Seriola dumerili (greater amberjack): 111218186
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Entry
111218186 CDS
T05606
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111218186 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111218186 (xrcc5)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
111218186 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
Motif
Other DBs
NCBI-GeneID:
111218186
NCBI-ProteinID:
XP_022596065
UniProt:
A0A3B4UZD3
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSAPGEEPPFELAKKVIQKFVQRQVFAETKDELALVLLGTD
STKNPLARDGQYQNITVHRNLMIPDFDLLEEIENQIQPESQQVDWLDALVVCMDLLQTAT
SGKKYNRLNIALLTDLSTQASSDQLDVIIDNLKHAGITLQFFLPFPVEEDEEGGGDANGR
GHSHPGTGKGLSGEQRQGLDMMKHMLLSLDEEDGLDQIYTFRNAIEQLCMFKRIERRPMA
WPCQLTIGSSLSIRVVGYKAVTEEKLKKMWITVEAQTTMKEDVKRETVYCLDDDNETEVQ
KDDTIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQSMVHRHQFMGSQVIKMFA
ARDDEHAGVALSAVIRALDELKMVAIVRYAYDRRSNPQVGAAFPCIKQDYECLMYVQLPF
TEDLRQFTFPSLENNKKLTPSDTQLSAVDSLIDSMMLVEEDENGEQKDMFKVHHIPNPAF
QRHFQCLHHRAVNPGTPLPPMEPWLKAALECPEVINERCRAPLEEMKRKFTLTEVEKKKK
LKTSAQIFGKDSEEPDAKKVKGDEEEEEEYNLADIAEGSVTSVGSVDPARDFRTLIKRKS
IPFGDACQQLTHRIEQLLSNKNTQYYMKSITCIQAFREQSVKLGNADLYNSYLQSLKRSI
PNRGLEVFWDLLVQDAITLISKDEVEGSIVSKNEANQFLIAEEKKEEVAAPPAEDTGDVD
DLLDMM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggctaaatcagcgctggtgttgtgcatggatgtggggttctccatgtccaac
tctgccccgggtgaagagcctccctttgaactcgccaaaaaagtcatccagaagtttgtc
cagcgtcaggtttttgctgagactaaggatgaactggctttagttcttcttggcaccgat
tccaccaaaaaccctctggcccgggacggccagtaccagaacatcaccgtccaccgcaac
ctaatgataccagattttgacctactggaggaaattgagaatcagatccagccagagagt
cagcaggtggattggctggatgcgcttgttgtctgcatggatctccttcagacagcaacc
agtgggaagaagtacaatcgtctcaacattgccctcctgactgacctcagcacccaggcc
agttcagaccagctggatgttattattgacaaccttaaacatgctggcatcaccttgcag
ttctttttgccgttccctgtggaggaggatgaggagggtggaggggatgcaaatggaagg
ggccacagtcacccagggacaggcaaaggtctatctggggaacagaggcagggcctggac
atgatgaaacacatgttgctaagtctggatgaggaggacggtctggatcaaatttataca
ttcaggaatgcaatcgagcagctgtgcatgttcaagcggattgagaggagacccatggcc
tggccctgtcagctgacgattggcagctctctgtccatacgtgttgttgggtataaagct
gtgacagaggagaagctgaagaagatgtggattacagttgaggctcaaaccaccatgaaa
gaggacgtgaagagagagactgtctactgtctggatgatgacaacgagacagaggtgcaa
aaggatgataccattcaaggttttcgttatggaagtgacattgttcccttctccaaagta
gatcaagagcagatgaaatacaagcacgatgggaagtgctttgctgttctgggctttacc
aaacaaagcatggtacatcgtcatcagttcatgggaagtcaggtcatcaagatgtttgct
gccagggacgatgagcatgcaggagtagcactgtccgctgtcatccgggcattggatgag
ctcaaaatggtggccattgtccgttatgcgtatgaccgacgcagcaaccctcaagtcgga
gcagctttcccttgtatcaagcaggactatgagtgtctaatgtacgtccagctgcccttc
acagaagacctcagacaattcacatttccttctcttgaaaacaacaaaaagttaactcca
tcagacactcagctgtctgctgtggactctctgattgactccatgatgttggtggaggaa
gatgagaatggagaacaaaaggacatgttcaaggtccatcacattccaaaccctgccttc
cagagacacttccagtgtctgcatcatcgagcagtaaaccccggtaccccccttcccccc
atggagccgtggctgaaggctgctcttgagtgccctgaggtcattaatgaacgttgccga
gctccactagaggagatgaagaggaagtttactctaacagaagtggagaagaaaaagaag
ttgaagacaagtgctcagatttttggcaaagactctgaggagccggatgccaagaaggta
aaaggagatgaagaggaggaggaggagtataacctggctgacattgctgaaggctctgtt
acttcggtgggaagcgtggatccagcccgagacttccgcactctgatcaagcggaagagt
attccatttggagatgcctgtcagcaactgactcacaggatagagcagttgcttagcaac
aagaacacacagtactacatgaaaagcatcacctgtatccaggcttttagagagcagtcc
gttaagctgggaaatgctgatctgtacaatagctatctccagtccctgaaaaggagcatc
ccaaacagagggctggaggtcttctgggacctgcttgttcaagatgccataactttgatc
agcaaggacgaggttgaaggaagcatcgtgtccaaaaacgaagctaatcagtttctgatt
gccgaggagaagaaggaagaggtggctgctccaccagcagaagacacaggagatgttgat
gacttgctggacatgatgtaa
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