Seriola dumerili (greater amberjack): 111218334 Help Entry 111218334         CDS       T05606                                  Symbol col18a1 Name (RefSeq) collagen alpha-1(XVIII) chain   KO K06823   collagen type XVIII alpha Organism sdu  Seriola dumerili (greater amberjack) Brite KEGG Orthology (KO) [BR:sdu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sdu04147]     111218334 (col18a1)    00535 Proteoglycans [BR:sdu00535]     111218334 (col18a1)    00536 Glycosaminoglycan binding proteins [BR:sdu00536]     111218334 (col18a1) Exosome [BR:sdu04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    111218334 (col18a1) Proteoglycans [BR:sdu00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    111218334 (col18a1) Glycosaminoglycan binding proteins [BR:sdu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111218334 (col18a1) SSDB OrthologParalogGFIT Motif Pfam:  Endostatin Collagen Collagen_trimer DUF1554 Laminin_G_3 Motif Other DBs NCBI-GeneID:  111218334 NCBI-ProteinID:  XP_022596312 LinkDB All DBs Position Unknown AA seq 1398 aa AA seqDB search MDHEGSGSPAGSGEQPTEDGVAAEIIDEGHGIQKTVQTWDETTPLLTSLIPTTQPKNDRP PERGTTGISSRILKPEDSGVTLTQLIGDPPPSEITRVYGPDNSPAYVFGPDANTGQLARA HLPSPFYRDFALIFNLQPTSDRGGVIFSVTDASQQIMYVGVKLSPVQGDNQNVILYYTEP DSQQSYEAARFLVPSLRDTWTRFAIAVRDDKVTFYLNCDTDPQVMRIERSPDEMELEAGA GVFIGQAGGADPEKFLGLIGELRVVGDPRAAERHCEEDEDDSDMASGEGSGYEERRPLKP AVERDRWTTTPPSSRPIQQPPVIKKEEVSVTRETGAVGSKGEKGDQGDRGEKGDRGPIGP KGESSSGSSSRGAARGEKGEPGEKGTKGSAGFGYQGKKGDPGLPGPPGPPGPPGPATEFS VGNDGSVVSRAPAPRGPAGPQGVPGPQGPPGADGEPGDPGEDGKTGPDGPPGFPGTPGDP GTKGEKGDRGEGQPGPRGPPGLPGPPGPGYRSTFVDMEGSGFPDLESIRGLPGPPGPPGP PGLPGPSTTGPAVSSGALGPPGKDGAPGQPGLPGLPGTDGLPGTPGPKGEKGDSGELGLP GAVGEKGASGNPGLPGPAGEPGLAGLPGPIGPVGQPGPPGPPGPSYRVGFDDMEGSGGGF TNGFPGVRGPEGSQGPPGLPGLPGEPGLPGIPGQKGTEGLVGRDGRPGLDGFPGPQGPKG DRGDKGERGDSGRDGNGLPGPPGPPGPPGQIIYSTSGNFDGAVGSVGPQGGPGLPGQAGF PGPIGPKGDRGDPGPPGYGPRGEKGEPGLVIGPDGNLLSLEGLTGLKGDRGPSGPVGPPG QYGPPGLKGEIGMPGRPGRPGVNGYKGEKGESGGGAGYGYPGVPGPPGPPGPPGSPGPAI PLDRFNRYDETSRNYPVVKGEKGERGDRGLPGIPGTANFDIYTFKNELKGESGDPGVKGE KGEPGGGYYDPRFGGVQGPPGPHGKPGLPGPKGDSIMGPAGPQGPPGPPGIGYDGRPGPP GPPGPPGAPGSLPGAYRPNHPVSVPGPPGPPGPPGTPGLTSGVTVLRSYETMIASARRQA EGSLIYIIDKADLYLRVRDGLRQVMLGEYRPFFRDLENEVAEVQPPPVILYPQSQDQSRN NGAGHYSQGGSAIRPIEPPPHPPVDPRYPPQYDPRFPDPRHTGQTDGRLATQQTENRYPV TPQRRPSPPVPQPGVHVGTSASGLHLIALNAPQTGNMRGIRGADFLCFQQARAVGLKGTF RAFLSSKLQDLYTIVRRSDRDSFPILNLKDQVLFSSWESIFGDNASKMRENVPIYSFDGR DILRDSAWPEKMVWHGSNNKGHRQTDHYCETWRAGDRAVTGLASSLQSGHVLQQTSSSCS GSYIVLCIENALITHSKK NT seq 4197 nt NT seq  +upstreamnt  +downstreamnt atggaccatgaggggtctggcagtccagcaggtagtggagaacagccaacagaggatggg gttgcagcggagatcattgatgaaggacatgggatccaaaagactgtgcagacttgggat gagaccactcctctgttgacctctctaatacctacaacgcaacccaagaatgaccggcca ccagaaaggggcacaacagggatttcgtcacgcatacttaaacctgaagacagtggagtc accctgacgcagctgattggggatcctcctcctagtgagatcacccgggtctatgggccc gacaacagccccgcgtatgtctttggccccgatgccaacacgggccagctggcacgcgct cacctgccgagcccattctaccgagactttgccctcatcttcaacctgcaacctacctct gacaggggtggagtcatcttctctgtcacagatgcctcacagcagatcatgtatgtgggt gtcaaactgtcacctgtccagggtgacaaccagaatgtcatcctgtactacacagaaccc gactcacagcagtcttatgaagcagccaggttccttgtaccctccttgagggatacctgg acccgtttcgctatcgccgtgagggatgacaaggtgacgttctacctcaactgtgacaca gaccctcaggtgatgcgcatcgagaggtccccggatgagatggagctggaggccggtgcc ggcgtcttcattgggcaggctggaggagctgatcctgagaagttcctggggctcattggt gagctgagggtggtgggagacccccgtgctgctgagagacactgtgaagaggacgaggat gactcagatatggcttcaggtgaaggaagtggctatgaagaaagaagacccttaaaacca gccgtggagagagacagatggacgactactcctccttcctctcggcccattcagcagcca ccggtcatcaagaaagaggaggtgtctgttacaagagagacaggagcagttgggtctaaa ggagagaagggtgaccaaggggatagaggagagaaaggagataggggtccaattgggccg aagggagaatcaagctctggctccagttcccggggggccgcccgtggagagaagggagaa ccaggggagaagggaactaagggcagtgcaggctttggatatcaaggaaagaagggtgat cccggcctccctgggccccctggcccccctggccctccagggcctgcaaccgaattttca gttggcaatgacggctcagttgtttcaagggcccctgcaccccggggaccagctggacca caaggtgtcccaggcccccagggaccaccgggagctgatggagagccaggtgatcctggt gaggatggaaaaactggtcctgatggacctccaggcttcccagggaccccaggtgaccca ggaaccaaaggagagaagggagaccgtggagagggtcaacctggccccaggggaccccca ggactccctggacctcccggaccaggatatagatctacctttgtggacatggaaggatca gggttccctgacttggagtctattcggggactgcctgggccaccaggcccccctggtcca cctgggcttcctggtccctctacaactggcccagcagtgagttctggggcattaggacct ccaggaaaggacggggcacccggtcaacctggtttgcctggtttaccgggtactgatggc ctcccaggaactcctggtcccaagggagaaaagggtgattcaggcgagctgggtcttcca ggagcagttggagagaagggagcttcaggaaaccctggtttaccgggacctgcaggggag cctggactggctggtctgcctggacccattggaccagttgggcaacctggacctcccggg cctcctggaccaagttatcgtgttggatttgatgacatggagggctctggtggaggtttc accaatggatttcctggcgtcagaggaccagaaggaagtcagggtcctcctggcttacct ggacttccaggtgaacctgggttgcctggcataccgggtcagaagggcactgaaggtctt gtaggaagggacgggcgaccagggttggatggcttccctggacctcagggaccaaagggt gacagaggtgacaaaggagagaggggtgactcaggtcgagatggaaatggactcccaggt ccacctggaccacctggtccacctggacaaatcatctactccacatctggcaactttgat ggagccgtcggcagtgttgggcctcagggaggacctggtttgcctggtcaggctggattc cctggtcctattggaccaaagggtgacagaggggaccctggccctcctggctacggaccg aggggtgagaaaggagagccaggcttagtaatcggacctgatggaaatcttctgtctctg gaagggttaacaggtctgaagggagacagaggaccctctgggcctgtcggaccccctggc cagtacgggcctcctggattaaagggtgaaattggaatgcctggacgacctggtcgccct ggtgtaaatggatacaagggtgagaaaggagagtcaggaggtggcgctggctatggctac ccaggagtgcctggcccaccaggaccacccggaccacccggatcccccgggccagccatt cctttagatcgcttcaatcgctatgatgaaacttcaaggaattacccagtagttaaaggg gagaaaggagagcgtggtgaccgagggcttccaggaatcccaggaacagctaattttgat atttacacattcaagaatgaactgaagggagagagtggagatccaggcgtgaagggagaa aagggagagcctggtggtggatattatgatccacgttttggaggagttcaaggcccccca gggcctcatggcaaaccaggcctgccaggtccaaaaggagattccataatgggccctgct ggaccccagggaccaccagggccaccaggcattggttacgatggacgccccggtcctcca ggaccacctggacctccaggagctccaggctctcttcctggagcatacaggcccaatcac cccgtcagtgtccctggacctcctggtcctcctggcccacctggaactcctggtctcacc tctggtgttacagttctgaggtcgtatgagacaatgattgcttctgccagacgccaggca gagggcagcctcatctacatcatcgacaaagcagacctctacttaagagtacgagatgga ctgcggcaagtcatgctcggagagtacaggcccttcttcagagatctggagaacgaggtg gcggaggtccagcctccccctgtgatcctgtacccccagtcccaggaccagtcccgcaac aacggagctggccattactcccagggtggttctgccatacgccccattgagcccccccca cacccacctgtagaccccagataccccccacagtatgatcccaggttcccagaccccaga cacacaggtcagacggacggaagattagccacccagcagactgagaacagataccctgtc actccacagagacgacccagcccacctgtcccacagcccggtgtccacgtgggcacatca gcatcaggactgcacctcatcgccttgaacgcccctcagactggtaacatgcgagggatc cgcggggcagacttcctgtgcttccagcaggctcgagctgtgggcctgaagggaaccttt agagctttcctgtcctctaagcttcaagacctctacaccatcgtccgcaggtcggacagg gacagcttccccatcttgaacctcaaggaccaagtgttgttcagcagctgggagtctatc tttggtgacaatgcaagcaaaatgagggagaatgtaccaatctactcctttgatggcaga gatatcctcagggacagcgcatggccagagaaaatggtctggcatggatcaaacaacaaa ggccaccggcaaacagaccactactgtgaaacatggcgagcaggcgaccgcgctgtgact ggtctggcatcatcgctacagagtggccacgtcctgcagcaaacctccagtagctgctcc ggctcctacatcgtcctctgcatcgagaacgccctcataacgcactccaaaaaataa

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