Seriola dumerili (greater amberjack): 111218197
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Entry
111218197 CDS
T05606
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111218197
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111218197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
Zip
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
111218197
NCBI-ProteinID:
XP_022596087
LinkDB
All DBs
Position
Unknown
AA seq
1979 aa
AA seq
DB search
MAQLLAPPGPDSFHRFSRESLKTIEGRIAEENAKKPKGEKKKRNDENKLKPSSDLEAGNS
LPLLYGDIPKGMVSTPLEDLDPYYCNQKTFIVLNKRKVIFRFNAAPALYLLSPFNPLRRI
SIWILVHSLFSVVIMCTILTNCVFMTLTRPPDWTKNVEYTFTAIYTFESLVKILARGFCI
GKFTFLRDPWNWLDFCVIVMAYVTEFVNLGNLSALRTFRVLRAFKAISVIPGLKTIVGAL
FQSVKKLSDVMILTVFCLSVFALIGLQLFMGHLKQKCLLWPTNKTLQENWTEYSLNESNY
YFIPGKLDPLLCGNGSEAGQCPEGYTCMRVGRNPDYDYTSFDSFGWAFLSLFRLMTQDYW
EKLYQQTLRAAGKPYMVFFVLVIFLGSFYLVNLILAVVAMAYEEQSQATIKEAKEKEEEF
QIMLEQLKRQQEDAQAAATAAATEGGEVSDKAGGAESSSDASKLSSKSAKERRNRRKKKK
EEEGKGAGEKFPKSNSQDSIKKARCRFTVEANLLNYDMKCSTAHQSFLSFRGPLFSSRRN
SRSSVFSFRSQAQDAGSETDFADDENSIFEDNLSRRGSLFLPRRFDRRSSSMSQCSFLPH
LLLPPNGIMHSSVDCNGVVSLVGGNSIPSSPVGLLLPKVTVDMASTGDNADTTDTEYRQA
GGGTNQEFMDFLDGPEARQRAHSIASVITSTMEELEESRQKCPPCWYDFAHTFLIWECCP
AWIKIKKVVKLIVMDPFVDLTITICIVLNTLFMAMEHYPMTPFFNGMLAVGNQVFTGIFT
AEMVLKIIALDPYYYFQEGWNIFDGIIVSLSLIELCLENVVGMSVLRSFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISADCTLPRW
HMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGTAKCIILYMMVMVIGNLVVLNLFLALLL
SSFSADNLAATEDDSETNNLQIAIGRIQKGIAFAKSLLRSSCNSVCLRNKKKGKGDEKSL
DELHKPLGPNGVPNHTIKDFPKNGNGDVIGVDKNGDKYIVSSKSDDSIMSFINNPSLTVT
VPIAVGESDFENLNTEDFSSASSDLPGCHVIVDDDGQDSSSEGSTVEDAALGEGGESTDF
ELEEAMDPDACFPDGCVQKFQFCQVNVDVGWWKVWWTLRKTCYRIVEHNWFESFIIFMIL
LSSGALAFEDIYIEKRKTIKTVLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAWCWLDF
LIVDVSLVSMVANAMGCSDLGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIFN
VLLVCLIFWLIFSIMGVNLFAGKYNYCVNSTTDRRFLPSEVKNKTECDAFGNETRWKNVK
INFDNVGVGYLALLQVATFKGWLDIMYHAVDSQSKPQEQPEYEINLKMYAYFVVFIIFGA
FFTLNLFIGVIIDNFNQQKKKIRGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKIQ
GYIFDFTTKQAFDIVIMVLIWLNMVTMMVETADQSKDKNKILYVINVVFICMFTGECLLK
MISLRQYYFTNGWNIFDFIIVILSIAGMFLSDLIERYFVSPTLFRVIRLARIGRVLRLIK
SAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKESGIDDLFNFETFG
NSMICLFQITTSAGWDGLLAPILNKKEDECNAKLEHPGSYVIGDCGNPSVGIAFFVSYII
ICFLIVVNMYIAVILENFSVATEESADPLSEDDFEMFYEVWERFDPHATQFMEYNKLSEF
ADALESPLRIAKPNKLELISMDLPMVSGERIHCLDILFAFTKRVLGEDGEMDILRGQMEE
RFMASNPSKVSYEPITTTLRRKQEDLSAVVIQRAYRHYAKNHAASKPTARDDIQKDETLI
DKEVAVTDDLKKSANKNELAPSTASQPSCNSVTTNGKNKYEKDKSEKEVVGKDVREQDI
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgcaccaccaggtccagacagcttccaccgctttagtcgtgagtcc
ctcaaaaccattgagggacggattgctgaggagaacgccaagaaacccaagggcgagaag
aaaaaacgcaatgatgagaataagctcaagcccagcagtgacctggaggcaggaaattca
ctccctctcctgtatggggacattcctaaaggcatggtgtcgacaccgctggaagatctc
gacccctactactgtaatcagaaaactttcatagtattaaacaaaagaaaggtcatcttc
cgcttcaatgccgctcctgccttgtacctcctgagccccttcaaccctcttagaagaata
tcaatttggattttggtacactcattgttcagtgtggtgatcatgtgcaccatcctcacc
aactgtgtatttatgacactgaccagaccgcctgattggacaaagaatgtagagtataca
ttcactgcaatatatacctttgaatcccttgttaaaattttagctcgagggttctgtata
ggaaagttcacatttctaagagatccctggaactggctggatttctgtgtcattgttatg
gcgtatgtaacagagtttgtaaacctaggcaatctttcagctcttcgcacattcagagtg
ctgagagctttcaaagctatttcagttatcccaggcctgaagaccattgtcggtgcgttg
ttccagtcagtgaagaagctttccgatgtgatgatcctcaccgtcttctgcttaagcgtc
tttgccctcatagggttacagttgtttatgggccatttaaagcaaaagtgtctactgtgg
ccaacaaacaaaacattacaggaaaactggactgagtactcgctcaatgagagtaattat
tattttattccaggaaaactagatccattgctttgtggaaatggcagtgaggctgggcag
tgtccggaggggtacacatgcatgagagtgggaaggaatccagactatgattacaccagc
tttgactcatttggttgggccttcctttctctgtttcgactgatgacacaggattactgg
gagaaactttaccaacagacgttgcgggcagctgggaagccctacatggtgttttttgta
ctagtgatattccttggttccttctacctggtcaacctgatcttggctgtagtagctatg
gcctatgaggagcagagccaggccaccattaaggaggcgaaggagaaggaggaggagttt
cagatcatgctggagcagctgaaaaggcagcaagaggatgctcaggcagcagcaactgcg
gctgctactgaaggtggggaggtcagtgacaaagccggcggcgctgagagctcatctgac
gcctccaagctcagctcaaaaagtgccaaagagagacgcaacaggcgaaaaaaaaaaaag
gaagaggaaggcaaaggggctggtgagaagtttcctaaatccaactcacaggacagtata
aagaaagctcgctgccgcttcaccgtggaagcaaacctgctcaactatgacatgaaatgc
tcgactgcacatcagtcctttctgagttttcgtggacccctgttctcatccagacggaac
agcaggagcagcgttttcagtttccgaagccaagcacaggacgcggggtcagagactgac
tttgctgatgatgagaacagtatttttgaggacaacctgagtcggaggggttctttattt
cttccccggaggtttgatcgacgcagcagcagtatgagccagtgcagcttcttgccacat
ctcctgcttccacccaatgggatcatgcacagctctgtagactgcaatggggttgtgtct
ctggtgggtgggaattctatcccatcgtcacctgtggggctccttctgcctaaagtgaca
gtagatatggcctccaccggagacaatgctgacaccactgacacagagtacagacaggct
ggtggaggtacaaaccaggagtttatggacttccttgatggcccagaggccagacagaga
gctcatagtatagctagtgtgattaccagcacaatggaggagcttgaagagtcaaggcag
aagtgtcctccttgctggtacgattttgcccacaccttcctcatctgggaatgttgtcca
gcatggataaagatcaagaaggtggtcaaactaattgtgatggacccattcgtggaccta
accatcaccatctgcattgtgctcaatacattgtttatggccatggagcattatccaatg
acccctttttttaacgggatgctggctgtgggcaatcaggtattcactggcatcttcact
gctgaaatggtcctcaagatcattgcattggacccatactattactttcaggaagggtgg
aatatttttgatggaatcatcgttagtttaagcttgattgagctttgtttggaaaacgtg
gttggcatgtctgttctgagatcgttcagattgctgagagtattcaagttggctaaatca
tggcccactcttaacacactgatcaaaataattggtaattcagtgggggctttgggcaac
ctgaccctagtactggctattatcgtcttcatctttgctgtggtgggcatgcaactgttt
ggaaaaagctacaaggactgtgtgtgtaaaatctctgccgactgcactctgccccgatgg
cacatgagtgacttcttccattcattcctcattgtgttccgagtgctttgtggagagtgg
atagaaaccatgtgggactgtatggaggtggctgggacagccaagtgcatcattctctac
atgatggtcatggttattggaaaccttgtggtgctgaacctgttcctggccctgctgctg
agctcattcagtgccgacaacctggcagcgacagaggacgacagtgagacgaacaatttg
cagattgccattggacggattcaaaaaggcatcgccttcgccaagtccctgcttcgaagc
agctgtaacagcgtctgtctcaggaataagaagaaagggaagggtgatgaaaaatctcta
gatgagctccacaaacctttaggaccgaatggtgtccccaaccataccatcaaagacttt
cctaagaatggcaacggggatgtgatcggagtggacaaaaatggagacaagtacatagtc
agcagcaagagtgatgactctattatgtctttcatcaacaatcctagtctgactgtcaca
gttcctattgctgtgggagagtctgactttgaaaacctcaacacagaggacttcagcagt
gcctcatctgatctaccaggatgccatgtgattgtcgatgacgatgggcaggacagctcc
tctgagggcagcacagtggaagatgcagcacttggggagggaggagagtctacagacttt
gaactagaagaagctatggatcctgatgcctgctttcctgacggctgcgtgcaaaagttc
cagttttgtcaggtaaatgtggacgtgggctggtggaaggtgtggtggacgctacgaaag
acctgttaccgaatagtggagcacaactggtttgagagcttcatcatcttcatgatcttg
ctcagcagtggagcactggctttcgaagacatctacattgagaagaggaagaccattaaa
acggtgttggagtttgcagataaaatcttcacttacatcttcattctggagatgttattg
aagtgggtggcgtacggatttgccaagtacttcacaaatgcctggtgctggctggacttc
ctcattgttgatgtctcactggtcagtatggtagccaacgccatgggatgctctgacctc
ggtgccatcaagtctctgagaaccctgcgagctttgaggcccctgagagcattgtcacgg
ttcgagggcatgagggtggttgtcaatgcgctgctgggagccattccttccatcttcaat
gtgctgttggtatgtctcatattctggctcatcttcagcatcatgggagtcaacttattt
gctgggaagtacaactattgtgtcaacagtaccacagacaggcgtttccttccatcagag
gtgaaaaacaagacagaatgtgatgcctttggcaacgaaactcgctggaagaatgtcaaa
atcaactttgacaatgttggagtgggttacctggcgctgctgcaagtggctactttcaag
ggctggttggacatcatgtatcatgctgtggactctcaaagcaagccacaagaacaacct
gagtatgagatcaacctgaagatgtacgcgtattttgttgttttcatcatattcggagcc
ttcttcacactcaatctctttatcggtgtcatcatagacaacttcaatcagcaaaagaaa
aagataagaggccaagacatcttcatgactgaagaacagaagaaatactacaatgccatg
aaaaagctggggtcaaagaaaccacaaaaacctattcctagaccgtcaaacaagattcaa
ggatacatctttgacttcaccacaaaacaagcttttgatattgtaataatggttctaata
tggcttaatatggtaaccatgatggtagaaactgctgaccagtcaaaagacaagaacaaa
attctctacgtgatcaatgtagtattcatctgcatgttcactggagagtgtctgttgaag
atgatctcgcttcgccaatactatttcacaaatggctggaatatattcgatttcatcata
gtcattctgtcgatcgctggcatgtttctctcagacctgatcgagaggtattttgtttca
ccaaccttgttcagagtcatccgattggctcggattggccgcgtcctccgacttattaaa
agtgccaaaggaatccgcacactcttgtttgccttgatgatgtcactgcctgccttgttc
aacattggtctcctgctcttcttggtgatgtttatctatgccatctttggcatgtcaaac
tttgcttatgtgaagaaggaatcaggcatagatgaccttttcaattttgagacattcggc
aacagcatgatctgtttgttccagatcaccacctcggcagggtgggatggcctactagct
cccattctcaacaaaaaagaagatgagtgtaatgctaaacttgagcatcctggcagttat
gttataggagactgtggaaatccgtctgttggaattgccttctttgtgagctatatcatc
atctgtttcctaattgtggtgaatatgtacattgcagtcatcctggaaaacttcagtgtg
gccactgaggagagtgcggacccactaagtgaggatgattttgaaatgttttatgaggtc
tgggaaaggtttgatcctcatgcaacacagttcatggagtacaataagctgtcagaattt
gcagatgctttggagtcaccgttacgcatagctaagcctaacaagctcgaactgatctcc
atggatctacccatggtgagtggagaacgcattcactgcctggacatcctgtttgcattt
acaaaacgtgttctaggtgaggatggggagatggacatcctaagggggcagatggaggag
cgcttcatggcttccaatccttccaaagtgtcctacgaacccatcactaccactctccgc
cgtaaacaggaggacttgtcagccgttgtcatccagagagcatatagacactatgcaaag
aatcatgctgccagtaagcccacagccagggatgatattcaaaaggatgaaacgctcatt
gacaaagaggttgctgtcacagacgacctcaaaaaaagcgccaataaaaatgaactagca
ccctcaactgcctctcaaccatcatgtaacagtgtgacaacaaatggaaaaaacaaatat
gaaaaagacaaaagtgaaaaggaggttgtgggcaaagatgtcagggagcaagatatataa
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integrated database retrieval system
