Seriola dumerili (greater amberjack): 111218161
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Entry
111218161 CDS
T05606
Symbol
tfdp1
Name
(RefSeq) transcription factor Dp-1
KO
K04683
transcription factor Dp-1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03083
Polycomb repressive complex
sdu04110
Cell cycle
sdu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111218161 (tfdp1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111218161 (tfdp1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111218161 (tfdp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111218161 (tfdp1)
03036 Chromosome and associated proteins [BR:
sdu03036
]
111218161 (tfdp1)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
111218161 (tfdp1)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
111218161 (tfdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
111218161
NCBI-ProteinID:
XP_022596019
UniProt:
A0A3B4TRK1
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All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MAKDAGLIETNGELKVFIDQNMSPSKGVLSLVTVQPTAAPVAKQLLPKTLGPSNVNVAAH
MQHVPHMVIGTPQRPTVSNTILVNSPHTPSSQFLAQSQPSDASPWSSGKRGKKGEKNGKG
LRHFSMKVCEKVQKKGVTTYNEVADELVAEFSSSDNHMSPNDSHVYDQKNIRRRVYDALN
VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFK
NLVQRNRQTEQQANRPPPPNSIIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIH
DDIEVLKRMGMACGLEVGKCSPEDLKVARNLVPKALEPYVIEMAKGPISNVYITGGSSAN
GARYPASSDGCTDGTMASSSNDSHYSGSRVETPVSYMGDDDDEDEYDENDDED
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatgctggtctgattgaaacaaatggagagctgaaggttttcatcgatcag
aatatgagccccagcaaaggtgtcctatctttggttactgtccagcctacagctgcccct
gtggccaaacagctactacccaaaaccctagggccatccaatgtgaatgttgctgcacac
atgcaacatgtgccacacatggtgattggaacacctcagaggcccacagtatcaaatacc
attttggtaaacagtccacatacaccaagttcacagttccttgctcagagtcaaccatct
gatgcatctccctggtcatcaggaaagcgtggtaagaaaggggaaaagaatgggaagggt
ttgagacatttctcaatgaaagtctgtgagaaggtgcagaagaaaggagtaaccacctac
aatgaagtggcagatgaactggttgcagaatttagctcttcagacaaccacatgtcaccc
aatgactcgcatgtgtatgaccagaagaacattcggcggcgtgtgtacgatgcacttaat
gtgctcatggccatgaacattatctctaaagagaaaaaagaaatcaagtggattggcctg
cccaccaactcagcacaggagtgccaaaacctagaggtggaaagacaaaggcggctggag
aggattaagcagaaacaatcacagcttcaggaactcatactgcagcaaatagcttttaag
aacctggttcagcggaacagacagacagagcagcaggcaaacagacctccacctcccaac
tccatcatccaccttccctttattattgtcaacaccagcaagaaaactgtcatcgactgc
agcatctccaatgacaagttcgagtatttgttcaatttcgacagcatgtttgagatccac
gatgacattgaggtgctgaaacgtatgggcatggcctgtggtttggaggtgggaaagtgt
tctccagaagatctgaaggttgcacgtaacctggtgcccaaagctctggagccttacgtc
atagagatggcaaagggtcccatcagtaacgtctacatcactggaggatcctcagctaat
ggagcccgttaccctgcgagcagtgatggctgcactgatggcaccatggcctccagctcg
aatgactctcactacagcgggtctcgtgtggagactccggtgtcgtacatgggggatgat
gacgacgaggacgaatacgatgagaacgacgacgaagactaa
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