctat
gcagcccggtttggagagaccattgctgacctgggagacctggacgatgacggttaccat
gatgtggcggttggtgcaccacaggaagatgacctaaaaggagctgtctacatctataat
ggcaggaaggacggcatctcatcaactccatctcagagaattactggatccaccttgggt
cataacctcaggatgttcggccagtcactgagctccggcgttgacattgacgataatggt
taccaggatgtggcagttggtgcgttcctctcagactcagctgtggttctcaggactcgt
ccagtgattcaggtgaaggcgtctctggctctgcctgagcagattgaccagcggctggcg
ctgtgccaagaacacaagactccaactgtctgcttcaatgtcaccgtctgcttcagtgtc
aggtccagacggtacacaggagctatagagcttcaatataatttgacctctgacctcctc
cataagccatccttccctcatcgtttctatttccatggtaacgggtcgtctaatagcaca
aagggtcgtgtgagagcacgacatggccatgtcacttgtacaacacatgtggctcaccaa
aggaaagacgtgagggatatttttactccagtccagtttgaagtttcctatagtctcaga
gaaacaaaaacccacaaagcctcttctaaaaccttccctccattaaaacctattctgcag
cagagagcaggacaccagaacaccatcaccaaccagactcggtttgctcgttcctgttct
ctggtaaactgttcaaccaacatgcagttgtcagctcaactagtgctgccacatcagcag
gactacttcgctcttggctccggacagaccatcatgttgaaaacatcgctgttgaactct
ggagacaatgcattcctgccacgtctgacactccaattcccaaacaacatccactacatt
aaagtcctgcagaaccaggagaatgtggtcagttgtgatgtcactcaggaaatcaacagt
acaatggtggttgttgactgcagcgtcaccagcctcctcctcccagcccacaaccagttg
aacatcagcttccttttggatgtgaaccagaacagcacagcaggtgacatcaacatccat
gttaacaccagcagtgataactatgagagggaggagtatctccatgacaacgccatcagt
ctcccccttcatcttaaatatggagtcaacatcaacatccacggttttgtgactcccgac
tcttttgtgtttggagatgaagacttgactccagttgactgctacactgaaagattcaac
tacacatacaaggtcttaaactctggtcccagcaggtcagtagatactgtggttgacatc
gtgttaccaaagatcctcgcaccgtaccgacacagactactgcaggtggtcgactggcag
tcatctcatggtgtgtgttcgctcagtgacacgactgtttcagtcatcgaggactgtgcc
gtccctcaagcctccttcatcaaacaactcatcttctttttctcctccacctccacccgc
agaatgttttgtggccgtggtgatgagctgtgcgagcggctggtgtgtcgtcttggcaac
ctggaggcggggagagatgccaccatccaactggagaccagactgaaccctgctgtacta
ctgcaagctccgggtcgtcacggtttcatgaagttggagagcacagcgatgatatcatct
cccaaagaagatcctcacaccgtcctcatccagaaacaccctcaagctcaggtggtggtt
gaagctctttttacccagaaaccctcaatgacagtgaagatcttcattattgtcgtcagt
ttagttttgggtcttttgatcttggctggtctcatctggtgtctgtggaaggctggtttc
ttcaagagggaacttcagaagaaggaggaggagctcaggagacacagctgggactacgtt
cccaaaagcagcgacagagagagcttttcctaa

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