KEGG   Seriola dumerili (greater amberjack): 111218197
Entry
111218197         CDS       T05606                                 
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
  KO
K04834  voltage-gated sodium channel type II alpha
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:sdu04040]
    111218197
Ion channels [BR:sdu04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   111218197
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc IQ_SCN5A_C PKD_channel GPHH ATP-synt_B Zip Lustrin_cystein
Other DBs
NCBI-GeneID: 111218197
NCBI-ProteinID: XP_022596087
LinkDB
Position
Unknown
AA seq 1979 aa
MAQLLAPPGPDSFHRFSRESLKTIEGRIAEENAKKPKGEKKKRNDENKLKPSSDLEAGNS
LPLLYGDIPKGMVSTPLEDLDPYYCNQKTFIVLNKRKVIFRFNAAPALYLLSPFNPLRRI
SIWILVHSLFSVVIMCTILTNCVFMTLTRPPDWTKNVEYTFTAIYTFESLVKILARGFCI
GKFTFLRDPWNWLDFCVIVMAYVTEFVNLGNLSALRTFRVLRAFKAISVIPGLKTIVGAL
FQSVKKLSDVMILTVFCLSVFALIGLQLFMGHLKQKCLLWPTNKTLQENWTEYSLNESNY
YFIPGKLDPLLCGNGSEAGQCPEGYTCMRVGRNPDYDYTSFDSFGWAFLSLFRLMTQDYW
EKLYQQTLRAAGKPYMVFFVLVIFLGSFYLVNLILAVVAMAYEEQSQATIKEAKEKEEEF
QIMLEQLKRQQEDAQAAATAAATEGGEVSDKAGGAESSSDASKLSSKSAKERRNRRKKKK
EEEGKGAGEKFPKSNSQDSIKKARCRFTVEANLLNYDMKCSTAHQSFLSFRGPLFSSRRN
SRSSVFSFRSQAQDAGSETDFADDENSIFEDNLSRRGSLFLPRRFDRRSSSMSQCSFLPH
LLLPPNGIMHSSVDCNGVVSLVGGNSIPSSPVGLLLPKVTVDMASTGDNADTTDTEYRQA
GGGTNQEFMDFLDGPEARQRAHSIASVITSTMEELEESRQKCPPCWYDFAHTFLIWECCP
AWIKIKKVVKLIVMDPFVDLTITICIVLNTLFMAMEHYPMTPFFNGMLAVGNQVFTGIFT
AEMVLKIIALDPYYYFQEGWNIFDGIIVSLSLIELCLENVVGMSVLRSFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISADCTLPRW
HMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGTAKCIILYMMVMVIGNLVVLNLFLALLL
SSFSADNLAATEDDSETNNLQIAIGRIQKGIAFAKSLLRSSCNSVCLRNKKKGKGDEKSL
DELHKPLGPNGVPNHTIKDFPKNGNGDVIGVDKNGDKYIVSSKSDDSIMSFINNPSLTVT
VPIAVGESDFENLNTEDFSSASSDLPGCHVIVDDDGQDSSSEGSTVEDAALGEGGESTDF
ELEEAMDPDACFPDGCVQKFQFCQVNVDVGWWKVWWTLRKTCYRIVEHNWFESFIIFMIL
LSSGALAFEDIYIEKRKTIKTVLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAWCWLDF
LIVDVSLVSMVANAMGCSDLGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIFN
VLLVCLIFWLIFSIMGVNLFAGKYNYCVNSTTDRRFLPSEVKNKTECDAFGNETRWKNVK
INFDNVGVGYLALLQVATFKGWLDIMYHAVDSQSKPQEQPEYEINLKMYAYFVVFIIFGA
FFTLNLFIGVIIDNFNQQKKKIRGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKIQ
GYIFDFTTKQAFDIVIMVLIWLNMVTMMVETADQSKDKNKILYVINVVFICMFTGECLLK
MISLRQYYFTNGWNIFDFIIVILSIAGMFLSDLIERYFVSPTLFRVIRLARIGRVLRLIK
SAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKESGIDDLFNFETFG
NSMICLFQITTSAGWDGLLAPILNKKEDECNAKLEHPGSYVIGDCGNPSVGIAFFVSYII
ICFLIVVNMYIAVILENFSVATEESADPLSEDDFEMFYEVWERFDPHATQFMEYNKLSEF
ADALESPLRIAKPNKLELISMDLPMVSGERIHCLDILFAFTKRVLGEDGEMDILRGQMEE
RFMASNPSKVSYEPITTTLRRKQEDLSAVVIQRAYRHYAKNHAASKPTARDDIQKDETLI
DKEVAVTDDLKKSANKNELAPSTASQPSCNSVTTNGKNKYEKDKSEKEVVGKDVREQDI
NT seq 5940 nt   +upstreamnt  +downstreamnt
atggcacagctgcttgcaccaccaggtccagacagcttccaccgctttagtcgtgagtcc
ctcaaaaccattgagggacggattgctgaggagaacgccaagaaacccaagggcgagaag
aaaaaacgcaatgatgagaataagctcaagcccagcagtgacctggaggcaggaaattca
ctccctctcctgtatggggacattcctaaaggcatggtgtcgacaccgctggaagatctc
gacccctactactgtaatcagaaaactttcatagtattaaacaaaagaaaggtcatcttc
cgcttcaatgccgctcctgccttgtacctcctgagccccttcaaccctcttagaagaata
tcaatttggattttggtacactcattgttcagtgtggtgatcatgtgcaccatcctcacc
aactgtgtatttatgacactgaccagaccgcctgattggacaaagaatgtagagtataca
ttcactgcaatatatacctttgaatcccttgttaaaattttagctcgagggttctgtata
ggaaagttcacatttctaagagatccctggaactggctggatttctgtgtcattgttatg
gcgtatgtaacagagtttgtaaacctaggcaatctttcagctcttcgcacattcagagtg
ctgagagctttcaaagctatttcagttatcccaggcctgaagaccattgtcggtgcgttg
ttccagtcagtgaagaagctttccgatgtgatgatcctcaccgtcttctgcttaagcgtc
tttgccctcatagggttacagttgtttatgggccatttaaagcaaaagtgtctactgtgg
ccaacaaacaaaacattacaggaaaactggactgagtactcgctcaatgagagtaattat
tattttattccaggaaaactagatccattgctttgtggaaatggcagtgaggctgggcag
tgtccggaggggtacacatgcatgagagtgggaaggaatccagactatgattacaccagc
tttgactcatttggttgggccttcctttctctgtttcgactgatgacacaggattactgg
gagaaactttaccaacagacgttgcgggcagctgggaagccctacatggtgttttttgta
ctagtgatattccttggttccttctacctggtcaacctgatcttggctgtagtagctatg
gcctatgaggagcagagccaggccaccattaaggaggcgaaggagaaggaggaggagttt
cagatcatgctggagcagctgaaaaggcagcaagaggatgctcaggcagcagcaactgcg
gctgctactgaaggtggggaggtcagtgacaaagccggcggcgctgagagctcatctgac
gcctccaagctcagctcaaaaagtgccaaagagagacgcaacaggcgaaaaaaaaaaaag
gaagaggaaggcaaaggggctggtgagaagtttcctaaatccaactcacaggacagtata
aagaaagctcgctgccgcttcaccgtggaagcaaacctgctcaactatgacatgaaatgc
tcgactgcacatcagtcctttctgagttttcgtggacccctgttctcatccagacggaac
agcaggagcagcgttttcagtttccgaagccaagcacaggacgcggggtcagagactgac
tttgctgatgatgagaacagtatttttgaggacaacctgagtcggaggggttctttattt
cttccccggaggtttgatcgacgcagcagcagtatgagccagtgcagcttcttgccacat
ctcctgcttccacccaatgggatcatgcacagctctgtagactgcaatggggttgtgtct
ctggtgggtgggaattctatcccatcgtcacctgtggggctccttctgcctaaagtgaca
gtagatatggcctccaccggagacaatgctgacaccactgacacagagtacagacaggct
ggtggaggtacaaaccaggagtttatggacttccttgatggcccagaggccagacagaga
gctcatagtatagctagtgtgattaccagcacaatggaggagcttgaagagtcaaggcag
aagtgtcctccttgctggtacgattttgcccacaccttcctcatctgggaatgttgtcca
gcatggataaagatcaagaaggtggtcaaactaattgtgatggacccattcgtggaccta
accatcaccatctgcattgtgctcaatacattgtttatggccatggagcattatccaatg
acccctttttttaacgggatgctggctgtgggcaatcaggtattcactggcatcttcact
gctgaaatggtcctcaagatcattgcattggacccatactattactttcaggaagggtgg
aatatttttgatggaatcatcgttagtttaagcttgattgagctttgtttggaaaacgtg
gttggcatgtctgttctgagatcgttcagattgctgagagtattcaagttggctaaatca
tggcccactcttaacacactgatcaaaataattggtaattcagtgggggctttgggcaac
ctgaccctagtactggctattatcgtcttcatctttgctgtggtgggcatgcaactgttt
ggaaaaagctacaaggactgtgtgtgtaaaatctctgccgactgcactctgccccgatgg
cacatgagtgacttcttccattcattcctcattgtgttccgagtgctttgtggagagtgg
atagaaaccatgtgggactgtatggaggtggctgggacagccaagtgcatcattctctac
atgatggtcatggttattggaaaccttgtggtgctgaacctgttcctggccctgctgctg
agctcattcagtgccgacaacctggcagcgacagaggacgacagtgagacgaacaatttg
cagattgccattggacggattcaaaaaggcatcgccttcgccaagtccctgcttcgaagc
agctgtaacagcgtctgtctcaggaataagaagaaagggaagggtgatgaaaaatctcta
gatgagctccacaaacctttaggaccgaatggtgtccccaaccataccatcaaagacttt
cctaagaatggcaacggggatgtgatcggagtggacaaaaatggagacaagtacatagtc
agcagcaagagtgatgactctattatgtctttcatcaacaatcctagtctgactgtcaca
gttcctattgctgtgggagagtctgactttgaaaacctcaacacagaggacttcagcagt
gcctcatctgatctaccaggatgccatgtgattgtcgatgacgatgggcaggacagctcc
tctgagggcagcacagtggaagatgcagcacttggggagggaggagagtctacagacttt
gaactagaagaagctatggatcctgatgcctgctttcctgacggctgcgtgcaaaagttc
cagttttgtcaggtaaatgtggacgtgggctggtggaaggtgtggtggacgctacgaaag
acctgttaccgaatagtggagcacaactggtttgagagcttcatcatcttcatgatcttg
ctcagcagtggagcactggctttcgaagacatctacattgagaagaggaagaccattaaa
acggtgttggagtttgcagataaaatcttcacttacatcttcattctggagatgttattg
aagtgggtggcgtacggatttgccaagtacttcacaaatgcctggtgctggctggacttc
ctcattgttgatgtctcactggtcagtatggtagccaacgccatgggatgctctgacctc
ggtgccatcaagtctctgagaaccctgcgagctttgaggcccctgagagcattgtcacgg
ttcgagggcatgagggtggttgtcaatgcgctgctgggagccattccttccatcttcaat
gtgctgttggtatgtctcatattctggctcatcttcagcatcatgggagtcaacttattt
gctgggaagtacaactattgtgtcaacagtaccacagacaggcgtttccttccatcagag
gtgaaaaacaagacagaatgtgatgcctttggcaacgaaactcgctggaagaatgtcaaa
atcaactttgacaatgttggagtgggttacctggcgctgctgcaagtggctactttcaag
ggctggttggacatcatgtatcatgctgtggactctcaaagcaagccacaagaacaacct
gagtatgagatcaacctgaagatgtacgcgtattttgttgttttcatcatattcggagcc
ttcttcacactcaatctctttatcggtgtcatcatagacaacttcaatcagcaaaagaaa
aagataagaggccaagacatcttcatgactgaagaacagaagaaatactacaatgccatg
aaaaagctggggtcaaagaaaccacaaaaacctattcctagaccgtcaaacaagattcaa
ggatacatctttgacttcaccacaaaacaagcttttgatattgtaataatggttctaata
tggcttaatatggtaaccatgatggtagaaactgctgaccagtcaaaagacaagaacaaa
attctctacgtgatcaatgtagtattcatctgcatgttcactggagagtgtctgttgaag
atgatctcgcttcgccaatactatttcacaaatggctggaatatattcgatttcatcata
gtcattctgtcgatcgctggcatgtttctctcagacctgatcgagaggtattttgtttca
ccaaccttgttcagagtcatccgattggctcggattggccgcgtcctccgacttattaaa
agtgccaaaggaatccgcacactcttgtttgccttgatgatgtcactgcctgccttgttc
aacattggtctcctgctcttcttggtgatgtttatctatgccatctttggcatgtcaaac
tttgcttatgtgaagaaggaatcaggcatagatgaccttttcaattttgagacattcggc
aacagcatgatctgtttgttccagatcaccacctcggcagggtgggatggcctactagct
cccattctcaacaaaaaagaagatgagtgtaatgctaaacttgagcatcctggcagttat
gttataggagactgtggaaatccgtctgttggaattgccttctttgtgagctatatcatc
atctgtttcctaattgtggtgaatatgtacattgcagtcatcctggaaaacttcagtgtg
gccactgaggagagtgcggacccactaagtgaggatgattttgaaatgttttatgaggtc
tgggaaaggtttgatcctcatgcaacacagttcatggagtacaataagctgtcagaattt
gcagatgctttggagtcaccgttacgcatagctaagcctaacaagctcgaactgatctcc
atggatctacccatggtgagtggagaacgcattcactgcctggacatcctgtttgcattt
acaaaacgtgttctaggtgaggatggggagatggacatcctaagggggcagatggaggag
cgcttcatggcttccaatccttccaaagtgtcctacgaacccatcactaccactctccgc
cgtaaacaggaggacttgtcagccgttgtcatccagagagcatatagacactatgcaaag
aatcatgctgccagtaagcccacagccagggatgatattcaaaaggatgaaacgctcatt
gacaaagaggttgctgtcacagacgacctcaaaaaaagcgccaataaaaatgaactagca
ccctcaactgcctctcaaccatcatgtaacagtgtgacaacaaatggaaaaaacaaatat
gaaaaagacaaaagtgaaaaggaggttgtgggcaaagatgtcagggagcaagatatataa

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