KEGG   Seriola dumerili (greater amberjack): 111218236
Entry
111218236         CDS       T05606                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04137  Mitophagy - animal
sdu04144  Endocytosis
sdu04145  Phagosome
sdu04148  Efferocytosis
sdu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111218236
   04145 Phagosome
    111218236
   04137 Mitophagy - animal
    111218236
   04148 Efferocytosis
    111218236
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    111218236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdu04131]
    111218236
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdu04147]
    111218236
   04031 GTP-binding proteins [BR:sdu04031]
    111218236
Membrane trafficking [BR:sdu04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    111218236
 Endosome - Lysosome transport
    111218236
Exosome [BR:sdu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111218236
  Exosomal proteins of other body fluids (saliva and urine)
   111218236
  Exosomal proteins of colorectal cancer cells
   111218236
  Exosomal proteins of melanoma cells
   111218236
GTP-binding proteins [BR:sdu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    111218236
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 Tfb2_C
Other DBs
NCBI-GeneID: 111218236
NCBI-ProteinID: XP_022596153
UniProt: A0A3B4V1G6
LinkDB
Position
Unknown
AA seq 216 aa
MSSRGSGGRTNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctccagagggagtggaggccgcaccaacggcacgctgccgcagaccaagatctgc
cagttcaagctggtgctgctgggtgacatggccgtgggcaagtccagcctggtgctgcgc
ttcgtcaagggacagtttgacgagttccaggagacaaccataggagctgcgttcctggcc
cagtccgtgtgtctagatgacaccacggtgaagtttgagatctgggacactgcaggtcaa
gagcgataccacagcctggcccccatgtactacagaggagctcaggctgccatcgtggtc
tttgacatcaccaagccggagacctttgagagagccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacatcgtgatcgctctggccgggaacaaagccgacctggctgag
aagagactagtagagtatgaggaagcccagacatatgcagaagacaccggcctgctcttt
atggagacctcagccaagacagccatgaacgtcaatgagctcttcctggccattgcaaaa
aagatgccaaaaacagacacccagaacccgacacacgcagcgcgacatcggggagtcaac
ctccaggacccagacgcccactctacccgagcctgctgcggtgggaactag

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